RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 E9QMW4 1145 aa16.62■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Ube3aO08759 870 aa16.62■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Lmtk3Q5XJV6 1424 aa16.62■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Igbp1Q61249 340 aa16.62■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Sema4bQ62179 823 aa16.62■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Spats2Q8K1N4 545 aaKnown RBP16.62■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Stap2Q8R0L1 411 aa16.62■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Hexim1Q8R409 356 aaKnown RBP16.62■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Msantd4Q91YU3 345 aa16.62■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Saal1Q9D2C2 474 aa16.62■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 SetQ9EQU5 289 aaKnown RBP16.62■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Scgb2b11A0A087WR49 112 aa16.62■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Wnt7aP24383 349 aa16.62■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Pla2g4fQ50L41 855 aa16.62■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Sptlc3Q8BG54 563 aa16.62■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Foxo3Q9WVH4 672 aa16.62■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Irx1P81068 480 aa16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Ddx3yQ62095 658 aaKnown RBP16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Ttc26Q8BS45 554 aa16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Znrd1-asQ8R0E5 213 aa16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Rbm43Q99J64 343 aa16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Dnajc7Q9QYI3 494 aa16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Ercc4Q9QZD4 917 aa16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Tnks1bp1P58871 1720 aa16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Cyp3a25O09158 503 aa16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Meis3P97368 378 aa16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Ice2Q3UZ18 988 aaKnown RBP16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Ccdc42Q5SV66 316 aa16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Cnga2Q62398 664 aa16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Gga3Q8BMI3 718 aa16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 AopepQ8BXQ6 817 aa16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Calcoco1Q8CGU1 691 aa16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Klc4Q9DBS5 619 aa16.61■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Lrp6O88572 1613 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Gm21969J3QJZ1 289 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Pafah1b1P63005 410 aaKnown RBP16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Plekha7Q3UIL6 1118 aaKnown RBP16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Tax1bp1Q3UKC1 814 aaKnown RBP16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 PnocQ64387 187 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Clca2Q8BG22 942 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Traf3ip3Q8C0G2 513 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Spice1Q8C804 860 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 GptQ8QZR5 496 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Apopt1Q9CQW7 192 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Six6os1Q9CTN5 574 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Wdr64Q9D565 1086 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Speer4bQ9D9F7 267 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Col14a1Q80X19 1797 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Myh7Q91Z83 1935 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 CrcpO35427 148 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Hnrnph1O35737 449 aaKnown RBP16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Rad23bP54728 416 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Hnrnph2P70333 449 aaKnown RBP16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 D130040H23RikQ8BII3 405 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Nod2Q8K3Z0 1020 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Rab3il1Q8VDV3 383 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 EpgnQ924X1 152 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 4930550L24RikQ99PA7 320 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 RpainQ9CWY9 219 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Trp53inp1Q9QXE4 239 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Stat2Q9WVL2 923 aa16.6■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Il27raO70394 623 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 AcrbpQ3V140 540 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Rnf187Q8BFX1 236 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Tango6Q8C3S2 1079 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 E2f4Q8R0K9 410 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 KynuQ9CXF0 464 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 IcoslgQ9JHJ8 322 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Sgpp1Q9JI99 430 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Nck2O55033 380 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Cd3dP04235 173 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Sept1P42209 366 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Serpinb6dQ3UWK8 375 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Ppp1r1bQ60829 194 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Dusp9Q7TNL7 452 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Ppm1eQ80TL0 749 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Terb1Q8C0V1 768 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Ccdc186Q8C9S4 917 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Usp15Q8R5H1 981 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Stag1Q9D3E6 1258 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Calml3Q9D6P8 149 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Calr3Q9D9Q6 380 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Peg12Q9WVA7 283 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Tns3Q5SSZ5 1440 aa16.59■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Rimbp3Q3V0F0 1606 aa16.58■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Gm21680A0A0G2JGR8 267 aa16.58■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Rsph10bE9PYQ0 876 aa16.58■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Zfpm1O35615 995 aa16.58■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Capza3P70190 299 aa16.58■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 NeblQ0II04 452 aa16.58■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Ccdc33Q3ULW6 985 aa16.58■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Adam1aQ60813 791 aa16.58■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Rassf10Q8BL43 508 aa16.58■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Setdb2Q8C267 713 aa16.58■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Rbm28Q8CGC6 750 aaKnown RBP16.58■□□□□ 0.25
Ushbp1-201ENSMUST00000049184 Zfp853A0A1D5RM95 733 aa16.58■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Speer4aF8VPX6 267 aa16.58■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Secisbp2lQ6A098 1086 aaKnown RBP16.58■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Ccdc148Q6P5U8 527 aa16.58■□□□□ 0.24
Ushbp1-201ENSMUST00000049184 Pold4Q9CWP8 107 aa16.58■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms