RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Kif3aP28741 701 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Ppp4cP97470 307 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Ap5z1Q3U829 807 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 LrmpQ60664 539 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 AsnsQ61024 561 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Taf6lQ8R2K4 616 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Pcdhb5Q91XZ5 792 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Gtf2a1Q99PM3 378 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Sgpp1Q9JI99 430 aa9.65□□□□□ -0.86
Ptchd1-201ENSMUST00000038665 Cspp1B2RX88 1205 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Samd1D3YXK1 519 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 AaasP58742 546 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Slc9a1Q61165 820 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Ccdc150Q8CDI7 1110 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Nop14Q8R3N1 860 aaKnown RBP9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Trmt112Q9DCG9 125 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Col5a2Q3U962 1497 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Dock5B2RY04 1868 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Sned1Q70E20 1403 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Ccdc85cE9Q6B2 420 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Usp17lbE9Q9U0 468 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Ampd3O08739 766 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 PcQ05920 1178 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Fbln1Q08879 705 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Fam178bQ24JP3 464 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Nsrp1Q5NCR9 542 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Ankrd40Q5SUE8 363 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Zkscan4Q5SZT6 480 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Tbc1d31Q6NXY1 996 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Clec16aQ80U30 1036 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 IqcgQ80W32 419 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Filip1Q9CS72 1211 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Sept14Q9DA97 430 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Eif4enif1Q9EST3 983 aaKnown RBP9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Ecm29Q6PDI5 1840 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 SrcapA0A087WQ44 3271 aa9.64□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Pabpc1lA2A5N3 607 aaKnown RBP9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Gm5624F6ZZG8 207 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Sdc2P43407 202 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Scg2Q03517 617 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Glra4Q61603 456 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Best3Q6H1V1 669 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Tas2r124Q7M718 309 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Caps2Q8BUG5 550 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Inpp5bQ8K337 993 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Rcan1Q9JHG6 198 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Sel1lQ9Z2G6 790 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Zfp646Q6NV66 1788 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Gm7356A0A087WSA6 508 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Klhl34A2AI76 644 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Apol7aB2RT54 418 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Sema3fO88632 785 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Kctd1Q5M956 257 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 TfrcQ62351 763 aaKnown RBP9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Luc7l2Q7TNC4 392 aaKnown RBP9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Lrrc8aQ80WG5 810 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 BC048507Q80ZS7 89 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Dlg1Q811D0 905 aaKnown RBP9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Trmt2aQ8BNV1 574 aaKnown RBP9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Gpcpd1Q8C0L9 675 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Krt23Q99PS0 422 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Akap8Q9DBR0 687 aaKnown RBP9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Nr2e3Q9QXZ7 395 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Myh8P13542 1937 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Sycp2lA0A0M3U1B0 842 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Prdm11A2AGX3 565 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Palm3A2TJV2 734 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Diaph1O08808 1255 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Calm1P0DP26 149 aaKnown RBP9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Calm2P0DP27 149 aaKnown RBP9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Calm3P0DP28 149 aaKnown RBP9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Ercc4Q9QZD4 917 aa9.63□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 TicrrQ8BQ33 1889 aa9.62□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Pla2g4bP0C871 782 aa9.62□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Nf2P46662 596 aa9.62□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Nxf2Q4ZGD8 691 aa9.62□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Psmd10Q9Z2X2 231 aa9.62□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Acad12D3Z7X0 555 aa9.62□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Plekha7Q3UIL6 1118 aaKnown RBP9.62□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Dpf2Q61103 391 aaKnown RBP9.62□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Zdhhc14Q8BQQ1 489 aa9.62□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Zbed3Q9D0L1 228 aa9.62□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 UvssaQ9D479 717 aa9.62□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Baiap2l1Q9DBJ3 514 aa9.62□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 AllcQ9JHX6 414 aa9.62□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Gm21969J3QJZ1 289 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 MthfslL7N466 203 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Vcam1P29533 739 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Rad23bP54728 416 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Tmtc2Q56A06 836 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Mei4Q8BRM6 389 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Hexim1Q8R409 356 aaKnown RBP9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Yipf1Q91VU1 306 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Tomm22Q9CPQ3 142 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Tmem79Q9D709 391 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Ifi35Q9D8C4 286 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Fdx1P46656 188 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Nek1P51954 1203 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 Cep131Q62036 1060 aa9.61□□□□□ -0.87
Ptchd1-201ENSMUST00000038665 CrkQ64010 304 aa9.61□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms