RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C PLP2Q12017 286 aa4.5□□□□□ -1.69
SNF8YPL002C YOL098CQ12496 1037 aa4.5□□□□□ -1.69
SNF8YPL002C CET1O13297 549 aaPredicted RBP4.49□□□□□ -1.69
SNF8YPL002C PDE1P22434 369 aa4.49□□□□□ -1.69
SNF8YPL002C PGS1P25578 521 aa4.49□□□□□ -1.69
SNF8YPL002C HOG1P32485 435 aa4.49□□□□□ -1.69
SNF8YPL002C ECM32P32644 1121 aaKnown RBP4.49□□□□□ -1.69
SNF8YPL002C SKG6P32900 734 aaPredicted RBP4.49□□□□□ -1.69
SNF8YPL002C HEL1P36113 551 aa4.49□□□□□ -1.69
SNF8YPL002C DSS1P39112 969 aa4.49□□□□□ -1.69
SNF8YPL002C FIS1P40515 155 aa4.49□□□□□ -1.69
SNF8YPL002C BFA1P47113 574 aa4.49□□□□□ -1.69
SNF8YPL002C YGR151CP53287 111 aa4.49□□□□□ -1.69
SNF8YPL002C MFM1Q02783 413 aa4.49□□□□□ -1.69
SNF8YPL002C CIT2P08679 460 aa4.48□□□□□ -1.69
SNF8YPL002C GSY1P23337 708 aa4.48□□□□□ -1.69
SNF8YPL002C SEC6P32844 805 aa4.48□□□□□ -1.69
SNF8YPL002C CSE1P33307 960 aa4.48□□□□□ -1.69
SNF8YPL002C AAP1P37898 856 aaKnown RBP4.48□□□□□ -1.69
SNF8YPL002C HMT1P38074 348 aa4.48□□□□□ -1.69
SNF8YPL002C PBP2P38151 413 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69not detected
SNF8YPL002C MRX3P38172 270 aa4.48□□□□□ -1.69
SNF8YPL002C ZAP1P47043 880 aa4.48□□□□□ -1.69
SNF8YPL002C DIP5P53388 608 aa4.48□□□□□ -1.69
SNF8YPL002C IMP4P53941 290 aaKnown RBP4.48□□□□□ -1.69
SNF8YPL002C RCR2Q03446 210 aaKnown RBP4.48□□□□□ -1.69
SNF8YPL002C RIM13Q03792 727 aa4.48□□□□□ -1.69
SNF8YPL002C YHM2Q04013 314 aa4.48□□□□□ -1.69
SNF8YPL002C PGA3Q12746 312 aaKnown RBP4.48□□□□□ -1.69
SNF8YPL002C MSB2P32334 1306 aa4.47□□□□□ -1.69
SNF8YPL002C SRD1P09007 221 aa4.47□□□□□ -1.69
SNF8YPL002C GLN3P18494 730 aa4.47□□□□□ -1.69
SNF8YPL002C MSH2P25847 964 aa4.47□□□□□ -1.69
SNF8YPL002C DPH2P32461 534 aa4.47□□□□□ -1.69
SNF8YPL002C BIT2P38346 545 aa4.47□□□□□ -1.69
SNF8YPL002C YHR097CP38809 366 aaKnown RBP4.47□□□□□ -1.69
SNF8YPL002C MIT1P40002 666 aa4.47□□□□□ -1.69
SNF8YPL002C YNR061CP53747 219 aa4.47□□□□□ -1.69
SNF8YPL002C CWC21Q03375 135 aaKnown RBP4.47□□□□□ -1.69
SNF8YPL002C RPN4Q03465 531 aa4.47□□□□□ -1.69
SNF8YPL002C YLH47Q06493 454 aa4.47□□□□□ -1.69
SNF8YPL002C PDH1Q12428 516 aaKnown RBP4.47□□□□□ -1.69
SNF8YPL002C TCP1P12612 559 aaKnown RBP4.46□□□□□ -1.7
SNF8YPL002C STE12P13574 688 aa4.46□□□□□ -1.7
SNF8YPL002C COT1P32798 439 aa4.46□□□□□ -1.7
SNF8YPL002C YMC2P38087 329 aa4.46□□□□□ -1.7
SNF8YPL002C OPY1P38271 328 aa4.46□□□□□ -1.7
SNF8YPL002C MED6P38782 295 aa4.46□□□□□ -1.7
SNF8YPL002C GAA1P39012 614 aa4.46□□□□□ -1.7
SNF8YPL002C PCI8P40512 444 aa4.46□□□□□ -1.7
SNF8YPL002C GLO1P50107 326 aa4.46□□□□□ -1.7
SNF8YPL002C RTT102P53330 157 aa4.46□□□□□ -1.7
SNF8YPL002C SPC98P53540 846 aa4.46□□□□□ -1.7
SNF8YPL002C RET3P53600 189 aa4.46□□□□□ -1.7
SNF8YPL002C ALG11P53954 548 aaKnown RBP4.46□□□□□ -1.7
SNF8YPL002C STP1Q00947 519 aa4.46□□□□□ -1.7
SNF8YPL002C CHS5Q12114 671 aaKnown RBP4.46□□□□□ -1.7
SNF8YPL002C MPD2Q99316 277 aa4.46□□□□□ -1.7
SNF8YPL002C PCK1P10963 549 aa4.45□□□□□ -1.7
SNF8YPL002C PRP28P23394 588 aa4.45□□□□□ -1.7
SNF8YPL002C VPS3P23643 1011 aa4.45□□□□□ -1.7
SNF8YPL002C YKL091CP33324 310 aaKnown RBP4.45□□□□□ -1.7
SNF8YPL002C BMH2P34730 273 aaKnown RBP4.45□□□□□ -1.7
SNF8YPL002C VID24P38263 362 aa4.45□□□□□ -1.7
SNF8YPL002C PIG2P40187 538 aa4.45□□□□□ -1.7
SNF8YPL002C BUD6P41697 788 aa4.45□□□□□ -1.7
SNF8YPL002C SET2P46995 733 aaKnown RBP4.45□□□□□ -1.7
SNF8YPL002C YGL138CP53122 345 aa4.45□□□□□ -1.7
SNF8YPL002C NCS2P53923 493 aaPredicted RBP4.45□□□□□ -1.7
SNF8YPL002C GYL1Q04322 720 aa4.45□□□□□ -1.7
SNF8YPL002C DIA2Q08496 732 aaPredicted RBP4.45□□□□□ -1.7
SNF8YPL002C IES4Q08561 116 aa4.45□□□□□ -1.7
SNF8YPL002C SLK19Q08581 821 aaKnown RBP4.45□□□□□ -1.7
SNF8YPL002C CEX1Q12453 761 aa4.45□□□□□ -1.7
SNF8YPL002C SMC6Q12749 1114 aa4.45□□□□□ -1.7
SNF8YPL002C PHO5P00635 467 aa4.44□□□□□ -1.7
SNF8YPL002C ERG11P10614 530 aa4.44□□□□□ -1.7
SNF8YPL002C ABF1P14164 731 aa4.44□□□□□ -1.7
SNF8YPL002C THR4P16120 514 aaKnown RBP4.44□□□□□ -1.7
SNF8YPL002C RPA135P22138 1203 aaKnown RBP4.44□□□□□ -1.7
SNF8YPL002C FEN2P25621 512 aaKnown RBP4.44□□□□□ -1.7
SNF8YPL002C YER186CP40101 306 aa4.44□□□□□ -1.7
SNF8YPL002C NUP82P40368 713 aa4.44□□□□□ -1.7
SNF8YPL002C MPS3P47069 682 aa4.44□□□□□ -1.7
SNF8YPL002C VPS25P47142 202 aa4.44□□□□□ -1.7
SNF8YPL002C RFX1P48743 811 aa4.44□□□□□ -1.7
SNF8YPL002C PSP1P50896 841 aaKnown RBP4.44□□□□□ -1.7
SNF8YPL002C AIM14P53109 570 aa4.44□□□□□ -1.7
SNF8YPL002C MNP1P53163 194 aaPredicted RBP4.44□□□□□ -1.7
SNF8YPL002C CUL3P53202 744 aa4.44□□□□□ -1.7
SNF8YPL002C NMA2P53204 395 aa4.44□□□□□ -1.7
SNF8YPL002C YNL146WP53906 100 aa4.44□□□□□ -1.7
SNF8YPL002C ADA2Q02336 434 aa4.44□□□□□ -1.7
SNF8YPL002C SEG1Q04279 960 aa4.44□□□□□ -1.7
SNF8YPL002C ECM7Q06200 448 aa4.44□□□□□ -1.7
SNF8YPL002C YDL086WQ07505 273 aa4.44□□□□□ -1.7
SNF8YPL002C SPE3Q12074 293 aaKnown RBP4.44□□□□□ -1.7
SNF8YPL002C COX4P04037 155 aa4.43□□□□□ -1.7
SNF8YPL002C HMG1P12683 1054 aa4.43□□□□□ -1.7
SNF8YPL002C PRP22P24384 1145 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms