RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 NAPBQ9H115 298 aa25.25■■□□□ 1.63
HCFC1R1-201ENST00000248089 RLFQ13129 1914 aa25.25■■□□□ 1.63
HCFC1R1-201ENST00000248089 A0A0G2JMZ2 1700 aa25.24■■□□□ 1.63
HCFC1R1-201ENST00000248089 RASA1P20936 1047 aa25.24■■□□□ 1.63
HCFC1R1-201ENST00000248089 KIAA1755Q5JYT7 1200 aa25.24■■□□□ 1.63
HCFC1R1-201ENST00000248089 POTEEQ6S8J3 1075 aa25.24■■□□□ 1.63
HCFC1R1-201ENST00000248089 SIAH1Q8IUQ4 282 aa25.24■■□□□ 1.63
HCFC1R1-201ENST00000248089 SPICE1Q8N0Z3 855 aa25.24■■□□□ 1.63
HCFC1R1-201ENST00000248089 CWC22Q9HCG8 908 aaKnown RBP25.24■■□□□ 1.63
HCFC1R1-201ENST00000248089 TMX2Q9Y320 296 aa25.24■■□□□ 1.63
HCFC1R1-201ENST00000248089 CCL5P13501 91 aa25.23■■□□□ 1.63
HCFC1R1-201ENST00000248089 EEF2P13639 858 aaKnown RBP25.23■■□□□ 1.63
HCFC1R1-201ENST00000248089 Q3C1V9 767 aa25.23■■□□□ 1.63
HCFC1R1-201ENST00000248089 PORCNQ9H237 461 aa25.23■■□□□ 1.63
HCFC1R1-201ENST00000248089 KANSL2Q9H9L4 492 aa25.23■■□□□ 1.63
HCFC1R1-201ENST00000248089 RABGAP1Q9Y3P9 1069 aa25.23■■□□□ 1.63
HCFC1R1-201ENST00000248089 SPDYE16A6NNV3 312 aaPredicted RBP25.22■■□□□ 1.63
HCFC1R1-201ENST00000248089 RAD21O60216 631 aa25.22■■□□□ 1.63
HCFC1R1-201ENST00000248089 PRDM1O75626 825 aa25.22■■□□□ 1.63
HCFC1R1-201ENST00000248089 CNMDO75829 334 aa25.22■■□□□ 1.63
HCFC1R1-201ENST00000248089 INHAP05111 366 aa25.22■■□□□ 1.63
HCFC1R1-201ENST00000248089 MAPK4P31152 587 aa25.22■■□□□ 1.63
HCFC1R1-201ENST00000248089 PXYLP1Q8TE99 480 aa25.22■■□□□ 1.63
HCFC1R1-201ENST00000248089 LPAR1Q92633 364 aa25.22■■□□□ 1.63
HCFC1R1-201ENST00000248089 RILPL2Q969X0 211 aa25.22■■□□□ 1.63
HCFC1R1-201ENST00000248089 VCPKMTQ9H867 229 aa25.22■■□□□ 1.63
HCFC1R1-201ENST00000248089 COL11A1P12107 1806 aaPredicted RBP25.21■■□□□ 1.63
HCFC1R1-201ENST00000248089 WDR78Q5VTH9 848 aa25.21■■□□□ 1.63
HCFC1R1-201ENST00000248089 SAMD1Q6SPF0 538 aaPredicted RBP25.21■■□□□ 1.63
HCFC1R1-201ENST00000248089 RNF208Q9H0X6 261 aa25.21■■□□□ 1.63
HCFC1R1-201ENST00000248089 ZNF287Q9HBT7 754 aa25.21■■□□□ 1.63
HCFC1R1-201ENST00000248089 CCNA1P78396 465 aa25.2■■□□□ 1.62
HCFC1R1-201ENST00000248089 PLEKHM2Q8IWE5 1019 aa25.2■■□□□ 1.62
HCFC1R1-201ENST00000248089 FAM227BQ96M60 508 aa25.2■■□□□ 1.62
HCFC1R1-201ENST00000248089 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.2■■□□□ 1.62
HCFC1R1-201ENST00000248089 UNC93B1Q9H1C4 597 aa25.2■■□□□ 1.62
HCFC1R1-201ENST00000248089 GOPCQ9HD26 462 aa25.2■■□□□ 1.62
HCFC1R1-201ENST00000248089 GJD2Q9UKL4 321 aa25.2■■□□□ 1.62
HCFC1R1-201ENST00000248089 A0A0D9SFI3 127 aa25.19■■□□□ 1.62
HCFC1R1-201ENST00000248089 FLOT1O75955 427 aa25.19■■□□□ 1.62
HCFC1R1-201ENST00000248089 SLC3A2P08195 630 aaKnown RBP25.19■■□□□ 1.62
HCFC1R1-201ENST00000248089 CYP2B6P20813 491 aa25.19■■□□□ 1.62
HCFC1R1-201ENST00000248089 PPARAQ07869 468 aa25.19■■□□□ 1.62
HCFC1R1-201ENST00000248089 COG2Q14746 738 aa25.19■■□□□ 1.62
HCFC1R1-201ENST00000248089 LBX2Q6XYB7 198 aa25.19■■□□□ 1.62
HCFC1R1-201ENST00000248089 GPR142Q7Z601 462 aa25.19■■□□□ 1.62
HCFC1R1-201ENST00000248089 ZNF444Q8N0Y2 327 aaPredicted RBP25.19■■□□□ 1.62
HCFC1R1-201ENST00000248089 SOCS4Q8WXH5 440 aa25.19■■□□□ 1.62
HCFC1R1-201ENST00000248089 NUDT12Q9BQG2 462 aa25.19■■□□□ 1.62
HCFC1R1-201ENST00000248089 HELLSQ9NRZ9 838 aa25.19■■□□□ 1.62
HCFC1R1-201ENST00000248089 BTBD7Q9P203 1132 aa25.19■■□□□ 1.62
HCFC1R1-201ENST00000248089 WDR46O15213 610 aaKnown RBP25.18■■□□□ 1.62
HCFC1R1-201ENST00000248089 FOXP2O15409 715 aa25.18■■□□□ 1.62
HCFC1R1-201ENST00000248089 PDE4BQ07343 736 aa25.18■■□□□ 1.62
HCFC1R1-201ENST00000248089 VPS53Q5VIR6 699 aa25.18■■□□□ 1.62
HCFC1R1-201ENST00000248089 PLEKHH3Q7Z736 793 aa25.18■■□□□ 1.62
HCFC1R1-201ENST00000248089 NMIQ13287 307 aaPredicted RBP25.17■■□□□ 1.62
HCFC1R1-201ENST00000248089 HOXC10Q9NYD6 342 aa25.17■■□□□ 1.62
HCFC1R1-201ENST00000248089 HMGCRP04035 888 aa25.16■■□□□ 1.62
HCFC1R1-201ENST00000248089 MCMDC2Q4G0Z9 681 aa25.16■■□□□ 1.62
HCFC1R1-201ENST00000248089 SHISA4Q96DD7 197 aa25.16■■□□□ 1.62
HCFC1R1-201ENST00000248089 OSBPL3Q9H4L5 887 aa25.16■■□□□ 1.62
HCFC1R1-201ENST00000248089 GJB1P08034 283 aa25.15■■□□□ 1.62
HCFC1R1-201ENST00000248089 ATG4CQ96DT6 458 aa25.15■■□□□ 1.62
HCFC1R1-201ENST00000248089 TSPY3P0CV98 308 aa25.14■■□□□ 1.62
HCFC1R1-201ENST00000248089 TSPY8P0CW00 308 aa25.14■■□□□ 1.62
HCFC1R1-201ENST00000248089 DSG3P32926 999 aa25.14■■□□□ 1.62
HCFC1R1-201ENST00000248089 CTDSPL2Q05D32 466 aa25.14■■□□□ 1.62
HCFC1R1-201ENST00000248089 FAM47AQ5JRC9 791 aa25.14■■□□□ 1.62
HCFC1R1-201ENST00000248089 FAM83BQ5T0W9 1011 aa25.14■■□□□ 1.62
HCFC1R1-201ENST00000248089 ZNF589Q86UQ0 364 aaPredicted RBP25.14■■□□□ 1.62
HCFC1R1-201ENST00000248089 NKX2-3Q8TAU0 364 aa25.14■■□□□ 1.62
HCFC1R1-201ENST00000248089 TRIB2Q92519 343 aa25.14■■□□□ 1.62
HCFC1R1-201ENST00000248089 NYAP2Q9P242 653 aa25.14■■□□□ 1.62
HCFC1R1-201ENST00000248089 IVNS1ABPQ9Y6Y0 642 aa25.14■■□□□ 1.62
HCFC1R1-201ENST00000248089 RGS2P41220 211 aa25.13■■□□□ 1.61
HCFC1R1-201ENST00000248089 GJA8P48165 433 aa25.13■■□□□ 1.61
HCFC1R1-201ENST00000248089 TRIM32Q13049 653 aa25.13■■□□□ 1.61
HCFC1R1-201ENST00000248089 PLS1Q14651 629 aa25.13■■□□□ 1.61
HCFC1R1-201ENST00000248089 MORN1Q5T089 497 aa25.13■■□□□ 1.61
HCFC1R1-201ENST00000248089 TICAM2Q86XR7 235 aa25.13■■□□□ 1.61
HCFC1R1-201ENST00000248089 U2AF1L4Q8WU68 220 aaKnown RBP25.13■■□□□ 1.61
HCFC1R1-201ENST00000248089 CEP95Q96GE4 821 aa25.13■■□□□ 1.61
HCFC1R1-201ENST00000248089 NUP88Q99567 741 aaPredicted RBP25.13■■□□□ 1.61
HCFC1R1-201ENST00000248089 FBXO28Q9NVF7 368 aa25.13■■□□□ 1.61
HCFC1R1-201ENST00000248089 CLIP2Q9UDT6 1046 aa25.13■■□□□ 1.61
HCFC1R1-201ENST00000248089 PLIN4Q96Q06 1357 aa25.13■■□□□ 1.61
HCFC1R1-201ENST00000248089 CCDC171Q6TFL3 1326 aa25.12■■□□□ 1.61
HCFC1R1-201ENST00000248089 IGKV6D-41A0A0C4DH26 115 aa25.12■■□□□ 1.61
HCFC1R1-201ENST00000248089 ZKSCAN1P17029 563 aaPredicted RBP25.12■■□□□ 1.61
HCFC1R1-201ENST00000248089 SDSP20132 328 aa25.12■■□□□ 1.61
HCFC1R1-201ENST00000248089 MB21D1Q8N884 522 aa25.12■■□□□ 1.61
HCFC1R1-201ENST00000248089 DEFB118Q96PH6 123 aa25.12■■□□□ 1.61
HCFC1R1-201ENST00000248089 APBA2Q99767 749 aa25.12■■□□□ 1.61
HCFC1R1-201ENST00000248089 MOV10L1Q9BXT6 1211 aaKnown RBP25.12■■□□□ 1.61
HCFC1R1-201ENST00000248089 SPATC1LQ9H0A9 340 aa25.12■■□□□ 1.61
HCFC1R1-201ENST00000248089 ZNF236Q9UL36 1845 aa25.12■■□□□ 1.61
HCFC1R1-201ENST00000248089 TFAP4Q01664 338 aa25.11■■□□□ 1.61
HCFC1R1-201ENST00000248089 LRRC47Q8N1G4 583 aaKnown RBP25.11■■□□□ 1.61
HCFC1R1-201ENST00000248089 USP6NLQ92738 828 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms