RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Spata5Q3UMC0 893 aaKnown RBP18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Ccdc38Q8CDN8 563 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Txndc5Q91W90 417 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 PdclQ9DBX2 301 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Arfgef1G3X9K3 1846 aaKnown RBP18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Pnpla6Q3TRM4 1355 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Gm21969J3QJZ1 289 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Bnip3O55003 187 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Ccdc114Q3UX62 658 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Jakmip3Q5DTN8 844 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 RragbQ6NTA4 374 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Prpf40bQ80W14 870 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Map3k11Q80XI6 850 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Smc1bQ920F6 1248 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Sgpp1Q9JI99 430 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Foxo3Q9WVH4 672 aa18.19■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 A0A1Y7VML8 143 aa18.18■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Pfkfb3A7UAK5 555 aa18.18■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Tpp1O89023 562 aa18.18■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Dnm2P39054 870 aaKnown RBP18.18■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 HelbQ6NVF4 1074 aa18.18■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Slf2Q6P9P0 1278 aa18.18■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Aggf1Q7TN31 711 aa18.18■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Slc39a11Q8BWY7 342 aa18.18■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 LpxnQ99N69 386 aa18.18■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Tbc1d2B1AVH7 922 aa18.17■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Myh15E9Q264 1925 aa18.17■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Kcnb1Q03717 857 aa18.17■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Tmed8Q3UHI4 326 aa18.17■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Cep112Q5PR68 954 aa18.17■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Ctr9Q62018 1173 aaKnown RBP18.17■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Snd1Q78PY7 910 aaKnown RBP18.17■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Kat6bQ8BRB7 1872 aa18.17■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Nod2Q8K3Z0 1020 aa18.17■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 BccipQ9CWI3 316 aa18.17■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 AllcQ9JHX6 414 aa18.17■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 DonsonQ9QXP4 560 aa18.17■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Znf638Q61464 1960 aaKnown RBP18.17■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Gm3409A0A0G2JE67 319 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Cyp2j7A0A140T8U1 504 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Tex13cD3YU32 604 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Rfc1P35601 1131 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Ifit1bl2Q3U687 466 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Ehmt1Q5DW34 1296 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Hpcal4Q8BGZ1 191 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 NelfbQ8C4Y3 580 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Krt222Q8CCX5 294 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Ndufb9Q9CQJ8 179 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Fam217aQ9D9W6 419 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Herc3A6H6S0 1050 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Psmd14O35593 310 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Rhbdl3P58873 404 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Krt86P97861 486 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Cep131Q62036 1060 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 GypcQ78HU7 95 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Eps8l1Q8R5F8 716 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Sf3b3Q921M3 1217 aaKnown RBP18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Mss51Q9D5Z5 446 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Rai14Q9EP71 979 aaKnown RBP18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Dpf1Q9QX66 387 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Dnajc7Q9QYI3 494 aa18.16■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Exoc3l2D3YUP5 789 aa18.15■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Npy5rO70342 466 aa18.15■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Cdh15P33146 784 aa18.15■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Mars2Q499X9 586 aaKnown RBP18.15■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Epn1Q80VP1 575 aa18.15■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Spata4Q8K3V1 295 aa18.15■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 RarsQ9D0I9 660 aaKnown RBP18.15■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Pcdh11xF6ZNL5 1338 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Myh4Q5SX39 1939 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Gm5580A0A0N4SVP8 411 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 A0A1W2P6Q8 802 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Gm9048A0A1W2P7H4 802 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 A0A1W2P7S8 802 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 A0A1W2P7Z8 802 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Gm9046A0A1W2P855 802 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Ankrd63A2ARS0 390 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Nkx2-5P42582 318 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 TbcaP48428 108 aaKnown RBP18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Dynll1P63168 89 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Lrriq3Q14DL3 633 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Exoc5Q3TPX4 708 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Q66JV7 365 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Cdc5lQ6A068 802 aaKnown RBP18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Fhod1Q6P9Q4 1197 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 WhrnQ80VW5 918 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Cct8l1Q80YT3 562 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Sh3bp5lQ99LH9 392 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 ToporslQ9D2F8 683 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 ParvgQ9ERD8 331 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Ubxn8Q9QZ49 277 aa18.14■□□□□ 0.5
Ttc39b-202ENSMUST00000048274 Frmpd4A2AFR3 1320 aa18.14■□□□□ 0.49
Ttc39b-202ENSMUST00000048274 Sec14l1A8Y5H7 715 aa18.14■□□□□ 0.49
Ttc39b-202ENSMUST00000048274 Dctn1O08788 1281 aa18.14■□□□□ 0.49
Ttc39b-202ENSMUST00000048274 Gjb4Q02738 266 aa18.14■□□□□ 0.49
Ttc39b-202ENSMUST00000048274 Mindy1Q76LS9 468 aa18.14■□□□□ 0.49
Ttc39b-202ENSMUST00000048274 Nek5Q7TSC3 627 aa18.14■□□□□ 0.49
Ttc39b-202ENSMUST00000048274 Sept9Q80UG5 583 aa18.14■□□□□ 0.49
Ttc39b-202ENSMUST00000048274 Cracr2bQ80ZJ8 394 aa18.14■□□□□ 0.49
Ttc39b-202ENSMUST00000048274 Vipas39Q8BGQ1 491 aa18.14■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms