RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 TMED1Q13445 227 aa9.4□□□□□ -0.9
SPARC-201ENST00000231061 LBRQ14739 615 aaKnown RBP9.4□□□□□ -0.9
SPARC-201ENST00000231061 MGARPQ8TDB4 240 aa9.4□□□□□ -0.9
SPARC-201ENST00000231061 ANKRD49Q8WVL7 239 aa9.4□□□□□ -0.9
SPARC-201ENST00000231061 MRPL42Q9Y6G3 142 aaKnown RBP9.4□□□□□ -0.9
SPARC-201ENST00000231061 RGPD8O14715 1765 aaPredicted RBP9.4□□□□□ -0.9
SPARC-201ENST00000231061 NFX1Q12986 1120 aaKnown RBP9.4□□□□□ -0.9
SPARC-201ENST00000231061 WTAPQ15007 396 aa9.4□□□□□ -0.9
SPARC-201ENST00000231061 PTPN14Q15678 1187 aa9.4□□□□□ -0.9
SPARC-201ENST00000231061 CWF19L2Q2TBE0 894 aaKnown RBP9.4□□□□□ -0.9
SPARC-201ENST00000231061 RUFY3Q7L099 469 aa9.4□□□□□ -0.9
SPARC-201ENST00000231061 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.4□□□□□ -0.9
SPARC-201ENST00000231061 TANGO6Q9C0B7 1094 aa9.4□□□□□ -0.9
SPARC-201ENST00000231061 PLSCR2Q9NRY7 297 aa9.4□□□□□ -0.9
SPARC-201ENST00000231061 PDRG1Q9NUG6 133 aa9.4□□□□□ -0.9
SPARC-201ENST00000231061 XRN1Q8IZH2 1706 aaKnown RBP9.4□□□□□ -0.91
SPARC-201ENST00000231061 F8W031 263 aaPredicted RBP9.4□□□□□ -0.91
SPARC-201ENST00000231061 ZMYND10O75800 440 aa9.4□□□□□ -0.91
SPARC-201ENST00000231061 CAVIN2O95810 425 aa9.4□□□□□ -0.91
SPARC-201ENST00000231061 IBSPP21815 317 aaPredicted RBP9.4□□□□□ -0.91
SPARC-201ENST00000231061 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.4□□□□□ -0.91
SPARC-201ENST00000231061 SIL1Q9H173 461 aa9.4□□□□□ -0.91
SPARC-201ENST00000231061 CTNNA3Q9UI47 895 aa9.4□□□□□ -0.91
SPARC-201ENST00000231061 TSPY2A6NKD2 308 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 TSPY3P0CV98 308 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 TSPY8P0CW00 308 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 PCNAP12004 261 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 SYT1P21579 422 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 TSPY1Q01534 308 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 MRPL28Q13084 256 aaKnown RBP9.39□□□□□ -0.91
SPARC-201ENST00000231061 GOLGA1Q92805 767 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 PTPRHQ9HD43 1115 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 FANCFQ9NPI8 374 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 ECHDC1Q9NTX5 307 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 DBF4Q9UBU7 674 aaPredicted RBP9.39□□□□□ -0.91
SPARC-201ENST00000231061 RPAP1Q9BWH6 1393 aaPredicted RBP9.39□□□□□ -0.91
SPARC-201ENST00000231061 ANKARQ7Z5J8 1434 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 LARGE1O95461 756 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 GJB2P29033 226 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 PTH1RQ03431 593 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 PAK2Q13177 524 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 SHROOM1Q2M3G4 852 aaPredicted RBP9.39□□□□□ -0.91
SPARC-201ENST00000231061 PROSER3Q2NL68 480 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 MUM1L1Q5H9M0 696 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 AKAP4Q5JQC9 854 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 CCDC183Q5T5S1 534 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 PDXDC1Q6P996 788 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 PODNQ7Z5L7 613 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 FILIP1Q7Z7B0 1213 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 SUN5Q8TC36 379 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 CYP46A1Q9Y6A2 500 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 C19orf81C9J6K1 198 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 PRC1O43663 620 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 HARSP12081 509 aaKnown RBP9.39□□□□□ -0.91
SPARC-201ENST00000231061 GCFC2P16383 781 aaKnown RBP9.39□□□□□ -0.91
SPARC-201ENST00000231061 SFSWAPQ12872 951 aaKnown RBP9.39□□□□□ -0.91
SPARC-201ENST00000231061 G3BP1Q13283 466 aaKnown RBP eCLIP9.39□□□□□ -0.91
SPARC-201ENST00000231061 WASHC4Q2M389 1173 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 Q3C1V9 767 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 JAZF1Q86VZ6 243 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 FNBP4Q8N3X1 1017 aaPredicted RBP9.39□□□□□ -0.91
SPARC-201ENST00000231061 TNIP2Q8NFZ5 429 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 CCDC8Q9H0W5 538 aaPredicted RBP9.39□□□□□ -0.91
SPARC-201ENST00000231061 QTRT2Q9H974 415 aaKnown RBP9.39□□□□□ -0.91
SPARC-201ENST00000231061 HELLSQ9NRZ9 838 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 ATP6V1DQ9Y5K8 247 aa9.39□□□□□ -0.91
SPARC-201ENST00000231061 TTC41PQ6P2S7 1318 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 F13A1P00488 732 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 ZKSCAN1P17029 563 aaPredicted RBP9.38□□□□□ -0.91
SPARC-201ENST00000231061 MYBPC3Q14896 1274 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 KIAA0753Q2KHM9 967 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 APPL2Q8NEU8 664 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 TTC14Q96N46 770 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 LRRC37A3O60309 1634 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 NWD1Q149M9 1564 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 ADCY9O60503 1353 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 PRAMEF22A3QJZ6 481 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 HOXB7P09629 217 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 HCLS1P14317 486 aaPredicted RBP9.38□□□□□ -0.91
SPARC-201ENST00000231061 HOXC13P31276 330 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 TXLNBQ8N3L3 684 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 NECAB1Q8N987 351 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 SPDYE1Q8NFV5 336 aaPredicted RBP9.38□□□□□ -0.91
SPARC-201ENST00000231061 PPM1EQ8WY54 764 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 JPH2Q9BR39 696 aaPredicted RBP9.38□□□□□ -0.91
SPARC-201ENST00000231061 ABCF3Q9NUQ8 709 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.38□□□□□ -0.91
SPARC-201ENST00000231061 RABGAP1Q9Y3P9 1069 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 MAGED1Q9Y5V3 778 aaPredicted RBP9.38□□□□□ -0.91
SPARC-201ENST00000231061 CEMIPQ8WUJ3 1361 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 NF2P35240 595 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 ADCK5Q3MIX3 580 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 ERC1Q8IUD2 1116 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 ZSWIM4Q9H7M6 989 aa9.38□□□□□ -0.91
SPARC-201ENST00000231061 RNMTO43148 476 aaKnown RBP9.37□□□□□ -0.91
SPARC-201ENST00000231061 BPIFB3P59826 476 aa9.37□□□□□ -0.91
SPARC-201ENST00000231061 TAF11Q15544 211 aa9.37□□□□□ -0.91
SPARC-201ENST00000231061 ODR4Q5SWX8 454 aa9.37□□□□□ -0.91
SPARC-201ENST00000231061 GALNT17Q6IS24 598 aa9.37□□□□□ -0.91
SPARC-201ENST00000231061 MICALCLQ6ZW33 695 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms