RNA–Protein interactions for RNA: YNL242W

ATG2, Transcript of Peripheral membrane protein required for autophagic vesicle formation, yeast

Gene ATG2, Length 4,779 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG2	YNL242W	TGL3	P40308	642 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	CTR1	P49573	406 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	LSC1	P53598	329 aa	Known RBP	4.03	□□□□□ -1.76
ATG2	YNL242W	FYV6	P53913	173 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	RSC4	Q02206	625 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	SAM3	Q08986	587 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	EST1	P17214	699 aa	Predicted RBP	4.03	□□□□□ -1.76
ATG2	YNL242W	SAM2	P19358	384 aa	Known RBP	4.03	□□□□□ -1.76
ATG2	YNL242W	FUB1	P25659	250 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	COQ8	P27697	501 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	RCN1	P36054	211 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	APN2	P38207	520 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	MSR1	P38714	643 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	VMA7	P39111	118 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	PRM2	P40534	656 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	CCT7	P42943	550 aa	Known RBP	4.03	□□□□□ -1.76
ATG2	YNL242W	STB4	P50104	949 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	MAL11	P53048	616 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	CLU1	Q03690	1277 aa	Known RBP	4.03	□□□□□ -1.76
ATG2	YNL242W	RKM2	Q03942	479 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	DYN3	Q04949	312 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	YDR018C	Q12185	396 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	SPB1	P25582	841 aa	Predicted RBP	4.03	□□□□□ -1.76
ATG2	YNL242W	RFS1	P38234	210 aa	Known RBP	4.03	□□□□□ -1.76
ATG2	YNL242W	RIM21	P48565	533 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	YDR222W	Q04925	415 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	PEX10	Q05568	337 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	ATP16	Q12165	160 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	CSR2	Q12734	1121 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	SRN2	Q99176	213 aa		4.03	□□□□□ -1.76
ATG2	YNL242W	TUB3	P09734	445 aa	Known RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	RAD18	P10862	487 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	PEX3	P28795	441 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	CYM1	P32898	989 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	MMS21	P38632	267 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	GEM1	P39722	662 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	EAF5	P39995	279 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	HMF1	P40037	129 aa	Known RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	MMF1	P40185	145 aa	Known RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	MNN11	P46985	422 aa	Known RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	AIM23	P47015	356 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	RAD17	P48581	401 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	HSH155	P49955	971 aa	Known RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	RAI1	P53063	387 aa	Known RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	GET1	P53192	235 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	MRPL13	Q02204	264 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	RNY1	Q02933	434 aa	Known RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	MUS81	Q04149	632 aa	Predicted RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	RSC2	Q06488	889 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	YOL036W	Q08206	761 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	HFI1	Q12060	488 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	ART10	P18634	518 aa	Known RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	RVS161	P25343	265 aa	Known RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	PTC1	P35182	281 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	PCA1	P38360	1216 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	BZZ1	P38822	633 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	SAW1	P39735	261 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	TMN3	P40071	706 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	ESL1	P40456	1118 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	CUS2	P53830	285 aa	Predicted RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	NSE5	Q03718	556 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	SPO20	Q04359	397 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	GSF2	Q04697	403 aa	Known RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	REH1	Q06709	432 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	CRD1	Q07560	283 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	SGT1	Q08446	395 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	PCL8	Q08966	492 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	YDL109C	Q12103	647 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	BAG7	Q12128	409 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	TSC13	Q99190	310 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	FRT1	Q99332	602 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	AI5_ALPHA	Q9ZZX1	630 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	TIM9	O74700	87 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	GRX2	P17695	143 aa	Known RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	MET16	P18408	261 aa	Predicted RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	SPC34	P36131	295 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	AVT2	P39981	480 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	GLG2	P47011	380 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	RTT101	P47050	842 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	LOH1	P47055	219 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	APS3	P47064	194 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	NUT1	P53114	1132 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	RPL6A	Q02326	176 aa	Known RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	RSC9	Q03124	581 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	HRK1	Q08732	759 aa	Known RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	RHO1	P06780	209 aa	Known RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	ADE5,7	P07244	802 aa	Known RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	KIN2	P13186	1147 aa	Known RBP	4.02	□□□□□ -1.77
ATG2	YNL242W	CMP2	P14747	604 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	DBF2	P22204	572 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
ATG2	YNL242W	SLX1	P38324	304 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	FLC2	P39719	783 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	DDI1	P40087	428 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	SCC4	P40090	624 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	NSG2	P53898	299 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	CSN9	Q03981	162 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	YML083C	Q04526	418 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	YDL114W	Q07530	308 aa		4.02	□□□□□ -1.77
ATG2	YNL242W	HSP42	Q12329	375 aa		4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms