RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 INF2Q27J81 1249 aa17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 CTNND2Q9UQB3 1225 aa17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 FRMPD2Q68DX3 1309 aaPredicted RBP17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 CUTAO60888 179 aa17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 DOK7Q18PE1 504 aa17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 DCP1AQ9NPI6 582 aaPredicted RBP17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 TEX33O43247 280 aa17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 LIFRP42702 1097 aa17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 CACNB3P54284 484 aa17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 CCZ1BP86790 482 aa17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 CCZ1P86791 482 aaPredicted RBP17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 ENOX2Q16206 610 aaKnown RBP17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 LETM2Q2VYF4 491 aa17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 JAKMIP3Q5VZ66 844 aa17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 CNBD1Q8NA66 436 aa17.75■□□□□ 0.43
CHAF1A-201ENST00000301280 CCDC194A0A1B0GVG4 234 aa17.74■□□□□ 0.43
CHAF1A-201ENST00000301280 RILPL1Q5EBL4 403 aa17.74■□□□□ 0.43
CHAF1A-201ENST00000301280 TTC38Q5R3I4 469 aa17.74■□□□□ 0.43
CHAF1A-201ENST00000301280 USP17L2Q6R6M4 530 aa17.74■□□□□ 0.43
CHAF1A-201ENST00000301280 A0A087X0B3 334 aa17.74■□□□□ 0.43
CHAF1A-201ENST00000301280 PLCD1P51178 756 aa17.74■□□□□ 0.43
CHAF1A-201ENST00000301280 RAD51AP2Q09MP3 1159 aa17.74■□□□□ 0.43
CHAF1A-201ENST00000301280 TEX35Q5T0J7 233 aa17.74■□□□□ 0.43
CHAF1A-201ENST00000301280 TRAPPC3LQ5T215 181 aa17.74■□□□□ 0.43
CHAF1A-201ENST00000301280 ZSCAN29Q8IWY8 852 aaPredicted RBP17.74■□□□□ 0.43
CHAF1A-201ENST00000301280 STAG1Q8WVM7 1258 aa17.74■□□□□ 0.43
CHAF1A-201ENST00000301280 SMARCC1Q92922 1105 aaPredicted RBP17.74■□□□□ 0.43
CHAF1A-201ENST00000301280 GJA10Q969M2 543 aa17.74■□□□□ 0.43
CHAF1A-201ENST00000301280 MAP3K14Q99558 947 aa17.74■□□□□ 0.43
CHAF1A-201ENST00000301280 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.73■□□□□ 0.43
CHAF1A-201ENST00000301280 TCP10Q12799 353 aa17.73■□□□□ 0.43
CHAF1A-201ENST00000301280 SGMS1Q86VZ5 419 aa17.73■□□□□ 0.43
CHAF1A-201ENST00000301280 AMOTL1Q8IY63 956 aa17.73■□□□□ 0.43
CHAF1A-201ENST00000301280 PNMA1Q8ND90 353 aa17.73■□□□□ 0.43
CHAF1A-201ENST00000301280 NSUN4Q96CB9 384 aaKnown RBP17.73■□□□□ 0.43
CHAF1A-201ENST00000301280 ZHX3Q9H4I2 956 aa17.73■□□□□ 0.43
CHAF1A-201ENST00000301280 GPCPD1Q9NPB8 672 aa17.73■□□□□ 0.43
CHAF1A-201ENST00000301280 BSDC1Q9NW68 430 aaPredicted RBP17.73■□□□□ 0.43
CHAF1A-201ENST00000301280 TAB2Q9NYJ8 693 aa17.73■□□□□ 0.43
CHAF1A-201ENST00000301280 RESP18Q5W5W9 173 aa17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 E4F1Q66K89 784 aaPredicted RBP17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 LRRC47Q8N1G4 583 aaKnown RBP17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 POLD4Q9HCU8 107 aa17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 TFRCP02786 760 aaKnown RBP17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 RBM6P78332 1123 aaKnown RBP17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 GTF2IP78347 998 aa17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 NCAPHQ15003 741 aa17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 TMTC2Q8N394 836 aa17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 RIOK1Q9BRS2 568 aaKnown RBP17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 MTA3Q9BTC8 594 aa17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 STK36Q9NRP7 1315 aa17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 A0A0U1RQJ8 604 aa17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 ZBTB22O15209 634 aa17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 DNA2P51530 1060 aa17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 IKQ13123 557 aaPredicted RBP17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 SKIDA1Q1XH10 827 aa17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 PPFIBP1Q86W92 1011 aa17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 ATRIPQ8WXE1 791 aa17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 HPS3Q969F9 1004 aa17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 SHISA4Q96DD7 197 aa17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 PPP1R13BQ96KQ4 1090 aa17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 GTPBP4Q9BZE4 634 aaKnown RBP17.72■□□□□ 0.43
CHAF1A-201ENST00000301280 N4BP3O15049 544 aa17.71■□□□□ 0.43
CHAF1A-201ENST00000301280 UBE4AQ14139 1066 aa17.71■□□□□ 0.43
CHAF1A-201ENST00000301280 GDAQ9Y2T3 454 aa17.71■□□□□ 0.43
CHAF1A-201ENST00000301280 MORC2Q9Y6X9 1032 aaPredicted RBP17.71■□□□□ 0.43
CHAF1A-201ENST00000301280 PUF60Q9UHX1 559 aaKnown RBP17.71■□□□□ 0.43
CHAF1A-201ENST00000301280 FBXO2Q9UK22 296 aaPredicted RBP17.71■□□□□ 0.43
CHAF1A-201ENST00000301280 ERICH4A6NGS2 130 aa17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 ELOA2Q8IYF1 753 aaPredicted RBP17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 TEX11Q8IYF3 940 aa17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 ZNF622Q969S3 477 aaKnown RBP eCLIP17.7■□□□□ 0.421e-6■■■□□ 15.4
CHAF1A-201ENST00000301280 CARD6Q9BX69 1037 aa17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 BIN2Q9UBW5 565 aaPredicted RBP17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 TRIM37O94972 964 aa17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 IDEP14735 1019 aa17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 DUOX1Q9NRD9 1551 aa17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 SBF2Q86WG5 1849 aa17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 TRIM49BA6NDI0 452 aa17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 GSDMDP57764 484 aa17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 CCDC178Q5BJE1 867 aa17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 MFSD14BQ5SR56 506 aa17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 TIGD1Q96MW7 591 aa17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 NUP88Q99567 741 aaPredicted RBP17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 ST7Q9NRC1 585 aa17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 TFR2Q9UP52 801 aa17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 CEP131Q9UPN4 1083 aa17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 HPSEQ9Y251 543 aa17.7■□□□□ 0.42
CHAF1A-201ENST00000301280 PNPLA7Q6ZV29 1317 aa17.69■□□□□ 0.42
CHAF1A-201ENST00000301280 POLR3GO15318 223 aaPredicted RBP17.69■□□□□ 0.42
CHAF1A-201ENST00000301280 UBA7P41226 1012 aa17.69■□□□□ 0.42
CHAF1A-201ENST00000301280 NAPAP54920 295 aa17.69■□□□□ 0.42
CHAF1A-201ENST00000301280 SOWAHDA6NJG2 315 aa17.69■□□□□ 0.42
CHAF1A-201ENST00000301280 TOM1O60784 492 aa17.69■□□□□ 0.42
CHAF1A-201ENST00000301280 STAT6P42226 847 aa17.69■□□□□ 0.42
CHAF1A-201ENST00000301280 CUL4BQ13620 913 aa17.69■□□□□ 0.42
CHAF1A-201ENST00000301280 ZNF771Q7L3S4 317 aaPredicted RBP17.69■□□□□ 0.42
CHAF1A-201ENST00000301280 PTPREP23469 700 aa17.69■□□□□ 0.42
CHAF1A-201ENST00000301280 SLC16A2P36021 539 aa17.69■□□□□ 0.42
CHAF1A-201ENST00000301280 SNAP25P60880 206 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms