RNA–Protein interactions for RNA: snR63

snR63, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR63, Length 255 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR63	snR63	BSP1	Q06604	576 aa		4.88	□□□□□ -1.63
snR63	snR63	PEX2	P32800	271 aa		4.87	□□□□□ -1.63
snR63	snR63	ORC2	P32833	620 aa		4.87	□□□□□ -1.63
snR63	snR63	GEX2	P36173	615 aa		4.87	□□□□□ -1.63
snR63	snR63	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
snR63	snR63	PFK26	P40433	827 aa	Known RBP	4.87	□□□□□ -1.63
snR63	snR63	VPS4	P52917	437 aa		4.87	□□□□□ -1.63
snR63	snR63	MEP3	P53390	489 aa		4.87	□□□□□ -1.63
snR63	snR63	REG1	Q00816	1014 aa		4.87	□□□□□ -1.63
snR63	snR63	YPL071C	Q02864	156 aa		4.87	□□□□□ -1.63
snR63	snR63	SNO4	Q04902	237 aa		4.87	□□□□□ -1.63
snR63	snR63	HSP33	Q08914	237 aa	Known RBP	4.87	□□□□□ -1.63
snR63	snR63	LEA1	Q08963	238 aa	Predicted RBP	4.87	□□□□□ -1.63
snR63	snR63	HSP32	Q08992	237 aa		4.87	□□□□□ -1.63
snR63	snR63	NDJ1	Q12366	352 aa		4.87	□□□□□ -1.63
snR63	snR63	ERG11	P10614	530 aa		4.86	□□□□□ -1.63
snR63	snR63	GFD2	P25370	566 aa	Known RBP	4.86	□□□□□ -1.63
snR63	snR63	CDC15	P27636	974 aa		4.86	□□□□□ -1.63
snR63	snR63	CHS3	P29465	1165 aa		4.86	□□□□□ -1.63
snR63	snR63	CBF2	P32504	956 aa		4.86	□□□□□ -1.63
snR63	snR63	SWE1	P32944	819 aa		4.86	□□□□□ -1.63
snR63	snR63	FTH1	P38310	465 aa		4.86	□□□□□ -1.63
snR63	snR63	PHM8	P40025	321 aa		4.86	□□□□□ -1.63
snR63	snR63	UBP7	P40453	1071 aa		4.86	□□□□□ -1.63
snR63	snR63	ATP23	P53722	227 aa		4.86	□□□□□ -1.63
snR63	snR63	RCO1	Q04779	684 aa		4.86	□□□□□ -1.63
snR63	snR63	RAD34	Q06665	692 aa		4.86	□□□□□ -1.63
snR63	snR63	SWA2	Q06677	668 aa		4.86	□□□□□ -1.63
snR63	snR63	LYS21	Q12122	440 aa	Known RBP	4.86	□□□□□ -1.63
snR63	snR63	FUM1	P08417	488 aa	Known RBP	4.85	□□□□□ -1.63
snR63	snR63	ERG8	P24521	451 aa		4.85	□□□□□ -1.63
snR63	snR63	SRB5	P32585	307 aa		4.85	□□□□□ -1.63
snR63	snR63	ATF1	P40353	525 aa		4.85	□□□□□ -1.63
snR63	snR63	ASG1	P40467	964 aa		4.85	□□□□□ -1.63
snR63	snR63	ADE16	P54113	591 aa	Known RBP	4.85	□□□□□ -1.63
snR63	snR63	FCP1	Q03254	732 aa		4.85	□□□□□ -1.63
snR63	snR63	VPS72	Q03388	795 aa		4.85	□□□□□ -1.63
snR63	snR63	COQ11	Q05892	277 aa		4.85	□□□□□ -1.63
snR63	snR63	TPO3	Q06451	622 aa		4.85	□□□□□ -1.63
snR63	snR63	YNL162W-A	Q3E7A8	72 aa		4.85	□□□□□ -1.63
snR63	snR63	YOL087C	Q99247	1116 aa		4.85	□□□□□ -1.63
snR63	snR63	VCX1	Q99385	411 aa		4.85	□□□□□ -1.63
snR63	snR63	CET1	O13297	549 aa	Predicted RBP	4.84	□□□□□ -1.63
snR63	snR63	SUI3	P09064	285 aa	Known RBP	4.84	□□□□□ -1.63
snR63	snR63	MAK32	P23060	363 aa		4.84	□□□□□ -1.63
snR63	snR63	GSH1	P32477	678 aa		4.84	□□□□□ -1.63
snR63	snR63	YJR061W	P40355	935 aa		4.84	□□□□□ -1.63
snR63	snR63	MNT3	P40549	630 aa		4.84	□□□□□ -1.63
snR63	snR63	BPL1	P48445	690 aa	Predicted RBP	4.84	□□□□□ -1.63
snR63	snR63	CRN1	Q06440	651 aa		4.84	□□□□□ -1.63
snR63	snR63	RPB2	P08518	1224 aa	Known RBP	4.83	□□□□□ -1.64
snR63	snR63	ILS1	P09436	1072 aa	Known RBP	4.83	□□□□□ -1.64
snR63	snR63	NUP1	P20676	1076 aa		4.83	□□□□□ -1.64
snR63	snR63	YSP3	P25036	478 aa		4.83	□□□□□ -1.64
snR63	snR63	MRP20	P32387	263 aa		4.83	□□□□□ -1.64
snR63	snR63	IMD2	P38697	523 aa	Known RBP	4.83	□□□□□ -1.64
snR63	snR63	PSD1	P39006	500 aa		4.83	□□□□□ -1.64
snR63	snR63	MRX1	P40050	688 aa		4.83	□□□□□ -1.64
snR63	snR63	IMD3	P50095	523 aa	Known RBP	4.83	□□□□□ -1.64
snR63	snR63	BSC5	P53755	489 aa		4.83	□□□□□ -1.64
snR63	snR63	THI3	Q07471	609 aa		4.83	□□□□□ -1.64
snR63	snR63	SKM1	Q12469	655 aa		4.83	□□□□□ -1.64
snR63	snR63	PGK1	P00560	416 aa	Known RBP	4.82	□□□□□ -1.64
snR63	snR63	APN1	P22936	367 aa		4.82	□□□□□ -1.64
snR63	snR63	URE2	P23202	354 aa	Known RBP	4.82	□□□□□ -1.64
snR63	snR63	MSS51	P32335	436 aa		4.82	□□□□□ -1.64
snR63	snR63	LHS1	P36016	881 aa		4.82	□□□□□ -1.64
snR63	snR63	TMA108	P40462	946 aa		4.82	□□□□□ -1.64
snR63	snR63	DPH1	P40487	425 aa	Known RBP	4.82	□□□□□ -1.64
snR63	snR63	MUB1	Q03162	620 aa		4.82	□□□□□ -1.64
snR63	snR63	SNU56	Q03782	492 aa	Known RBP	4.82	□□□□□ -1.64
snR63	snR63	PSK2	Q08217	1101 aa		4.82	□□□□□ -1.64
snR63	snR63	YLR111W	Q12528	110 aa		4.82	□□□□□ -1.64
snR63	snR63	PCT1	P13259	424 aa		4.81	□□□□□ -1.64
snR63	snR63	PRE8	P23639	250 aa		4.81	□□□□□ -1.64
snR63	snR63	SOF1	P33750	489 aa	Known RBP	4.81	□□□□□ -1.64
snR63	snR63	AAP1	P37898	856 aa	Known RBP	4.81	□□□□□ -1.64
snR63	snR63	KTR3	P38130	404 aa	Predicted RBP	4.81	□□□□□ -1.64
snR63	snR63	SEC31	P38968	1273 aa	Known RBP	4.81	□□□□□ -1.64
snR63	snR63	CIN1	P40987	1014 aa		4.81	□□□□□ -1.64
snR63	snR63	IRC7	P43623	340 aa		4.81	□□□□□ -1.64
snR63	snR63	ORC5	P50874	479 aa		4.81	□□□□□ -1.64
snR63	snR63	LGE1	Q02796	332 aa	Known RBP	4.81	□□□□□ -1.64
snR63	snR63	SEG1	Q04279	960 aa		4.81	□□□□□ -1.64
snR63	snR63	TMA64	Q04600	565 aa	Known RBP	4.81	□□□□□ -1.64
snR63	snR63	YDR056C	Q12025	205 aa		4.81	□□□□□ -1.64
snR63	snR63	YOR019W	Q99248	730 aa		4.81	□□□□□ -1.64
snR63	snR63	MRP2	P10663	115 aa	Predicted RBP	4.8	□□□□□ -1.64
snR63	snR63	MBR1	P23493	339 aa		4.8	□□□□□ -1.64
snR63	snR63	NTR2	P36118	322 aa	Predicted RBP	4.8	□□□□□ -1.64
snR63	snR63	YEL068C	P39977	110 aa		4.8	□□□□□ -1.64
snR63	snR63	IME4	P41833	600 aa		4.8	□□□□□ -1.64
snR63	snR63	SNO3	P43544	222 aa		4.8	□□□□□ -1.64
snR63	snR63	ARC1	P46672	376 aa	Known RBP	4.8	□□□□□ -1.64
snR63	snR63	NMD5	P46970	1048 aa		4.8	□□□□□ -1.64
snR63	snR63	YPR003C	P53394	754 aa		4.8	□□□□□ -1.64
snR63	snR63	THI7	Q05998	598 aa		4.8	□□□□□ -1.64
snR63	snR63	ENT1	Q12518	454 aa		4.8	□□□□□ -1.64
snR63	snR63	YBR085C-A	O43137	85 aa		4.79	□□□□□ -1.64
snR63	snR63	CDC24	P11433	854 aa	Predicted RBP	4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms