RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A ZDS2P54786 942 aa4.03□□□□□ -1.76
YSF3YNL138W-A TRI1Q05024 226 aa4.03□□□□□ -1.76
YSF3YNL138W-A CFT2Q12102 859 aaPredicted RBP4.03□□□□□ -1.76
YSF3YNL138W-A YOL114CQ12322 202 aa4.03□□□□□ -1.76
YSF3YNL138W-A SEN1Q00416 2231 aaKnown RBP4.03□□□□□ -1.76
YSF3YNL138W-A DUR1,2P32528 1835 aaKnown RBP4.02□□□□□ -1.77
YSF3YNL138W-A RPL7AP05737 244 aaKnown RBP4.02□□□□□ -1.77
YSF3YNL138W-A MAD3P47074 515 aa4.02□□□□□ -1.77
YSF3YNL138W-A PIP2P52960 996 aa4.02□□□□□ -1.77
YSF3YNL138W-A ENT2Q05785 613 aa4.02□□□□□ -1.77
YSF3YNL138W-A SLK19Q08581 821 aaKnown RBP4.02□□□□□ -1.77
YSF3YNL138W-A RPL7BQ12213 244 aaKnown RBP4.02□□□□□ -1.77
YSF3YNL138W-A ARP7Q12406 477 aa4.02□□□□□ -1.77
YSF3YNL138W-A GCN1P33892 2672 aaKnown RBP4.01□□□□□ -1.77
YSF3YNL138W-A FMP27Q06179 2628 aa4.01□□□□□ -1.77
YSF3YNL138W-A PMA2P19657 947 aa4.01□□□□□ -1.77
YSF3YNL138W-A VPS34P22543 875 aa4.01□□□□□ -1.77
YSF3YNL138W-A PRE2P30656 287 aaKnown RBP4.01□□□□□ -1.77
YSF3YNL138W-A CDC5P32562 705 aa4.01□□□□□ -1.77
YSF3YNL138W-A VFA1P40080 203 aa4.01□□□□□ -1.77
YSF3YNL138W-A HIS6P40545 261 aa4.01□□□□□ -1.77
YSF3YNL138W-A YFL015CP43578 164 aa4.01□□□□□ -1.77
YSF3YNL138W-A FCP1Q03254 732 aa4.01□□□□□ -1.77
YSF3YNL138W-A TRS31Q03337 283 aa4.01□□□□□ -1.77
YSF3YNL138W-A VPS64Q03944 604 aa4.01□□□□□ -1.77
YSF3YNL138W-A OSW1Q08692 278 aa4.01□□□□□ -1.77
YSF3YNL138W-A PCL8Q08966 492 aa4.01□□□□□ -1.77
YSF3YNL138W-A NDJ1Q12366 352 aa4.01□□□□□ -1.77
YSF3YNL138W-A AAC1P04710 309 aa4□□□□□ -1.77
YSF3YNL138W-A LCB1P25045 558 aaKnown RBP4□□□□□ -1.77
YSF3YNL138W-A MGM1P32266 881 aa4□□□□□ -1.77
YSF3YNL138W-A OCT1P35999 772 aa4□□□□□ -1.77
YSF3YNL138W-A SDH8P38345 138 aa4□□□□□ -1.77
YSF3YNL138W-A POL31P46957 487 aa4□□□□□ -1.77
YSF3YNL138W-A IDS2P46958 469 aa4□□□□□ -1.77
YSF3YNL138W-A TAX4P47030 604 aa4□□□□□ -1.77
YSF3YNL138W-A YJR008WP47085 338 aa4□□□□□ -1.77
YSF3YNL138W-A YNL092WP53934 400 aa4□□□□□ -1.77
YSF3YNL138W-A MOT3P54785 490 aaKnown RBP4□□□□□ -1.77
YSF3YNL138W-A IRC4Q03036 179 aa4□□□□□ -1.77
YSF3YNL138W-A WAR1Q03631 944 aa4□□□□□ -1.77
YSF3YNL138W-A THI7Q05998 598 aa4□□□□□ -1.77
YSF3YNL138W-A MLC2Q06580 163 aa4□□□□□ -1.77
YSF3YNL138W-A AAD4Q07747 329 aa4□□□□□ -1.77
YSF3YNL138W-A AQY1P0CD91 305 aa3.99□□□□□ -1.77
YSF3YNL138W-A RPL40AP0CH08 128 aaKnown RBP3.99□□□□□ -1.77
YSF3YNL138W-A RPL40BP0CH09 128 aaKnown RBP3.99□□□□□ -1.77
YSF3YNL138W-A HOM2P13663 365 aaKnown RBP3.99□□□□□ -1.77
YSF3YNL138W-A PTP2P29461 750 aa3.99□□□□□ -1.77
YSF3YNL138W-A MRPL9P31334 269 aa3.99□□□□□ -1.77
YSF3YNL138W-A YPT53P36019 220 aa3.99□□□□□ -1.77
YSF3YNL138W-A YLF2P38746 405 aa3.99□□□□□ -1.77
YSF3YNL138W-A RRP8P38961 392 aaKnown RBP3.99□□□□□ -1.77
YSF3YNL138W-A QRI7P43122 407 aa3.99□□□□□ -1.77
YSF3YNL138W-A TEP1P53916 434 aa3.99□□□□□ -1.77
YSF3YNL138W-A GFD1Q04839 188 aaKnown RBP3.99□□□□□ -1.77
YSF3YNL138W-A MRI1Q06489 411 aaKnown RBP3.99□□□□□ -1.77
YSF3YNL138W-A THI3Q07471 609 aa3.99□□□□□ -1.77
YSF3YNL138W-A AI5_ALPHAQ9ZZX1 630 aa3.99□□□□□ -1.77
YSF3YNL138W-A ATP4P05626 244 aa3.98□□□□□ -1.77
YSF3YNL138W-A HEM1P09950 548 aaPredicted RBP3.98□□□□□ -1.77
YSF3YNL138W-A ERG11P10614 530 aa3.98□□□□□ -1.77
YSF3YNL138W-A ARB1P40024 610 aaKnown RBP3.98□□□□□ -1.77
YSF3YNL138W-A YJL043WP47053 257 aa3.98□□□□□ -1.77
YSF3YNL138W-A YML122CQ03207 126 aa3.98□□□□□ -1.77
YSF3YNL138W-A YML119WQ03208 357 aa3.98□□□□□ -1.77
YSF3YNL138W-A CRD1Q07560 283 aa3.98□□□□□ -1.77
YSF3YNL138W-A MSS18P08593 268 aa3.97□□□□□ -1.77
YSF3YNL138W-A GDA1P32621 518 aa3.97□□□□□ -1.77
YSF3YNL138W-A APM3P38153 483 aa3.97□□□□□ -1.77
YSF3YNL138W-A ARO9P38840 513 aaPredicted RBP3.97□□□□□ -1.77
YSF3YNL138W-A STT3P39007 718 aaKnown RBP3.97□□□□□ -1.77
YSF3YNL138W-A EXO1P39875 702 aa3.97□□□□□ -1.77
YSF3YNL138W-A ACA1P39970 489 aa3.97□□□□□ -1.77
YSF3YNL138W-A JHD1P40034 492 aa3.97□□□□□ -1.77
YSF3YNL138W-A TAN1P53072 289 aaPredicted RBP3.97□□□□□ -1.77
YSF3YNL138W-A ART5P53244 586 aaKnown RBP3.97□□□□□ -1.77
YSF3YNL138W-A BRE1Q07457 700 aaKnown RBP3.97□□□□□ -1.77
YSF3YNL138W-A YDR524C-BQ3E6R4 66 aa3.97□□□□□ -1.77
YSF3YNL138W-A SWI1P09547 1314 aa3.96□□□□□ -1.77
YSF3YNL138W-A SEC18P18759 758 aaKnown RBP3.96□□□□□ -1.78
YSF3YNL138W-A AMD2P22580 549 aa3.96□□□□□ -1.78
YSF3YNL138W-A YCR061WP25639 631 aa3.96□□□□□ -1.78
YSF3YNL138W-A RPC34P32910 317 aa3.96□□□□□ -1.78
YSF3YNL138W-A HOT13P36078 116 aa3.96□□□□□ -1.78
YSF3YNL138W-A MTG2P38860 518 aa3.96□□□□□ -1.78
YSF3YNL138W-A COQ11Q05892 277 aa3.96□□□□□ -1.78
YSF3YNL138W-A CRT10Q08226 957 aa3.96□□□□□ -1.78
YSF3YNL138W-A AHA1Q12449 350 aaKnown RBP3.96□□□□□ -1.78
YSF3YNL138W-A YNL162W-AQ3E7A8 72 aa3.96□□□□□ -1.78
YSF3YNL138W-A Q0010Q9ZZX9 128 aa3.96□□□□□ -1.78
YSF3YNL138W-A NUP1P20676 1076 aa3.95□□□□□ -1.78
YSF3YNL138W-A SWI4P25302 1093 aaKnown RBP3.95□□□□□ -1.78
YSF3YNL138W-A YJU2P28320 278 aaPredicted RBP3.95□□□□□ -1.78
YSF3YNL138W-A ORC2P32833 620 aa3.95□□□□□ -1.78
YSF3YNL138W-A YHL041WP38730 149 aa3.95□□□□□ -1.78
YSF3YNL138W-A VPS8P39702 1274 aa3.95□□□□□ -1.78
YSF3YNL138W-A VAB2P40003 282 aa3.95□□□□□ -1.78
YSF3YNL138W-A LYS14P40971 790 aa3.95□□□□□ -1.78
YSF3YNL138W-A TDA10P42938 290 aa3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms