RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Suclg2Q9Z2I8 433 aa26.18■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Palm3A2TJV2 734 aa26.17■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Alppl2P24823 529 aa26.17■■□□□ 1.78
Scn1b-201ENSMUST00000098548 CgnP59242 1191 aa26.17■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Cnksr2Q80YA9 1032 aa26.17■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Ireb2Q811J3 963 aaKnown RBP26.17■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Zfp317Q8C0Q5 607 aa26.17■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Prg3Q9JL95 222 aa26.17■■□□□ 1.78
Scn1b-201ENSMUST00000098548 TbcaP48428 108 aaKnown RBP26.16■■□□□ 1.78
Scn1b-201ENSMUST00000098548 SobpQ0P5V2 864 aa26.16■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Tmtc2Q56A06 836 aa26.16■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Ccdc82Q6PG04 518 aa26.16■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Cnpy3Q9DAU1 276 aa26.16■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Trmt112Q9DCG9 125 aa26.16■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Rbm46P86049 533 aa26.16■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Traf3ip1Q149C2 625 aa26.16■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Ddx49Q4FZF3 480 aaKnown RBP26.16■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Garem2Q6PAJ3 880 aa26.16■■□□□ 1.78
Scn1b-201ENSMUST00000098548 SynrgQ5SV85 1306 aa26.15■■□□□ 1.78
Scn1b-201ENSMUST00000098548 PtmaP26350 111 aa26.15■■□□□ 1.78
Scn1b-201ENSMUST00000098548 WaplQ65Z40 1200 aaKnown RBP26.15■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Pip5kl1Q6U7H8 395 aa26.15■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Scfd2Q8BTY8 684 aa26.15■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Bcs1lQ9CZP5 418 aa26.15■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Tmem47Q9JJG6 181 aa26.15■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Stx8O88983 236 aa26.14■■□□□ 1.78
Scn1b-201ENSMUST00000098548 ThbdP15306 577 aa26.14■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Usp5P56399 858 aaKnown RBP26.14■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Kif1bpQ6ZPU9 617 aa26.14■■□□□ 1.78
Scn1b-201ENSMUST00000098548 Alg3Q8K2A8 438 aa26.13■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Upf1Q9EPU0 1124 aaKnown RBP26.13■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Col11a1Q61245 1804 aa26.13■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Naaladl2A0A0N4SUJ3 795 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Gm9992B2RWK3 458 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Has3O08650 554 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 PtpraP18052 829 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Nap1l2P51860 460 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Ubash3aQ3V3E1 624 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Unc93aQ710D3 458 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Tbc1d5Q80XQ2 815 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Ttll1Q91V51 423 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Eid1Q9DCR4 169 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Frmpd4A2AFR3 1320 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Wdr33Q8K4P0 1330 aaKnown RBP26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Ccdc112A0AUP1 442 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Oog1E9Q5G7 496 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Babam1Q3UI43 333 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Cdca8Q8BHX3 289 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Rtn1Q8K0T0 780 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Gtf3c5Q8R2T8 520 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Mad2l2Q9D752 211 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Prkab1Q9R078 270 aa26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 SmapQ9R0P4 181 aaKnown RBP26.12■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Secisbp2lQ6A098 1086 aaKnown RBP26.11■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Lca5lQ8C0X0 741 aa26.11■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Dicer1Q8R418 1916 aa26.11■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Tbc1d8bA3KGB4 1114 aa26.1■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Syce3B5KM66 88 aa26.1■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Cbx2P30658 519 aa26.1■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Zfp341Q6PGC9 846 aa26.1■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Scfd1Q8BRF7 639 aaKnown RBP26.1■■□□□ 1.77
Scn1b-201ENSMUST00000098548 SdsQ8VBT2 327 aa26.1■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Sirt2Q8VDQ8 389 aa26.1■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Fam184aE9PW83 1143 aa26.09■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Magea8O89012 320 aa26.09■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Cd22P35329 862 aa26.09■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Cplx1P63040 134 aa26.09■■□□□ 1.77
Scn1b-201ENSMUST00000098548 OsbpQ3B7Z2 805 aa26.09■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Rasa3Q60790 834 aa26.09■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Nop2Q922K7 793 aaKnown RBP26.09■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Cdca7Q9D0M2 382 aa26.09■■□□□ 1.77
Scn1b-201ENSMUST00000098548 EhhadhQ9DBM2 718 aa26.09■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Arrdc4A0A0B4J1F4 415 aa26.08■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Zscan20B2KFW1 1030 aa26.08■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Scg2Q03517 617 aa26.08■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Zscan22Q8BGS5 496 aa26.08■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Slc4a7Q8BTY2 1034 aa26.08■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Cog5Q8C0L8 829 aa26.08■■□□□ 1.77
Scn1b-201ENSMUST00000098548 Cfap58B2RW38 873 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 1700013D24RikQ0P521 120 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Otud5Q3U2S4 566 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Gm28047Q3US59 414 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Ces3aQ63880 571 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Samm50Q8BGH2 469 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Wdr24Q8CFJ9 790 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Ces3bQ8VCU1 571 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Ccer1Q9CQL2 403 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Eif4enif1Q9EST3 983 aaKnown RBP26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Tulp1Q9Z273 543 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Ces1hD3Z298 562 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Ccng2O08918 344 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 HunkO88866 714 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 FosbP13346 338 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 LrmpQ60664 539 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Sv2cQ69ZS6 727 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Tm4sf4Q91XD3 202 aa26.07■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Pcmtd1P59913 357 aa26.06■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Bicd2Q921C5 820 aa26.06■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Yeats4Q9CR11 227 aaKnown RBP26.06■■□□□ 1.76
Scn1b-201ENSMUST00000098548 Col4a3bpQ9EQG9 624 aa26.06■■□□□ 1.76
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms