RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 IL17AQ16552 155 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 LZTFL1Q9NQ48 299 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 ST7Q9NRC1 585 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 RBM28Q9NW13 759 aaKnown RBP16.63■□□□□ 0.25
CNOT3-201ENST00000221232 SAP30BPQ9UHR5 308 aaKnown RBP16.63■□□□□ 0.25
CNOT3-201ENST00000221232 DDX41Q9UJV9 622 aaKnown RBP16.63■□□□□ 0.25
CNOT3-201ENST00000221232 SPATA31A5Q5VU36 1347 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 SPATA31A7Q8IWB4 1347 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 RBL2Q08999 1139 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 RASGRP2Q7LDG7 609 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 MNS1Q8NEH6 495 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 ZSWIM4Q9H7M6 989 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 CNTNAP5Q8WYK1 1306 aa16.63■□□□□ 0.25
CNOT3-201ENST00000221232 MYH2Q9UKX2 1941 aa16.62■□□□□ 0.25
CNOT3-201ENST00000221232 ARHGAP6O43182 974 aa16.62■□□□□ 0.25
CNOT3-201ENST00000221232 SCG2P13521 617 aa16.62■□□□□ 0.25
CNOT3-201ENST00000221232 CUL4BQ13620 913 aa16.62■□□□□ 0.25
CNOT3-201ENST00000221232 NR1I3Q14994 352 aa16.62■□□□□ 0.25
CNOT3-201ENST00000221232 RRAGBQ5VZM2 374 aa16.62■□□□□ 0.25
CNOT3-201ENST00000221232 EEF2KMTQ96G04 330 aa16.62■□□□□ 0.25
CNOT3-201ENST00000221232 C8orf37Q96NL8 207 aa16.62■□□□□ 0.25
CNOT3-201ENST00000221232 FEZ1Q99689 392 aa16.62■□□□□ 0.25
CNOT3-201ENST00000221232 BAZ2AQ9UIF9 1905 aaKnown RBP16.62■□□□□ 0.25
CNOT3-201ENST00000221232 NID2Q14112 1375 aa16.62■□□□□ 0.25
CNOT3-201ENST00000221232 GOLGA8HP0CJ92 632 aa16.62■□□□□ 0.25
CNOT3-201ENST00000221232 TBX2Q13207 712 aaPredicted RBP16.62■□□□□ 0.25
CNOT3-201ENST00000221232 CCDC93Q567U6 631 aa16.62■□□□□ 0.25
CNOT3-201ENST00000221232 RASSF8Q8NHQ8 419 aa16.62■□□□□ 0.25
CNOT3-201ENST00000221232 VPS16Q9H269 839 aa16.62■□□□□ 0.25
CNOT3-201ENST00000221232 L2HGDHQ9H9P8 463 aa16.62■□□□□ 0.25
CNOT3-201ENST00000221232 THRAP3Q9Y2W1 955 aaKnown RBP16.62■□□□□ 0.25
CNOT3-201ENST00000221232 PP2D1A8MPX8 630 aa16.61■□□□□ 0.25
CNOT3-201ENST00000221232 ZSCAN12O43309 604 aa16.61■□□□□ 0.25
CNOT3-201ENST00000221232 IGSF22Q8N9C0 903 aa16.61■□□□□ 0.25
CNOT3-201ENST00000221232 MTA3Q9BTC8 594 aa16.61■□□□□ 0.25
CNOT3-201ENST00000221232 KAT14Q9H8E8 782 aa16.61■□□□□ 0.25
CNOT3-201ENST00000221232 MKNK2Q9HBH9 465 aa16.61■□□□□ 0.25
CNOT3-201ENST00000221232 PRDM4Q9UKN5 801 aa16.61■□□□□ 0.25
CNOT3-201ENST00000221232 GOLGB1Q14789 3259 aaKnown RBP16.61■□□□□ 0.25
CNOT3-201ENST00000221232 BCL9LQ86UU0 1499 aa16.61■□□□□ 0.25
CNOT3-201ENST00000221232 SYNRGQ9UMZ2 1314 aa16.61■□□□□ 0.25
CNOT3-201ENST00000221232 UBXN4Q92575 508 aa16.61■□□□□ 0.25
CNOT3-201ENST00000221232 ZNF446Q9NWS9 450 aa16.61■□□□□ 0.25
CNOT3-201ENST00000221232 STX8Q9UNK0 236 aa16.61■□□□□ 0.25
CNOT3-201ENST00000221232 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.61■□□□□ 0.251e-7■■□□□ 11.9
CNOT3-201ENST00000221232 LRP5O75197 1615 aa16.61■□□□□ 0.25
CNOT3-201ENST00000221232 NHSL1Q5SYE7 1610 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 CALM1P0DP23 149 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 CALM2P0DP24 149 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 CALM3P0DP25 149 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 CASQ1P31415 396 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 PPP2R5BQ15173 497 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 SH3RF3Q8TEJ3 882 aaPredicted RBP16.6■□□□□ 0.25
CNOT3-201ENST00000221232 TNFRSF25Q93038 417 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 ECM29Q5VYK3 1845 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 PPP1R3GB7ZBB8 358 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 PES1O00541 588 aaKnown RBP16.6■□□□□ 0.25
CNOT3-201ENST00000221232 RCAN1P53805 252 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 SPATA1Q5VX52 437 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 RCSD1Q6JBY9 416 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 PPFIBP1Q86W92 1011 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 SPATA20Q8TB22 786 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 TGFBRAP1Q8WUH2 860 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 MTRQ99707 1265 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 CICQ96RK0 1608 aaPredicted RBP16.6■□□□□ 0.25
CNOT3-201ENST00000221232 XDHP47989 1333 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 DDAH1O94760 285 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 TPTE2Q6XPS3 522 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 TRIML1Q8N9V2 468 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 FERMT2Q96AC1 680 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 CCDC34Q96HJ3 373 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 NGLY1Q96IV0 654 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 MRPL44Q9H9J2 332 aaKnown RBP16.6■□□□□ 0.25
CNOT3-201ENST00000221232 IL17RBQ9NRM6 502 aa16.6■□□□□ 0.25
CNOT3-201ENST00000221232 COL14A1Q05707 1796 aaKnown RBP16.59■□□□□ 0.25
CNOT3-201ENST00000221232 FAM205AQ6ZU69 1335 aa16.59■□□□□ 0.25
CNOT3-201ENST00000221232 AKR1B15C9JRZ8 316 aaPredicted RBP16.59■□□□□ 0.25
CNOT3-201ENST00000221232 CCP110O43303 1012 aa16.59■□□□□ 0.25
CNOT3-201ENST00000221232 DMTNQ08495 405 aa16.59■□□□□ 0.25
CNOT3-201ENST00000221232 TYW1BQ6NUM6 668 aa16.59■□□□□ 0.25
CNOT3-201ENST00000221232 MAPKAPK5Q8IW41 473 aa16.59■□□□□ 0.25
CNOT3-201ENST00000221232 GDAQ9Y2T3 454 aa16.59■□□□□ 0.25
CNOT3-201ENST00000221232 ERCC5P28715 1186 aaPredicted RBP16.59■□□□□ 0.25
CNOT3-201ENST00000221232 CASP14P31944 242 aa16.59■□□□□ 0.25
CNOT3-201ENST00000221232 ATP2C1P98194 919 aaPredicted RBP16.59■□□□□ 0.25
CNOT3-201ENST00000221232 NFIXQ14938 502 aa16.59■□□□□ 0.25
CNOT3-201ENST00000221232 HEATR3Q7Z4Q2 680 aa16.59■□□□□ 0.25
CNOT3-201ENST00000221232 ELOA2Q8IYF1 753 aaPredicted RBP16.59■□□□□ 0.25
CNOT3-201ENST00000221232 PNMA1Q8ND90 353 aa16.59■□□□□ 0.25
CNOT3-201ENST00000221232 VAT1LQ9HCJ6 419 aa16.59■□□□□ 0.25
CNOT3-201ENST00000221232 PARP3Q9Y6F1 533 aa16.59■□□□□ 0.25
CNOT3-201ENST00000221232 STX10O60499 249 aa16.58■□□□□ 0.25
CNOT3-201ENST00000221232 KCNJ6P48051 423 aa16.58■□□□□ 0.25
CNOT3-201ENST00000221232 CLCN6P51797 869 aa16.58■□□□□ 0.25
CNOT3-201ENST00000221232 DHX8Q14562 1220 aaKnown RBP16.58■□□□□ 0.25
CNOT3-201ENST00000221232 SH3RF1Q7Z6J0 888 aa16.58■□□□□ 0.25
CNOT3-201ENST00000221232 IQUBQ8NA54 791 aa16.58■□□□□ 0.25
CNOT3-201ENST00000221232 ATP8A2Q9NTI2 1148 aa16.58■□□□□ 0.25
CNOT3-201ENST00000221232 TAB2Q9NYJ8 693 aa16.58■□□□□ 0.25
CNOT3-201ENST00000221232 CHD4Q14839 1912 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms