RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Atp6v0a1Q9Z1G4 839 aaKnown RBP9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Exoc7O35250 697 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Cobll1Q3UMF0 1273 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 MmeQ61391 750 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Tbc1d5Q80XQ2 815 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Cndp1Q8BUG2 492 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 CgasQ8C6L5 507 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Trim32Q8CH72 655 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Serpinb3bQ9D1Q5 387 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Dnajb2Q9QYI5 324 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Speer3W4VSP1 261 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Exoc3l2D3YUP5 789 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 NpcdF8VQB8 469 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Pfkfb2P70265 519 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 VcpQ01853 806 aaKnown RBP9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Kiaa0753Q6A000 959 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ppip5k2Q6ZQB6 1129 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Nap1l3Q794H2 544 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Fnbp1Q80TY0 616 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Frmd6Q8C0V9 622 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Vps52Q8C754 723 aaKnown RBP9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Rbm33Q9CXK9 1231 aaKnown RBP9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Galnt15Q9D2N8 638 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Uts2Q9QZQ3 123 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Taf7Q9R1C0 341 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Mtmr1Q9Z2C4 669 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 AurkcO88445 282 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Pde8aO88502 823 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 D1Pas1P16381 660 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Vil1Q62468 827 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ube2oQ6ZPJ3 1288 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Olfr58Q7TRF6 309 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Erlin2Q8BFZ9 340 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Fbxo38Q8BMI0 1194 aa9.91□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Magea6O89010 325 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Prl7d1P04769 244 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Dcdc2Q5DU00 475 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Prpf40bQ80W14 870 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Slc7a4Q8BLQ7 635 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Gnl3Q8CI11 538 aaKnown RBP9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Acnat1A2AKK5 416 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Ttll7A4Q9F0 912 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Pde4bB1AWC9 736 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Eps15P42567 897 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Zc3h18Q0P678 948 aaKnown RBP9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Eid3Q3V124 375 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Mum1l1Q4VA55 681 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Cwc25Q9DBF7 416 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Angptl2Q9R045 493 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Farp1F8VPU2 1048 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 MyocO70624 490 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Akap7Q7TN79 314 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Elac2Q80Y81 831 aaKnown RBP9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Fam160b2Q80YR2 744 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Fbxl21Q8BFZ4 434 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 Snx1Q9WV80 522 aa9.9□□□□□ -0.82
Clcn3-202ENSMUST00000056508 IvlP48997 467 aa9.9□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Taf1bP97358 586 aa9.9□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Pcgf5Q3UK78 256 aa9.9□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ndufaf2Q59J78 168 aa9.9□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Mat1aQ91X83 396 aaKnown RBP9.9□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Vstm5Q9D806 199 aa9.9□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Aebp2Q9Z248 504 aaKnown RBP9.9□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Rundc3bQ6PDC0 408 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Exoc1Q8R3S6 894 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Tnip2Q99JG7 430 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Stard3nlQ9DCI3 235 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Map3k14Q9WUL6 942 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Raph1F2Z3U3 1266 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Kifc3O35231 824 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ptgs2Q05769 604 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Foxd1Q61345 456 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Nlrp9cQ66X01 1004 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Csrnp2Q8BGQ2 534 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Tceal3Q8R0A5 200 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Adam33Q923W9 797 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Dnmt3aO88508 908 aaKnown RBP9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Znf280dQ68FE8 974 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Sfr1Q8BP27 319 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Rassf4Q8CB96 322 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 GneQ91WG8 722 aaKnown RBP9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 MmadhcQ99LS1 296 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Tlr3Q99MB1 905 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Nr1h3Q9Z0Y9 445 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Krt6bQ9Z331 562 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Ccdc149F6V035 524 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Hmx3P42581 356 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Dcaf17Q3TUL7 519 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Rpp38Q80UU2 280 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Cwf19l2Q8BG79 887 aaKnown RBP9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 AsphQ8BSY0 741 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Q8R1Y2 203 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Arhgap4B1AUY3 965 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Nfx1B1AY10 1114 aaKnown RBP9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Map9Q3TRR0 646 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Gas7Q60780 421 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Cep70Q6IQY5 616 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Nim1kQ8BHI9 436 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Mylk2Q8VCR8 613 aa9.89□□□□□ -0.83
Clcn3-202ENSMUST00000056508 Creld1Q91XD7 420 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms