RNA–Protein interactions for RNA: ENST00000247182.6

SIX1-201, Transcript of SIX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX1, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-201ENST00000247182 NBPF14Q5TI25 921 aa11.17□□□□□ -0.62
SIX1-201ENST00000247182 NBPF10Q6P3W6 841 aaKnown RBP11.17□□□□□ -0.62
SIX1-201ENST00000247182 BICDL1Q6ZP65 573 aa11.17□□□□□ -0.62
SIX1-201ENST00000247182 NBPF15Q8N660 670 aa11.17□□□□□ -0.62
SIX1-201ENST00000247182 UBLCP1Q8WVY7 318 aaPredicted RBP11.17□□□□□ -0.62
SIX1-201ENST00000247182 CCDC47Q96A33 483 aaKnown RBP11.17□□□□□ -0.62
SIX1-201ENST00000247182 ALS2CR12Q96Q35 445 aa11.17□□□□□ -0.62
SIX1-201ENST00000247182 CTAGE1Q96RT6 745 aa11.17□□□□□ -0.62
SIX1-201ENST00000247182 TACC1O75410 805 aa11.17□□□□□ -0.62
SIX1-201ENST00000247182 PRDM1O75626 825 aa11.17□□□□□ -0.62
SIX1-201ENST00000247182 CDKL5O76039 1030 aa11.17□□□□□ -0.62
SIX1-201ENST00000247182 CHRM1P11229 460 aaPredicted RBP11.17□□□□□ -0.62
SIX1-201ENST00000247182 CASP1P29466 404 aa11.17□□□□□ -0.62
SIX1-201ENST00000247182 GUCY1A3Q02108 690 aa11.17□□□□□ -0.62
SIX1-201ENST00000247182 TRIM65Q6PJ69 517 aa11.17□□□□□ -0.62
SIX1-201ENST00000247182 CYP26C1Q6V0L0 522 aa11.17□□□□□ -0.62
SIX1-201ENST00000247182 TMTC1Q8IUR5 882 aa11.17□□□□□ -0.62
SIX1-201ENST00000247182 SLC12A7Q9Y666 1083 aa11.17□□□□□ -0.62
SIX1-201ENST00000247182 CARMIL3Q8ND23 1372 aa11.17□□□□□ -0.62
SIX1-201ENST00000247182 PXDNQ92626 1479 aa11.17□□□□□ -0.62
SIX1-201ENST00000247182 ERBB3P21860 1342 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 CEMIPQ8WUJ3 1361 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 VPS37DQ86XT2 251 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 DNAJC10Q8IXB1 793 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 DCAF5Q96JK2 942 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 CCDC42Q96M95 316 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 CCDC43Q96MW1 224 aaKnown RBP11.16□□□□□ -0.62
SIX1-201ENST00000247182 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.16□□□□□ -0.62
SIX1-201ENST00000247182 GOLGA8KD6RF30 607 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 ZBTB43O43298 467 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 GCFC2P16383 781 aaKnown RBP11.16□□□□□ -0.62
SIX1-201ENST00000247182 ERCC3P19447 782 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 KRT40Q6A162 431 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 CACNA2D3Q8IZS8 1091 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 NAA15Q9BXJ9 866 aaKnown RBP11.16□□□□□ -0.62
SIX1-201ENST00000247182 LRP2BPQ9P2M1 347 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 WWC3Q9ULE0 1092 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 TMCO5BA8MYB1 307 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 MEFVO15553 781 aaPredicted RBP11.16□□□□□ -0.62
SIX1-201ENST00000247182 MTIF2P46199 727 aaKnown RBP11.16□□□□□ -0.62
SIX1-201ENST00000247182 SEC24CP53992 1094 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 ZMYM1Q5SVZ6 1142 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 ATL3Q6DD88 541 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 ZCRB1Q8TBF4 217 aaKnown RBP11.16□□□□□ -0.62
SIX1-201ENST00000247182 CARD10Q9BWT7 1032 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 NUCKS1Q9H1E3 243 aaKnown RBP11.16□□□□□ -0.62
SIX1-201ENST00000247182 ARMT1Q9H993 441 aa11.16□□□□□ -0.62
SIX1-201ENST00000247182 FDPSP14324 419 aaKnown RBP11.15□□□□□ -0.62
SIX1-201ENST00000247182 HSPA2P54652 639 aa11.15□□□□□ -0.62
SIX1-201ENST00000247182 KRT83P78385 493 aa11.15□□□□□ -0.62
SIX1-201ENST00000247182 ANKRD13CQ8N6S4 541 aa11.15□□□□□ -0.62
SIX1-201ENST00000247182 LINC00301Q8NCQ3 95 aa11.15□□□□□ -0.62
SIX1-201ENST00000247182 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.15□□□□□ -0.62
SIX1-201ENST00000247182 USP42Q9H9J4 1324 aaKnown RBP11.15□□□□□ -0.62
SIX1-201ENST00000247182 PEAK1Q9H792 1746 aa11.15□□□□□ -0.62
SIX1-201ENST00000247182 RANBP1P43487 201 aa11.15□□□□□ -0.62
SIX1-201ENST00000247182 MXRA7P84157 204 aa11.15□□□□□ -0.62
SIX1-201ENST00000247182 CACNA2D4Q7Z3S7 1137 aa11.15□□□□□ -0.62
SIX1-201ENST00000247182 SMYD4Q8IYR2 804 aaPredicted RBP11.15□□□□□ -0.62
SIX1-201ENST00000247182 FMR1NBQ8N0W7 255 aaPredicted RBP11.15□□□□□ -0.62
SIX1-201ENST00000247182 COG1Q8WTW3 980 aa11.15□□□□□ -0.62
SIX1-201ENST00000247182 HELLSQ9NRZ9 838 aa11.15□□□□□ -0.62
SIX1-201ENST00000247182 TMOD3Q9NYL9 352 aa11.15□□□□□ -0.62
SIX1-201ENST00000247182 MED23Q9ULK4 1368 aa11.15□□□□□ -0.62
SIX1-201ENST00000247182 BTBD18B2RXH4 712 aa11.15□□□□□ -0.63
SIX1-201ENST00000247182 IKBKBO14920 756 aa11.15□□□□□ -0.63
SIX1-201ENST00000247182 CDC25CP30307 473 aa11.15□□□□□ -0.63
SIX1-201ENST00000247182 RFX5P48382 616 aaPredicted RBP11.15□□□□□ -0.63
SIX1-201ENST00000247182 IRX1P78414 480 aaPredicted RBP11.15□□□□□ -0.63
SIX1-201ENST00000247182 TBC1D1Q86TI0 1168 aaPredicted RBP11.15□□□□□ -0.63
SIX1-201ENST00000247182 SERTAD1Q9UHV2 236 aa11.15□□□□□ -0.63
SIX1-201ENST00000247182 CTNND2Q9UQB3 1225 aa11.15□□□□□ -0.63
SIX1-201ENST00000247182 CLSTN1O94985 981 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 POSTNQ15063 836 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 ATG9AQ7Z3C6 839 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 BRAPQ7Z569 592 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 KLHL7Q8IXQ5 586 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 MAGEB6Q8N7X4 407 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 MIEF2Q96C03 454 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 TRIM47Q96LD4 638 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 RANBP6O60518 1105 aaKnown RBP11.14□□□□□ -0.63
SIX1-201ENST00000247182 ITGA6P23229 1130 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 MMP14P50281 582 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 ARID5AQ03989 594 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 PRPF4BQ13523 1007 aaKnown RBP11.14□□□□□ -0.63
SIX1-201ENST00000247182 CCDC6Q16204 474 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 PTPROQ16827 1216 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 CAPRIN2Q6IMN6 1127 aaKnown RBP11.14□□□□□ -0.63
SIX1-201ENST00000247182 KSR1Q8IVT5 923 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 PARP9Q8IXQ6 854 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 PLIN2Q99541 437 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 SH3GL3Q99963 347 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 HAUS2Q9NVX0 235 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 ADGRG1Q9Y653 693 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 REREQ9P2R6 1566 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 PRKAB2O43741 272 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 XBP1P17861 261 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 POLE2P56282 527 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 CCDC24Q8N4L8 307 aa11.14□□□□□ -0.63
SIX1-201ENST00000247182 KRI1Q8N9T8 703 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms