RNA–Protein interactions for RNA: ENSMUST00000029941.15

Pdlim5-201, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Pdlim5, Length 5,016 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-201ENSMUST00000029941 Kcnb2A6H8H5 907 aa13.79□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Kifc2O08672 792 aa13.79□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Gtf3c5Q8R2T8 520 aa13.79□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Kcnq5Q9JK45 933 aa13.79□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 GdaQ9R111 454 aa13.79□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 VrtnQ3SYK4 740 aa13.79□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Ift20Q61025 132 aa13.79□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 CtifQ6PEE2 600 aaKnown RBP13.79□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Acad12D3Z7X0 555 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Rasal2E9PW37 1286 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Ncf1Q09014 390 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Arfgap2Q99K28 520 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Tnrc6bQ8BKI2 1810 aaKnown RBP13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 PplQ9R269 1755 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Mst1rQ62190 1378 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 CoblQ5NBX1 1337 aaKnown RBP13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Adssl1P28650 457 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Traf3ip3Q8C0G2 513 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Pm20d1Q8C165 503 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Stag1Q9D3E6 1258 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Ltb4r2Q9JJL9 360 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Sox5P35710 763 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Acot10Q32MW3 439 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Rhpn1Q61085 643 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Vstm4T1NXB5 319 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Grin2dQ03391 1323 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Nbr1P97432 988 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Cyp7b1Q60991 507 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Glg1Q61543 1175 aaKnown RBP13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Uba5Q8VE47 403 aa13.78□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Evi5P97366 809 aa13.77□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Lrrc59Q922Q8 307 aaKnown RBP13.77□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Asic2Q925H0 512 aa13.77□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Ribc1Q9D0B8 379 aa13.77□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 NapaQ9DB05 295 aa13.77□□□□□ -0.2
Pdlim5-201ENSMUST00000029941 Cyp3a25O09158 503 aa13.77□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Il15P48346 162 aa13.77□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Vgll3P85442 326 aa13.77□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Fkbp3Q62446 224 aaKnown RBP13.77□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Galnt17Q7TT15 598 aa13.77□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Mettl5Q8K1A0 209 aa13.77□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Gpaa1Q9WTK3 621 aa13.77□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Rpl13P47963 211 aaKnown RBP13.77□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Tlcd1Q99JT6 247 aa13.77□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Kif13aQ9EQW7 1749 aa13.77□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Cdhr2E9Q7P9 1308 aa13.77□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Ptpn23Q6PB44 1692 aa13.77□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Gm5580A0A0N4SVP8 411 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Hmx1O70218 332 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Rps8P62242 208 aaKnown RBP13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Nab2Q61127 525 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Aggf1Q7TN31 711 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Tsen34Q8BMZ5 316 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Skor1Q8BX46 964 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Alx1Q8C8B0 326 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Sugp2Q8CH09 1067 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Vps33aQ9D2N9 598 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Fam84aQ9D650 292 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Ccnt1Q9QWV9 724 aaKnown RBP13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Nek1P51954 1203 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Cct5P80316 541 aaKnown RBP13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Tsga10Q6NY15 697 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Terb1Q8C0V1 768 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Pdia6Q922R8 440 aaKnown RBP13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 IghaA0A0A6YXW6 389 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Fbxl16A2RT62 479 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Slc7a1Q09143 622 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Hdac4Q6NZM9 1076 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Igsf3Q6ZQA6 1194 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 RragaQ80X95 313 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Kiaa1024Q8K3V7 917 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Pcdhb5Q91XZ5 792 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Pik3c2bE9QAN8 1632 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Slc4a1P04919 929 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 GabrdP22933 449 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Spata4Q8K3V1 295 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Efcc1Q9JJF6 558 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Pex3Q9QXY9 372 aa13.76□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Map7d1A2AJI0 846 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Enc1O35709 589 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Mdh1P14152 334 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Dcaf17Q3TUL7 519 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 KaznQ69ZS8 779 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 MbipQ99LQ1 341 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Mfap3lQ9D3X9 409 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Large1Q9Z1M7 756 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Col16a1Q8BLX7 1580 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Tom1O88746 492 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Dynll1P63168 89 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Haus7Q8BKT8 364 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Rassf2Q8BMS9 326 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Ttc5Q99LG4 440 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Rsph10bE9PYQ0 876 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Rapgef1Q3UHC1 1224 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Slc38a10Q5I012 1090 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Pus7lQ8CE46 702 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Ushbp1Q8R370 680 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Angptl3Q9R182 455 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Prr5lA2AVJ5 370 aa13.75□□□□□ -0.21
Pdlim5-201ENSMUST00000029941 Cetn3O35648 167 aa13.75□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms