RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 CROCCP2Q86T23 111 aa16.49■□□□□ 0.23
PDPK1-201ENST00000268673 SLAIN2Q9P270 581 aa16.49■□□□□ 0.23
PDPK1-201ENST00000268673 SAMM50Q9Y512 469 aa16.49■□□□□ 0.23
PDPK1-201ENST00000268673 SOWAHDA6NJG2 315 aa16.49■□□□□ 0.23
PDPK1-201ENST00000268673 PARP10Q53GL7 1025 aa16.49■□□□□ 0.23
PDPK1-201ENST00000268673 ITGA6P23229 1130 aa16.49■□□□□ 0.23
PDPK1-201ENST00000268673 GNA11P29992 359 aa16.49■□□□□ 0.23
PDPK1-201ENST00000268673 CCDC6Q16204 474 aa16.49■□□□□ 0.23
PDPK1-201ENST00000268673 ARMCX5Q6P1M9 558 aa16.49■□□□□ 0.23
PDPK1-201ENST00000268673 NYAP1Q6ZVC0 841 aa16.49■□□□□ 0.23
PDPK1-201ENST00000268673 HDAC9Q9UKV0 1011 aa16.49■□□□□ 0.23
PDPK1-201ENST00000268673 IQGAP1P46940 1657 aa16.49■□□□□ 0.23
PDPK1-201ENST00000268673 DESP17661 470 aa16.48■□□□□ 0.23
PDPK1-201ENST00000268673 PTPN21Q16825 1174 aa16.48■□□□□ 0.23
PDPK1-201ENST00000268673 AKNAD1Q5T1N1 836 aa16.48■□□□□ 0.23
PDPK1-201ENST00000268673 PLCG2P16885 1265 aa16.48■□□□□ 0.23
PDPK1-201ENST00000268673 TRAPPC3LQ5T215 181 aa16.48■□□□□ 0.23
PDPK1-201ENST00000268673 HOOK3Q86VS8 718 aa16.48■□□□□ 0.23
PDPK1-201ENST00000268673 FBF1Q8TES7 1133 aa16.48■□□□□ 0.23
PDPK1-201ENST00000268673 NAP1L3Q99457 506 aaPredicted RBP16.48■□□□□ 0.23
PDPK1-201ENST00000268673 A0A1W2PRG0 241 aa16.48■□□□□ 0.23
PDPK1-201ENST00000268673 BUB1BO60566 1050 aaPredicted RBP16.48■□□□□ 0.23
PDPK1-201ENST00000268673 LDHBP07195 334 aaKnown RBP16.48■□□□□ 0.23
PDPK1-201ENST00000268673 VIMP08670 466 aaKnown RBP16.48■□□□□ 0.23
PDPK1-201ENST00000268673 TRAF1Q13077 416 aa16.48■□□□□ 0.23
PDPK1-201ENST00000268673 RAPGEF1Q13905 1077 aa16.48■□□□□ 0.23
PDPK1-201ENST00000268673 DNAJC10Q8IXB1 793 aa16.48■□□□□ 0.23
PDPK1-201ENST00000268673 NUCKS1Q9H1E3 243 aaKnown RBP16.48■□□□□ 0.23
PDPK1-201ENST00000268673 JAG2Q9Y219 1238 aa16.48■□□□□ 0.23
PDPK1-201ENST00000268673 GTPBP6O43824 516 aaPredicted RBP16.48■□□□□ 0.23
PDPK1-201ENST00000268673 TSGA10IPQ3SY00 556 aa16.48■□□□□ 0.23
PDPK1-201ENST00000268673 MMS22LQ6ZRQ5 1243 aa16.48■□□□□ 0.23
PDPK1-201ENST00000268673 ARMT1Q9H993 441 aa16.48■□□□□ 0.23
PDPK1-201ENST00000268673 EIF3CLB5ME19 914 aaKnown RBP16.47■□□□□ 0.23
PDPK1-201ENST00000268673 EIF3CQ99613 913 aaKnown RBP16.47■□□□□ 0.23
PDPK1-201ENST00000268673 ST7Q9NRC1 585 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 YEATS2Q9ULM3 1422 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 ATP1A2P50993 1020 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 MAP3K9P80192 1104 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 CERS3Q8IU89 383 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 FUCA2Q9BTY2 467 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 ZNF532Q9HCE3 1301 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 QRICH2Q9H0J4 1663 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 TBCAO75347 108 aaKnown RBP16.47■□□□□ 0.23
PDPK1-201ENST00000268673 FMNL3Q8IVF7 1028 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 FOXP1Q9H334 677 aaPredicted RBP16.47■□□□□ 0.23
PDPK1-201ENST00000268673 MAST3O60307 1309 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 TRAF5O00463 557 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 C6orf163Q5TEZ5 329 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 MCTP2Q6DN12 878 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 TYW1BQ6NUM6 668 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 TADA2BQ86TJ2 420 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 ERMNQ8TAM6 284 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 PPANQ9NQ55 473 aaKnown RBP16.47■□□□□ 0.23
PDPK1-201ENST00000268673 SAMSN1Q9NSI8 373 aaKnown RBP16.47■□□□□ 0.23
PDPK1-201ENST00000268673 NEO1Q92859 1461 aa16.47■□□□□ 0.23
PDPK1-201ENST00000268673 SMIM23A6NLE4 172 aa16.46■□□□□ 0.23
PDPK1-201ENST00000268673 CACNA2D3Q8IZS8 1091 aa16.46■□□□□ 0.23
PDPK1-201ENST00000268673 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.46■□□□□ 0.23
PDPK1-201ENST00000268673 VPS54Q9P1Q0 977 aa16.46■□□□□ 0.23
PDPK1-201ENST00000268673 UTP11Q9Y3A2 253 aaKnown RBP16.46■□□□□ 0.23
PDPK1-201ENST00000268673 MRFAP1Q9Y605 127 aa16.46■□□□□ 0.23
PDPK1-201ENST00000268673 EPHB4P54760 987 aa16.46■□□□□ 0.23
PDPK1-201ENST00000268673 CTDSPL2Q05D32 466 aa16.46■□□□□ 0.23
PDPK1-201ENST00000268673 APOA5Q6Q788 366 aa16.46■□□□□ 0.23
PDPK1-201ENST00000268673 C2CD5Q86YS7 1000 aa16.46■□□□□ 0.23
PDPK1-201ENST00000268673 RIMBP2O15034 1052 aa16.46■□□□□ 0.23
PDPK1-201ENST00000268673 SLC8A1P32418 973 aa16.46■□□□□ 0.23
PDPK1-201ENST00000268673 RNASE9P60153 205 aaKnown RBP16.46■□□□□ 0.23
PDPK1-201ENST00000268673 ZNF654Q8IZM8 581 aa16.46■□□□□ 0.23
PDPK1-201ENST00000268673 PARP3Q9Y6F1 533 aa16.46■□□□□ 0.23
PDPK1-201ENST00000268673 CEP152O94986 1710 aa16.46■□□□□ 0.22
PDPK1-201ENST00000268673 GLI2P10070 1586 aa16.46■□□□□ 0.22
PDPK1-201ENST00000268673 ENC1O14682 589 aa16.45■□□□□ 0.22
PDPK1-201ENST00000268673 CLGNO14967 610 aa16.45■□□□□ 0.22
PDPK1-201ENST00000268673 ACTN4O43707 911 aaKnown RBP16.45■□□□□ 0.22
PDPK1-201ENST00000268673 PDE8AO60658 829 aa16.45■□□□□ 0.22
PDPK1-201ENST00000268673 SETDB1Q15047 1291 aa16.45■□□□□ 0.22
PDPK1-201ENST00000268673 PNMA8AQ86V59 439 aaPredicted RBP16.45■□□□□ 0.22
PDPK1-201ENST00000268673 KLHL7Q8IXQ5 586 aa16.45■□□□□ 0.22
PDPK1-201ENST00000268673 RPS6KA1Q15418 735 aa16.45■□□□□ 0.22
PDPK1-201ENST00000268673 ARHGEF25Q86VW2 580 aa16.45■□□□□ 0.22
PDPK1-201ENST00000268673 ACRBPQ8NEB7 543 aa16.45■□□□□ 0.22
PDPK1-201ENST00000268673 TRIM7Q9C029 511 aa16.45■□□□□ 0.22
PDPK1-201ENST00000268673 CCNL1Q9UK58 526 aaPredicted RBP16.45■□□□□ 0.22
PDPK1-201ENST00000268673 ATP11AP98196 1134 aa16.45■□□□□ 0.22
PDPK1-201ENST00000268673 PUM3Q15397 648 aaKnown RBP16.45■□□□□ 0.22
PDPK1-201ENST00000268673 PROSER3Q2NL68 480 aa16.45■□□□□ 0.22
PDPK1-201ENST00000268673 TOGARAM2Q6ZUX3 1019 aa16.45■□□□□ 0.22
PDPK1-201ENST00000268673 ZBTB22O15209 634 aa16.45■□□□□ 0.22
PDPK1-201ENST00000268673 SYCP3Q8IZU3 236 aa16.45■□□□□ 0.22
PDPK1-201ENST00000268673 USP42Q9H9J4 1324 aaKnown RBP16.44■□□□□ 0.22
PDPK1-201ENST00000268673 CEP104O60308 925 aa16.44■□□□□ 0.22
PDPK1-201ENST00000268673 MED23Q9ULK4 1368 aa16.44■□□□□ 0.22
PDPK1-201ENST00000268673 KRT71Q3SY84 523 aa16.44■□□□□ 0.22
PDPK1-201ENST00000268673 SRLQ86TD4 932 aa16.44■□□□□ 0.22
PDPK1-201ENST00000268673 CNBD1Q8NA66 436 aa16.44■□□□□ 0.22
PDPK1-201ENST00000268673 FANCBQ8NB91 859 aa16.44■□□□□ 0.22
PDPK1-201ENST00000268673 BAIAP2L1Q9UHR4 511 aa16.44■□□□□ 0.22
PDPK1-201ENST00000268673 DENND2AQ9ULE3 1009 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms