RNA–Protein interactions for RNA: YNR070W

PDR18, Transcript of Putative transporter of the ATP-binding cassette (ABC) family, yeast

Gene PDR18, Length 4,002 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR18	YNR070W	YHR182W	P38870	785 aa		6.07	□□□□□ -1.44
PDR18	YNR070W	RBL2	P48606	106 aa	Known RBP	6.07	□□□□□ -1.44
PDR18	YNR070W	MNP1	P53163	194 aa	Predicted RBP	6.07	□□□□□ -1.44
PDR18	YNR070W	DBP9	Q06218	594 aa	Known RBP	6.07	□□□□□ -1.44
PDR18	YNR070W	HDA3	Q06623	655 aa		6.07	□□□□□ -1.44
PDR18	YNR070W	HRK1	Q08732	759 aa	Known RBP	6.07	□□□□□ -1.44
PDR18	YNR070W	PMA2	P19657	947 aa		6.07	□□□□□ -1.44
PDR18	YNR070W	PRP22	P24384	1145 aa	Known RBP	6.07	□□□□□ -1.44
PDR18	YNR070W	MEF1	P25039	761 aa		6.07	□□□□□ -1.44
PDR18	YNR070W	RAD27	P26793	382 aa		6.07	□□□□□ -1.44
PDR18	YNR070W	SPT16	P32558	1035 aa	Known RBP	6.07	□□□□□ -1.44
PDR18	YNR070W	CTF13	P35203	478 aa		6.07	□□□□□ -1.44
PDR18	YNR070W	CUE2	P36075	443 aa	Known RBP	6.07	□□□□□ -1.44
PDR18	YNR070W	EXO84	P38261	753 aa		6.07	□□□□□ -1.44
PDR18	YNR070W	SDT1	P53078	280 aa		6.07	□□□□□ -1.44
PDR18	YNR070W	TOF2	Q02208	771 aa		6.07	□□□□□ -1.44
PDR18	YNR070W	VIK1	Q12045	647 aa		6.07	□□□□□ -1.44
PDR18	YNR070W	MSD1	P15179	658 aa	Known RBP	6.06	□□□□□ -1.44
PDR18	YNR070W	ARF2	P19146	181 aa	Known RBP	6.06	□□□□□ -1.44
PDR18	YNR070W	STB6	P36085	766 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	GIP1	P38229	639 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	FAF1	P40546	346 aa	Predicted RBP	6.06	□□□□□ -1.44
PDR18	YNR070W	FIG4	P42837	879 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	PMT3	P47190	753 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	YPR114W	Q06107	315 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	MRI1	Q06489	411 aa	Known RBP	6.06	□□□□□ -1.44
PDR18	YNR070W	UBX3	Q12229	455 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	ATG34	Q12292	412 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	RPS9A	O13516	197 aa	Known RBP	6.06	□□□□□ -1.44
PDR18	YNR070W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	6.06	□□□□□ -1.44	not detected
PDR18	YNR070W	RPL6B	P05739	176 aa	Known RBP	6.06	□□□□□ -1.44
PDR18	YNR070W	CBF1	P17106	351 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	MRPS28	P21771	286 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	STE5	P32917	917 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	TMA108	P40462	946 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	ELP2	P42935	788 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	MTR3	P48240	250 aa	Predicted RBP	6.06	□□□□□ -1.44
PDR18	YNR070W	TMA20	P89886	181 aa	Predicted RBP	6.06	□□□□□ -1.44
PDR18	YNR070W	YML020W	Q03722	664 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	HAP2	P06774	265 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	TRX2	P22803	104 aa	Known RBP	6.06	□□□□□ -1.44
PDR18	YNR070W	PEX34	P25584	144 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	SYN8	P31377	255 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	SKT5	P34226	696 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	BRL1	P38770	471 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	BTT1	P40314	149 aa	Predicted RBP	6.06	□□□□□ -1.44
PDR18	YNR070W	ARG2	P40360	574 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	AIM23	P47015	356 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	ATP22	P50273	684 aa	Predicted RBP	6.06	□□□□□ -1.44
PDR18	YNR070W	TRM112	P53738	135 aa	Predicted RBP	6.06	□□□□□ -1.44
PDR18	YNR070W	NMA111	P53920	997 aa		6.06	□□□□□ -1.44
PDR18	YNR070W	NOB1	Q08444	459 aa	Known RBP	6.06	□□□□□ -1.44
PDR18	YNR070W	SCH9	P11792	824 aa	Known RBP	6.05	□□□□□ -1.44
PDR18	YNR070W	CBS2	P14905	389 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	MSS116	P15424	664 aa	Known RBP	6.05	□□□□□ -1.44
PDR18	YNR070W	RGR1	P19263	1082 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	CDC12	P32468	407 aa	Known RBP	6.05	□□□□□ -1.44
PDR18	YNR070W	YHI9	P38765	294 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	GGA2	P38817	585 aa	Known RBP	6.05	□□□□□ -1.44
PDR18	YNR070W	ALG8	P40351	577 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	MAL11	P53048	616 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	STP1	Q00947	519 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	ROD1	Q02805	837 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	SNZ1	Q03148	297 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	MMT1	Q03218	510 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	MRX10	Q05648	414 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	PUS5	Q06244	254 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	MDY2	Q12285	212 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	YLR278C	Q05854	1341 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	SPS1	P08458	490 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	TUP1	P16649	713 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	EST1	P17214	699 aa	Predicted RBP	6.05	□□□□□ -1.44
PDR18	YNR070W	MF(ALPHA)2	P32435	120 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	GRS1	P38088	690 aa	Known RBP	6.05	□□□□□ -1.44
PDR18	YNR070W	VPS29	P38759	282 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	ALG5	P40350	334 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	SIP4	P46954	829 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	ALY2	P47029	1046 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	TMA22	P47089	198 aa	Predicted RBP	6.05	□□□□□ -1.44
PDR18	YNR070W	USE1	P53146	245 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	GMC2	Q06201	188 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	NTG1	P31378	399 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	MSC7	P38694	644 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	GTR2	P53290	341 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	MUK1	Q02866	612 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	SSL1	Q04673	461 aa	Predicted RBP	6.05	□□□□□ -1.44
PDR18	YNR070W	RCL1	Q08096	367 aa	Predicted RBP	6.05	□□□□□ -1.44
PDR18	YNR070W	APC9	Q12107	265 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	YOR022C	Q12204	715 aa		6.05	□□□□□ -1.44
PDR18	YNR070W	SSO1	P32867	290 aa		6.04	□□□□□ -1.44
PDR18	YNR070W	DOM34	P33309	386 aa		6.04	□□□□□ -1.44
PDR18	YNR070W	SDH3	P33421	198 aa		6.04	□□□□□ -1.44
PDR18	YNR070W	RFS1	P38234	210 aa	Known RBP	6.04	□□□□□ -1.44
PDR18	YNR070W	ACO2	P39533	789 aa		6.04	□□□□□ -1.44
PDR18	YNR070W	GVP36	P40531	326 aa	Known RBP	6.04	□□□□□ -1.44
PDR18	YNR070W	RSM26	P47141	266 aa		6.04	□□□□□ -1.44
PDR18	YNR070W	ISM1	P48526	1002 aa		6.04	□□□□□ -1.44
PDR18	YNR070W	ASI3	P53983	676 aa		6.04	□□□□□ -1.44
PDR18	YNR070W	TRS31	Q03337	283 aa		6.04	□□□□□ -1.44
PDR18	YNR070W	TDA9	Q04545	1251 aa		6.04	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms