RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.76■■■□□ 2.35
TSR3-201ENST00000007390 OSBPL3Q9H4L5 887 aa29.76■■■□□ 2.35
TSR3-201ENST00000007390 VCPKMTQ9H867 229 aa29.76■■■□□ 2.35
TSR3-201ENST00000007390 MKNK2Q9HBH9 465 aa29.76■■■□□ 2.35
TSR3-201ENST00000007390 ZNF287Q9HBT7 754 aa29.76■■■□□ 2.35
TSR3-201ENST00000007390 BIN2Q9UBW5 565 aaPredicted RBP29.76■■■□□ 2.35
TSR3-201ENST00000007390 GREB1LQ9C091 1923 aaPredicted RBP29.75■■■□□ 2.35
TSR3-201ENST00000007390 CNMDO75829 334 aa29.75■■■□□ 2.35
TSR3-201ENST00000007390 EEF2P13639 858 aaKnown RBP29.75■■■□□ 2.35
TSR3-201ENST00000007390 ELNP15502 786 aa29.75■■■□□ 2.35
TSR3-201ENST00000007390 KIAA1755Q5JYT7 1200 aa29.75■■■□□ 2.35
TSR3-201ENST00000007390 PLEKHM2Q8IWE5 1019 aa29.74■■■□□ 2.35
TSR3-201ENST00000007390 SOCS4Q8WXH5 440 aa29.74■■■□□ 2.35
TSR3-201ENST00000007390 NAPBQ9H115 298 aa29.74■■■□□ 2.35
TSR3-201ENST00000007390 PORCNQ9H237 461 aa29.74■■■□□ 2.35
TSR3-201ENST00000007390 HELLSQ9NRZ9 838 aa29.74■■■□□ 2.35
TSR3-201ENST00000007390 FOXP2O15409 715 aa29.73■■■□□ 2.35
TSR3-201ENST00000007390 INHAP05111 366 aa29.73■■■□□ 2.35
TSR3-201ENST00000007390 CCL5P13501 91 aa29.73■■■□□ 2.35
TSR3-201ENST00000007390 CCNA1P78396 465 aa29.73■■■□□ 2.35
TSR3-201ENST00000007390 COG2Q14746 738 aa29.73■■■□□ 2.35
TSR3-201ENST00000007390 TANGO6Q9C0B7 1094 aa29.73■■■□□ 2.35
TSR3-201ENST00000007390 HOXC10Q9NYD6 342 aa29.73■■■□□ 2.35
TSR3-201ENST00000007390 WDR46O15213 610 aaKnown RBP29.72■■■□□ 2.35
TSR3-201ENST00000007390 CCDC129Q6ZRS4 1044 aa29.72■■■□□ 2.35
TSR3-201ENST00000007390 GJB1P08034 283 aa29.71■■■□□ 2.35
TSR3-201ENST00000007390 CCAR1Q8IX12 1150 aaKnown RBP29.71■■■□□ 2.35
TSR3-201ENST00000007390 STK11IPQ8N1F8 1099 aa29.71■■■□□ 2.35
TSR3-201ENST00000007390 BTBD7Q9P203 1132 aa29.71■■■□□ 2.35
TSR3-201ENST00000007390 PLXNB2O15031 1838 aa29.71■■■□□ 2.35
TSR3-201ENST00000007390 ATP2B2Q01814 1243 aa29.7■■■□□ 2.35
TSR3-201ENST00000007390 GPR142Q7Z601 462 aa29.7■■■□□ 2.35
TSR3-201ENST00000007390 SPICE1Q8N0Z3 855 aa29.7■■■□□ 2.35
TSR3-201ENST00000007390 NKX2-3Q8TAU0 364 aa29.7■■■□□ 2.35
TSR3-201ENST00000007390 NUDT12Q9BQG2 462 aa29.7■■■□□ 2.35
TSR3-201ENST00000007390 RNF208Q9H0X6 261 aa29.7■■■□□ 2.35
TSR3-201ENST00000007390 GOPCQ9HD26 462 aa29.7■■■□□ 2.35
TSR3-201ENST00000007390 NYAP2Q9P242 653 aa29.7■■■□□ 2.35
TSR3-201ENST00000007390 IGKV6D-41A0A0C4DH26 115 aa29.69■■■□□ 2.34
TSR3-201ENST00000007390 TRIM6-TRIM34B2RNG4 842 aa29.69■■■□□ 2.34
TSR3-201ENST00000007390 SLC3A2P08195 630 aaKnown RBP29.69■■■□□ 2.34
TSR3-201ENST00000007390 XRCC5P13010 732 aaKnown RBP29.69■■■□□ 2.34
TSR3-201ENST00000007390 PDE4BQ07343 736 aa29.69■■■□□ 2.34
TSR3-201ENST00000007390 PPARAQ07869 468 aa29.69■■■□□ 2.34
TSR3-201ENST00000007390 PLEKHH3Q7Z736 793 aa29.69■■■□□ 2.34
TSR3-201ENST00000007390 ZNF444Q8N0Y2 327 aaPredicted RBP29.69■■■□□ 2.34
TSR3-201ENST00000007390 USP6NLQ92738 828 aa29.69■■■□□ 2.34
TSR3-201ENST00000007390 FAM227BQ96M60 508 aa29.69■■■□□ 2.34
TSR3-201ENST00000007390 UNC93B1Q9H1C4 597 aa29.69■■■□□ 2.34
TSR3-201ENST00000007390 RLFQ13129 1914 aa29.69■■■□□ 2.34
TSR3-201ENST00000007390 A0A0G2JMZ2 1700 aa29.68■■■□□ 2.34
TSR3-201ENST00000007390 PLIN4Q96Q06 1357 aa29.68■■■□□ 2.34
TSR3-201ENST00000007390 A0A0D9SFI3 127 aa29.68■■■□□ 2.34
TSR3-201ENST00000007390 PRDM1O75626 825 aa29.68■■■□□ 2.34
TSR3-201ENST00000007390 HMGCRP04035 888 aa29.68■■■□□ 2.34
TSR3-201ENST00000007390 GJA8P48165 433 aa29.68■■■□□ 2.34
TSR3-201ENST00000007390 MCMDC2Q4G0Z9 681 aa29.68■■■□□ 2.34
TSR3-201ENST00000007390 MORN1Q5T089 497 aa29.68■■■□□ 2.34
TSR3-201ENST00000007390 MB21D1Q8N884 522 aa29.68■■■□□ 2.34
TSR3-201ENST00000007390 SHISA4Q96DD7 197 aa29.68■■■□□ 2.34
TSR3-201ENST00000007390 DSG3P32926 999 aa29.67■■■□□ 2.34
TSR3-201ENST00000007390 ALX1Q15699 326 aa29.67■■■□□ 2.34
TSR3-201ENST00000007390 VPS53Q5VIR6 699 aa29.67■■■□□ 2.34
TSR3-201ENST00000007390 FLOT1O75955 427 aa29.66■■■□□ 2.34
TSR3-201ENST00000007390 RILPL2Q969X0 211 aa29.66■■■□□ 2.34
TSR3-201ENST00000007390 SYNPO2Q9UMS6 1093 aa29.66■■■□□ 2.34
TSR3-201ENST00000007390 CYP2B6P20813 491 aa29.65■■■□□ 2.34
TSR3-201ENST00000007390 RGS2P41220 211 aa29.65■■■□□ 2.34
TSR3-201ENST00000007390 IRX6P78412 446 aaPredicted RBP29.65■■■□□ 2.34
TSR3-201ENST00000007390 NMIQ13287 307 aaPredicted RBP29.65■■■□□ 2.34
TSR3-201ENST00000007390 TRMT44Q8IYL2 757 aaKnown RBP29.65■■■□□ 2.34
TSR3-201ENST00000007390 NEDD1Q8NHV4 660 aa29.65■■■□□ 2.34
TSR3-201ENST00000007390 TRIB2Q92519 343 aa29.65■■■□□ 2.34
TSR3-201ENST00000007390 CWC22Q9HCG8 908 aaKnown RBP29.65■■■□□ 2.34
TSR3-201ENST00000007390 PAK6Q9NQU5 681 aaPredicted RBP29.65■■■□□ 2.34
TSR3-201ENST00000007390 ANAPC4Q9UJX5 808 aa29.65■■■□□ 2.34
TSR3-201ENST00000007390 CAPN2P17655 700 aa29.64■■■□□ 2.34
TSR3-201ENST00000007390 MTMR4Q9NYA4 1195 aa29.64■■■□□ 2.34
TSR3-201ENST00000007390 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.64■■■□□ 2.34
TSR3-201ENST00000007390 SHCBP1Q8NEM2 672 aa29.63■■■□□ 2.33
TSR3-201ENST00000007390 U2AF1L4Q8WU68 220 aaKnown RBP29.63■■■□□ 2.33
TSR3-201ENST00000007390 MKL1Q969V6 931 aa29.63■■■□□ 2.33
TSR3-201ENST00000007390 ATG4CQ96DT6 458 aa29.63■■■□□ 2.33
TSR3-201ENST00000007390 CEP95Q96GE4 821 aa29.63■■■□□ 2.33
TSR3-201ENST00000007390 APBA2Q99767 749 aa29.63■■■□□ 2.33
TSR3-201ENST00000007390 MOV10L1Q9BXT6 1211 aaKnown RBP29.63■■■□□ 2.33
TSR3-201ENST00000007390 SPATC1LQ9H0A9 340 aa29.63■■■□□ 2.33
TSR3-201ENST00000007390 ADAMTS5Q9UNA0 930 aa29.63■■■□□ 2.33
TSR3-201ENST00000007390 ZMYM6O95789 1325 aa29.63■■■□□ 2.33
TSR3-201ENST00000007390 PARP14Q460N5 1801 aa29.62■■■□□ 2.33
TSR3-201ENST00000007390 SLC15A5A6NIM6 579 aa29.62■■■□□ 2.33
TSR3-201ENST00000007390 TSPY3P0CV98 308 aa29.62■■■□□ 2.33
TSR3-201ENST00000007390 TSPY8P0CW00 308 aa29.62■■■□□ 2.33
TSR3-201ENST00000007390 SDSP20132 328 aa29.62■■■□□ 2.33
TSR3-201ENST00000007390 PTPREP23469 700 aa29.62■■■□□ 2.33
TSR3-201ENST00000007390 MAP2K5Q13163 448 aa29.62■■■□□ 2.33
TSR3-201ENST00000007390 PRPF38BQ5VTL8 546 aaKnown RBP29.62■■■□□ 2.33
TSR3-201ENST00000007390 ZNF589Q86UQ0 364 aaPredicted RBP29.62■■■□□ 2.33
TSR3-201ENST00000007390 CLIP2Q9UDT6 1046 aa29.62■■■□□ 2.33
TSR3-201ENST00000007390 CCDC171Q6TFL3 1326 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms