RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 MYO3BQ8WXR4 1341 aa13.59□□□□□ -0.23
SSRP1-201ENST00000278412 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.59□□□□□ -0.23
SSRP1-201ENST00000278412 IGKV6D-41A0A0C4DH26 115 aa13.59□□□□□ -0.23
SSRP1-201ENST00000278412 GH2P01242 217 aa13.59□□□□□ -0.23
SSRP1-201ENST00000278412 SLC16A2P36021 539 aa13.59□□□□□ -0.23
SSRP1-201ENST00000278412 GLIPR1L2Q4G1C9 344 aa13.59□□□□□ -0.23
SSRP1-201ENST00000278412 CTCFLQ8NI51 663 aaPredicted RBP13.59□□□□□ -0.23
SSRP1-201ENST00000278412 GLIS2Q9BZE0 524 aaPredicted RBP13.59□□□□□ -0.23
SSRP1-201ENST00000278412 TMEM63CQ9P1W3 806 aa13.59□□□□□ -0.23
SSRP1-201ENST00000278412 CLIC4Q9Y696 253 aa13.59□□□□□ -0.23
SSRP1-201ENST00000278412 DDAH1O94760 285 aa13.59□□□□□ -0.23
SSRP1-201ENST00000278412 HIRAP54198 1017 aaPredicted RBP13.59□□□□□ -0.23
SSRP1-201ENST00000278412 CERKLQ49MI3 558 aaPredicted RBP13.59□□□□□ -0.23
SSRP1-201ENST00000278412 KCTD1Q719H9 257 aa13.59□□□□□ -0.23
SSRP1-201ENST00000278412 HOMER1Q86YM7 354 aa13.59□□□□□ -0.23
SSRP1-201ENST00000278412 GPCPD1Q9NPB8 672 aa13.59□□□□□ -0.23
SSRP1-201ENST00000278412 RNF181Q9P0P0 153 aa13.59□□□□□ -0.23
SSRP1-201ENST00000278412 MRVI1Q9Y6F6 885 aa13.59□□□□□ -0.23
SSRP1-201ENST00000278412 MYH4Q9Y623 1939 aa13.58□□□□□ -0.23
SSRP1-201ENST00000278412 EEF2P13639 858 aaKnown RBP13.58□□□□□ -0.24
SSRP1-201ENST00000278412 ECE1P42892 770 aa13.58□□□□□ -0.24
SSRP1-201ENST00000278412 SNAP25P60880 206 aa13.58□□□□□ -0.24
SSRP1-201ENST00000278412 RASA3Q14644 834 aa13.58□□□□□ -0.24
SSRP1-201ENST00000278412 KIAA1755Q5JYT7 1200 aa13.58□□□□□ -0.24
SSRP1-201ENST00000278412 SPICE1Q8N0Z3 855 aa13.58□□□□□ -0.24
SSRP1-201ENST00000278412 PGBD1Q96JS3 809 aa13.58□□□□□ -0.24
SSRP1-201ENST00000278412 MTA3Q9BTC8 594 aa13.58□□□□□ -0.24
SSRP1-201ENST00000278412 LTBP3Q9NS15 1303 aa13.58□□□□□ -0.24
SSRP1-201ENST00000278412 TCP11L1Q9NUJ3 509 aa13.58□□□□□ -0.24
SSRP1-201ENST00000278412 PGAP2Q9UHJ9 254 aa13.58□□□□□ -0.24
SSRP1-201ENST00000278412 A0A1W2PRG0 241 aa13.58□□□□□ -0.24
SSRP1-201ENST00000278412 ATP2B1P20020 1258 aa13.58□□□□□ -0.24
SSRP1-201ENST00000278412 TNIP1Q15025 636 aa13.58□□□□□ -0.24
SSRP1-201ENST00000278412 RASGRP4Q8TDF6 673 aa13.58□□□□□ -0.24
SSRP1-201ENST00000278412 LEO1Q8WVC0 666 aaPredicted RBP13.58□□□□□ -0.24
SSRP1-201ENST00000278412 HACL1Q9UJ83 578 aa13.58□□□□□ -0.24
SSRP1-201ENST00000278412 ISY1Q9ULR0 285 aaKnown RBP13.58□□□□□ -0.24
SSRP1-201ENST00000278412 SMCHD1A6NHR9 2005 aa13.57□□□□□ -0.24
SSRP1-201ENST00000278412 PDHBP11177 359 aa13.57□□□□□ -0.24
SSRP1-201ENST00000278412 GRM4Q14833 912 aa13.57□□□□□ -0.24
SSRP1-201ENST00000278412 NPY5RQ15761 445 aa13.57□□□□□ -0.24
SSRP1-201ENST00000278412 ACER1Q8TDN7 264 aa13.57□□□□□ -0.24
SSRP1-201ENST00000278412 ANKS1AQ92625 1134 aa13.57□□□□□ -0.24
SSRP1-201ENST00000278412 VPS33BQ9H267 617 aa13.57□□□□□ -0.24
SSRP1-201ENST00000278412 MYH15Q9Y2K3 1946 aa13.57□□□□□ -0.24
SSRP1-201ENST00000278412 ATRNL1Q5VV63 1379 aa13.57□□□□□ -0.24
SSRP1-201ENST00000278412 KLRF2D3W0D1 207 aa13.57□□□□□ -0.24
SSRP1-201ENST00000278412 GOLGA6L22H0YM25 854 aa13.57□□□□□ -0.24
SSRP1-201ENST00000278412 ENTPD3O75355 529 aa13.57□□□□□ -0.24
SSRP1-201ENST00000278412 CDKL5O76039 1030 aa13.57□□□□□ -0.24
SSRP1-201ENST00000278412 ZNF280AP59817 542 aaPredicted RBP13.57□□□□□ -0.24
SSRP1-201ENST00000278412 ZYXQ15942 572 aaKnown RBP13.57□□□□□ -0.24
SSRP1-201ENST00000278412 TATDN1Q6P1N9 297 aa13.57□□□□□ -0.24
SSRP1-201ENST00000278412 CPLX2Q6PUV4 134 aaKnown RBP13.57□□□□□ -0.24
SSRP1-201ENST00000278412 GAS2L3Q86XJ1 694 aa13.57□□□□□ -0.24
SSRP1-201ENST00000278412 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.57□□□□□ -0.24
SSRP1-201ENST00000278412 GREB1LQ9C091 1923 aaPredicted RBP13.56□□□□□ -0.24
SSRP1-201ENST00000278412 LMNB1P20700 586 aa13.56□□□□□ -0.24
SSRP1-201ENST00000278412 KIF4BQ2VIQ3 1234 aa13.56□□□□□ -0.24
SSRP1-201ENST00000278412 DIS3L2Q8IYB7 885 aaKnown RBP13.56□□□□□ -0.24
SSRP1-201ENST00000278412 TRIM22Q8IYM9 498 aa13.56□□□□□ -0.24
SSRP1-201ENST00000278412 TEPSINQ96N21 525 aa13.56□□□□□ -0.24
SSRP1-201ENST00000278412 EHD4Q9H223 541 aa13.56□□□□□ -0.24
SSRP1-201ENST00000278412 DHX36Q9H2U1 1008 aaKnown RBP13.56□□□□□ -0.24
SSRP1-201ENST00000278412 TMOD2Q9NZR1 351 aa13.56□□□□□ -0.24
SSRP1-201ENST00000278412 PALM3A6NDB9 673 aaPredicted RBP13.56□□□□□ -0.24
SSRP1-201ENST00000278412 TOP1P11387 765 aaKnown RBP13.56□□□□□ -0.24
SSRP1-201ENST00000278412 LIG1P18858 919 aa13.56□□□□□ -0.24
SSRP1-201ENST00000278412 FAM151AQ8WW52 585 aa13.56□□□□□ -0.24
SSRP1-201ENST00000278412 ZNF287Q9HBT7 754 aa13.56□□□□□ -0.24
SSRP1-201ENST00000278412 DEXIO95424 95 aa13.55□□□□□ -0.24
SSRP1-201ENST00000278412 KRT85P78386 507 aa13.55□□□□□ -0.24
SSRP1-201ENST00000278412 NBPF12Q5TAG4 269 aaPredicted RBP13.55□□□□□ -0.24
SSRP1-201ENST00000278412 ANGEL2Q5VTE6 544 aaKnown RBP13.55□□□□□ -0.24
SSRP1-201ENST00000278412 SPATA32Q96LK8 384 aa13.55□□□□□ -0.24
SSRP1-201ENST00000278412 TRIM34Q9BYJ4 488 aa13.55□□□□□ -0.24
SSRP1-201ENST00000278412 TTLL1O95922 423 aa13.55□□□□□ -0.24
SSRP1-201ENST00000278412 MMP1P03956 469 aa13.55□□□□□ -0.24
SSRP1-201ENST00000278412 NOVP48745 357 aa13.55□□□□□ -0.24
SSRP1-201ENST00000278412 PRKG1Q13976 671 aa13.55□□□□□ -0.24
SSRP1-201ENST00000278412 GSE1Q14687 1217 aa13.55□□□□□ -0.24
SSRP1-201ENST00000278412 ABCB5Q2M3G0 1257 aa13.55□□□□□ -0.24
SSRP1-201ENST00000278412 C9orf131Q5VYM1 1079 aa13.55□□□□□ -0.24
SSRP1-201ENST00000278412 PIGSQ96S52 555 aa13.55□□□□□ -0.24
SSRP1-201ENST00000278412 RNF26Q9BY78 433 aaPredicted RBP13.55□□□□□ -0.24
SSRP1-201ENST00000278412 SWAP70Q9UH65 585 aa13.55□□□□□ -0.24
SSRP1-201ENST00000278412 PLIN4Q96Q06 1357 aa13.55□□□□□ -0.24
SSRP1-201ENST00000278412 CENPFP49454 3210 aa13.55□□□□□ -0.24
SSRP1-201ENST00000278412 STK36Q9NRP7 1315 aa13.55□□□□□ -0.24
SSRP1-201ENST00000278412 CCDC196A0A1B0GTZ2 297 aa13.54□□□□□ -0.24
SSRP1-201ENST00000278412 PRPF3O43395 683 aaKnown RBP13.54□□□□□ -0.24
SSRP1-201ENST00000278412 MARCKSP29966 332 aaPredicted RBP13.54□□□□□ -0.24
SSRP1-201ENST00000278412 TOB1P50616 345 aaPredicted RBP13.54□□□□□ -0.24
SSRP1-201ENST00000278412 KLHL40Q2TBA0 621 aa13.54□□□□□ -0.24
SSRP1-201ENST00000278412 MYSM1Q5VVJ2 828 aa13.54□□□□□ -0.24
SSRP1-201ENST00000278412 WWC2Q6AWC2 1192 aa13.54□□□□□ -0.24
SSRP1-201ENST00000278412 FAM43AQ8N2R8 423 aa13.54□□□□□ -0.24
SSRP1-201ENST00000278412 ICA1Q05084 483 aa13.54□□□□□ -0.24
SSRP1-201ENST00000278412 SAMD1Q6SPF0 538 aaPredicted RBP13.54□□□□□ -0.24
SSRP1-201ENST00000278412 MTMR14Q8NCE2 650 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms