RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeast

Gene HSH49, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSH49	YOR319W	SWT1	Q12104	458 aa		4.16	□□□□□ -1.74
HSH49	YOR319W	NOP58	Q12499	511 aa	Known RBP	4.16	□□□□□ -1.74
HSH49	YOR319W	YBR126W-A	Q8TGU7	68 aa		4.16	□□□□□ -1.74
HSH49	YOR319W	SEC53	P07283	254 aa	Known RBP	4.15	□□□□□ -1.75
HSH49	YOR319W	FUR1	P18562	216 aa	Known RBP	4.15	□□□□□ -1.75
HSH49	YOR319W	ERG8	P24521	451 aa		4.15	□□□□□ -1.75
HSH49	YOR319W	SAT4	P25333	603 aa	Known RBP	4.15	□□□□□ -1.75
HSH49	YOR319W	CDC5	P32562	705 aa		4.15	□□□□□ -1.75
HSH49	YOR319W	NPL6	P32832	435 aa		4.15	□□□□□ -1.75
HSH49	YOR319W	RKM3	P38222	552 aa		4.15	□□□□□ -1.75
HSH49	YOR319W	PSD1	P39006	500 aa		4.15	□□□□□ -1.75
HSH49	YOR319W	MIT1	P40002	666 aa		4.15	□□□□□ -1.75
HSH49	YOR319W	PFK26	P40433	827 aa	Known RBP	4.15	□□□□□ -1.75
HSH49	YOR319W	ARF3	P40994	183 aa	RIP-Chip data	4.15	□□□□□ -1.75	not detected
HSH49	YOR319W	PMT6	P42934	759 aa		4.15	□□□□□ -1.75
HSH49	YOR319W	GLO1	P50107	326 aa		4.15	□□□□□ -1.75
HSH49	YOR319W	SEC5	P89102	971 aa		4.15	□□□□□ -1.75
HSH49	YOR319W	ENT4	Q07872	247 aa		4.15	□□□□□ -1.75
HSH49	YOR319W	PSK2	Q08217	1101 aa		4.15	□□□□□ -1.75
HSH49	YOR319W	MDM20	Q12387	796 aa	Known RBP	4.15	□□□□□ -1.75
HSH49	YOR319W	HSH49	Q99181	213 aa	Predicted RBP	4.15	□□□□□ -1.75
HSH49	YOR319W	KGD2	P19262	463 aa	Predicted RBP	4.14	□□□□□ -1.75
HSH49	YOR319W	CNE1	P27825	502 aa		4.14	□□□□□ -1.75
HSH49	YOR319W	UGP1	P32861	499 aa	Known RBP	4.14	□□□□□ -1.75
HSH49	YOR319W	TFC3	P34111	1160 aa		4.14	□□□□□ -1.75
HSH49	YOR319W	GEX2	P36173	615 aa		4.14	□□□□□ -1.75
HSH49	YOR319W	YBL029W	P38201	376 aa		4.14	□□□□□ -1.75
HSH49	YOR319W	FLC2	P39719	783 aa		4.14	□□□□□ -1.75
HSH49	YOR319W	SLZ1	P40167	298 aa		4.14	□□□□□ -1.75
HSH49	YOR319W	ARE2	P53629	642 aa	Known RBP	4.14	□□□□□ -1.75
HSH49	YOR319W	FMP30	Q02883	468 aa		4.14	□□□□□ -1.75
HSH49	YOR319W	MUB1	Q03162	620 aa		4.14	□□□□□ -1.75
HSH49	YOR319W	NGL2	Q03264	515 aa	Known RBP	4.14	□□□□□ -1.75
HSH49	YOR319W	RAD30	Q04049	632 aa		4.14	□□□□□ -1.75
HSH49	YOR319W	STP3	Q05937	343 aa		4.14	□□□□□ -1.75
HSH49	YOR319W	VIP1	Q06685	1146 aa	Known RBP	4.14	□□□□□ -1.75
HSH49	YOR319W	CRT10	Q08226	957 aa		4.14	□□□□□ -1.75
HSH49	YOR319W	ADE5,7	P07244	802 aa	Known RBP	4.13	□□□□□ -1.75
HSH49	YOR319W	SUI3	P09064	285 aa	Known RBP	4.13	□□□□□ -1.75
HSH49	YOR319W	OCA4	P25366	362 aa		4.13	□□□□□ -1.75
HSH49	YOR319W	ALY1	P36117	915 aa		4.13	□□□□□ -1.75
HSH49	YOR319W	ARO9	P38840	513 aa	Predicted RBP	4.13	□□□□□ -1.75
HSH49	YOR319W	NPR2	P39923	615 aa		4.13	□□□□□ -1.75
HSH49	YOR319W	CIR1	P42940	261 aa		4.13	□□□□□ -1.75
HSH49	YOR319W	RMD8	P43620	662 aa		4.13	□□□□□ -1.75
HSH49	YOR319W	ASN1	P49089	572 aa	Known RBP	4.13	□□□□□ -1.75
HSH49	YOR319W	VPS75	P53853	264 aa		4.13	□□□□□ -1.75
HSH49	YOR319W	SPN1	Q06505	410 aa	Predicted RBP	4.13	□□□□□ -1.75
HSH49	YOR319W	YDL073W	Q07454	984 aa		4.13	□□□□□ -1.75
HSH49	YOR319W	RIX7	Q07844	837 aa	Known RBP	4.13	□□□□□ -1.75
HSH49	YOR319W	OSW1	Q08692	278 aa		4.13	□□□□□ -1.75
HSH49	YOR319W	CTI6	Q08923	506 aa		4.13	□□□□□ -1.75
HSH49	YOR319W	RCN2	Q12044	265 aa		4.13	□□□□□ -1.75
HSH49	YOR319W	NMD4	Q12129	218 aa		4.13	□□□□□ -1.75
HSH49	YOR319W	PRS5	Q12265	496 aa	Known RBP	4.13	□□□□□ -1.75
HSH49	YOR319W	AAC1	P04710	309 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	TPK2	P06245	380 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	YML003W	P0CF16	290 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	RED1	P14291	827 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	CKA1	P15790	372 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	STE4	P18851	423 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	CDC15	P27636	974 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	SRB5	P32585	307 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	BLI1	P35727	113 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	YKL050C	P35736	922 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	KTR3	P38130	404 aa	Predicted RBP	4.12	□□□□□ -1.75
HSH49	YOR319W	PIH1	P38768	344 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	MAM1	P40065	302 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	DJP1	P40564	432 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	MRX6	P48564	524 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	YGR079W	P53249	370 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	RPT6	Q01939	405 aa	Known RBP	4.12	□□□□□ -1.75
HSH49	YOR319W	TRS23	Q03784	219 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	YDR179W-A	Q03983	463 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	SYF1	Q04048	859 aa	Predicted RBP	4.12	□□□□□ -1.75
HSH49	YOR319W	CIR2	Q08822	631 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	SFI1	Q12369	946 aa		4.12	□□□□□ -1.75
HSH49	YOR319W	ARG3	P05150	338 aa		4.11	□□□□□ -1.75
HSH49	YOR319W	CHO2	P05374	869 aa	Known RBP	4.11	□□□□□ -1.75
HSH49	YOR319W	YCK1	P23291	538 aa		4.11	□□□□□ -1.75
HSH49	YOR319W	YMC1	P32331	307 aa		4.11	□□□□□ -1.75
HSH49	YOR319W	SIP1	P32578	815 aa		4.11	□□□□□ -1.75
HSH49	YOR319W	FUN12	P39730	1002 aa	Known RBP	4.11	□□□□□ -1.75
HSH49	YOR319W	TPA1	P40032	644 aa	Known RBP	4.11	□□□□□ -1.75
HSH49	YOR319W	PIL1	P53252	339 aa	Known RBP	4.11	□□□□□ -1.75
HSH49	YOR319W	INN1	P53901	409 aa		4.11	□□□□□ -1.75
HSH49	YOR319W	RIM13	Q03792	727 aa		4.11	□□□□□ -1.75
HSH49	YOR319W	SEG1	Q04279	960 aa		4.11	□□□□□ -1.75
HSH49	YOR319W	ARP9	Q05123	467 aa		4.11	□□□□□ -1.75
HSH49	YOR319W	UTP21	Q06078	939 aa	Predicted RBP	4.11	□□□□□ -1.75
HSH49	YOR319W	ULA1	Q12059	462 aa		4.11	□□□□□ -1.75
HSH49	YOR319W	BAG7	Q12128	409 aa		4.11	□□□□□ -1.75
HSH49	YOR319W	RRG1	Q12167	365 aa	Predicted RBP	4.11	□□□□□ -1.75
HSH49	YOR319W	ERG11	P10614	530 aa		4.1	□□□□□ -1.75
HSH49	YOR319W	YPK1	P12688	680 aa	Known RBP	4.1	□□□□□ -1.75
HSH49	YOR319W	KAR3	P17119	729 aa		4.1	□□□□□ -1.75
HSH49	YOR319W	RPF2	P36160	344 aa	Known RBP	4.1	□□□□□ -1.75
HSH49	YOR319W	YPT10	P38146	199 aa		4.1	□□□□□ -1.75
HSH49	YOR319W	RTS1	P38903	757 aa		4.1	□□□□□ -1.75
HSH49	YOR319W	LAS21	P40367	830 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms