RNA–Protein interactions for RNA: ENSMUST00000215817.1

Upf1-202, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Upf1, Length 4,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-202ENSMUST00000215817 A430078G23RikE9Q7Y4 484 aa17.31■□□□□ 0.36
Upf1-202ENSMUST00000215817 Gm28047Q3US59 414 aa17.31■□□□□ 0.36
Upf1-202ENSMUST00000215817 Naa30Q8CES0 364 aa17.31■□□□□ 0.36
Upf1-202ENSMUST00000215817 Pip4k2aO70172 405 aa17.31■□□□□ 0.36
Upf1-202ENSMUST00000215817 Ube2oQ6ZPJ3 1288 aa17.31■□□□□ 0.36
Upf1-202ENSMUST00000215817 Plcg2Q8CIH5 1265 aa17.31■□□□□ 0.36
Upf1-202ENSMUST00000215817 Rbm6S4R1W5 1118 aaKnown RBP17.31■□□□□ 0.36
Upf1-202ENSMUST00000215817 Brd2Q7JJ13 798 aaKnown RBP17.31■□□□□ 0.36
Upf1-202ENSMUST00000215817 Ddx10Q80Y44 875 aaKnown RBP17.31■□□□□ 0.36
Upf1-202ENSMUST00000215817 WdpcpQ8C456 722 aa17.31■□□□□ 0.36
Upf1-202ENSMUST00000215817 Abcd1P48410 736 aa17.31■□□□□ 0.36
Upf1-202ENSMUST00000215817 Plekhf1Q3TB82 279 aa17.31■□□□□ 0.36
Upf1-202ENSMUST00000215817 Morc2bQ8C5W4 1022 aa17.31■□□□□ 0.36
Upf1-202ENSMUST00000215817 Stim2P83093 746 aa17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 Gprin1Q3UNH4 932 aa17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 Arhgef2Q60875 985 aa17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 Tsg101Q61187 391 aa17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 PigsQ6PD26 555 aaKnown RBP17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 Dcaf15Q6PFH3 600 aa17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 Krt9Q6RHW0 743 aa17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 CnstQ8CBC4 711 aa17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 C8aQ8K182 587 aa17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 GrapQ9CX99 217 aa17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 Ccdc105Q9D4K7 499 aa17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 Usp14Q9JMA1 493 aaKnown RBP17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 Vwa3bJ9JI28 736 aa17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 Tcp11l1Q8BTG3 509 aa17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 Nfxl1E9Q8I7 918 aaKnown RBP17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 Rc3h1Q4VGL6 1130 aaKnown RBP17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 Sv2cQ69ZS6 727 aa17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 Galnt17Q7TT15 598 aa17.3■□□□□ 0.36
Upf1-202ENSMUST00000215817 Ankrd35E9Q9D8 996 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Scg2Q03517 617 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Rpusd2Q149F1 553 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Aak1Q3UHJ0 959 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Alx1Q8C8B0 326 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Serpinb13Q8CDC0 389 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Tmem132aQ922P8 1018 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 B3galt4Q9Z0F0 371 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Gm11549A0A286YD83 63 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Lins1Q3U1D0 764 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Snx13Q6PHS6 957 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Hexim1Q8R409 356 aaKnown RBP17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Apbb1ipQ8R5A3 670 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Ftsj3Q9DBE9 838 aaKnown RBP17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Trim55G3X8Y1 545 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Fgl2P12804 432 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Ccdc113Q8C5T8 377 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Rad51bO35719 350 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Ubxn10Q8BG34 277 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Appl2Q8K3G9 662 aa17.29■□□□□ 0.36
Upf1-202ENSMUST00000215817 Vmn2r23E9PXI5 849 aa17.28■□□□□ 0.36
Upf1-202ENSMUST00000215817 Cep63Q3UPP8 700 aa17.28■□□□□ 0.36
Upf1-202ENSMUST00000215817 Plcd1Q8R3B1 756 aa17.28■□□□□ 0.36
Upf1-202ENSMUST00000215817 Sh3bp5lQ99LH9 392 aa17.28■□□□□ 0.36
Upf1-202ENSMUST00000215817 Polr2dQ9D7M8 142 aaKnown RBP17.28■□□□□ 0.36
Upf1-202ENSMUST00000215817 Grm1P97772 1199 aa17.28■□□□□ 0.36
Upf1-202ENSMUST00000215817 Hoxa13Q62424 386 aa17.28■□□□□ 0.36
Upf1-202ENSMUST00000215817 Rasgrp4Q8BTM9 673 aa17.28■□□□□ 0.36
Upf1-202ENSMUST00000215817 Slc13a4Q8BZ82 625 aa17.28■□□□□ 0.36
Upf1-202ENSMUST00000215817 Atp5c1Q91VR2 298 aaKnown RBP17.28■□□□□ 0.36
Upf1-202ENSMUST00000215817 Zfp91Q62511 572 aa17.28■□□□□ 0.36
Upf1-202ENSMUST00000215817 IqcgQ80W32 419 aa17.28■□□□□ 0.36
Upf1-202ENSMUST00000215817 VmacQ8BP01 174 aa17.28■□□□□ 0.36
Upf1-202ENSMUST00000215817 Ddx39aQ8VDW0 427 aaKnown RBP17.28■□□□□ 0.36
Upf1-202ENSMUST00000215817 Haus2Q9CQS9 234 aa17.28■□□□□ 0.36
Upf1-202ENSMUST00000215817 4931400O07RikQ9D4M5 137 aa17.28■□□□□ 0.36
Upf1-202ENSMUST00000215817 Ms4a2P20490 235 aa17.27■□□□□ 0.36
Upf1-202ENSMUST00000215817 Kcnj4P52189 445 aa17.27■□□□□ 0.36
Upf1-202ENSMUST00000215817 Gpbp1Q6NXH3 473 aaKnown RBP17.27■□□□□ 0.36
Upf1-202ENSMUST00000215817 Ccdc189Q6NZQ0 333 aa17.27■□□□□ 0.36
Upf1-202ENSMUST00000215817 Scfd1Q8BRF7 639 aaKnown RBP17.27■□□□□ 0.36
Upf1-202ENSMUST00000215817 Fam193aQ8CGI1 1231 aaKnown RBP17.27■□□□□ 0.36
Upf1-202ENSMUST00000215817 Slc12a8Q8VI23 705 aa17.27■□□□□ 0.36
Upf1-202ENSMUST00000215817 Gnl2Q99LH1 728 aaKnown RBP17.27■□□□□ 0.36
Upf1-202ENSMUST00000215817 Spata5Q3UMC0 893 aaKnown RBP17.27■□□□□ 0.36
Upf1-202ENSMUST00000215817 Svs3aF2Z472 265 aa17.27■□□□□ 0.35
Upf1-202ENSMUST00000215817 Dcdc2bF7BCK0 340 aa17.27■□□□□ 0.35
Upf1-202ENSMUST00000215817 Ms4a5Q810P8 197 aa17.27■□□□□ 0.35
Upf1-202ENSMUST00000215817 Klhl10Q9D5V2 608 aa17.27■□□□□ 0.35
Upf1-202ENSMUST00000215817 Tex2Q6ZPJ0 1128 aaKnown RBP17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 SpidrQ8BGX7 933 aa17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Phf20Q8BLG0 1010 aaKnown RBP17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Dnaaf2Q8BPI1 814 aa17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 CnpP16330 420 aa17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Cyp2d10P24456 504 aa17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Mns1Q61884 491 aa17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Tmem132dQ76HP3 1097 aa17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Tmc4Q7TQ65 694 aa17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Phf23Q8BSN5 401 aa17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Kcnh3Q9WVJ0 1095 aa17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Ahnak2E9PYB0 1738 aaKnown RBP17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Snx25Q3ZT31 840 aa17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Slc9c1Q6UJY2 1175 aa17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Kdm8Q9CXT6 414 aa17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Pcif1P59114 706 aa17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Elf1Q60775 612 aa17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Ces1Q8VCC2 565 aa17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Col4a3bpQ9EQG9 624 aa17.26■□□□□ 0.35
Upf1-202ENSMUST00000215817 Stx1aO35526 288 aa17.25■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 113.3 ms