RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C AAD15Q08361 143 aa3.54□□□□□ -1.84
SHH3YMR118C YOR059CQ08448 450 aaKnown RBP3.54□□□□□ -1.84
SHH3YMR118C RPN8Q08723 338 aaKnown RBP3.54□□□□□ -1.84
SHH3YMR118C LAP2Q10740 671 aa3.54□□□□□ -1.84
SHH3YMR118C NTO1Q12311 748 aa3.54□□□□□ -1.84
SHH3YMR118C BRR1Q99177 341 aaPredicted RBP3.54□□□□□ -1.84
SHH3YMR118C VCX1Q99385 411 aa3.54□□□□□ -1.84
SHH3YMR118C BI3Q9ZZW7 517 aa3.54□□□□□ -1.84
SHH3YMR118C AI5_BETAQ9ZZX0 354 aa3.54□□□□□ -1.84
SHH3YMR118C YER152CP10356 443 aa3.53□□□□□ -1.84
SHH3YMR118C MSS116P15424 664 aaKnown RBP3.53□□□□□ -1.84
SHH3YMR118C CDC42P19073 191 aa3.53□□□□□ -1.84
SHH3YMR118C TRX1P22217 103 aaKnown RBP3.53□□□□□ -1.84
SHH3YMR118C URE2P23202 354 aaKnown RBP3.53□□□□□ -1.84
SHH3YMR118C CDC20P26309 610 aa3.53□□□□□ -1.84
SHH3YMR118C TMT1P32643 299 aa3.53□□□□□ -1.84
SHH3YMR118C YKU70P32807 602 aa3.53□□□□□ -1.84
SHH3YMR118C BCS1P32839 456 aa3.53□□□□□ -1.84
SHH3YMR118C CYM1P32898 989 aa3.53□□□□□ -1.84
SHH3YMR118C YKL222CP35995 705 aa3.53□□□□□ -1.84
SHH3YMR118C UBP11P36026 717 aa3.53□□□□□ -1.84
SHH3YMR118C NTR2P36118 322 aaPredicted RBP3.53□□□□□ -1.84
SHH3YMR118C YBL028CP38202 106 aa3.53□□□□□ -1.84
SHH3YMR118C YBR138CP38277 524 aa3.53□□□□□ -1.84
SHH3YMR118C YBR259WP38338 688 aa3.53□□□□□ -1.84
SHH3YMR118C PHO89P38361 574 aa3.53□□□□□ -1.84
SHH3YMR118C APE4P38821 490 aa3.53□□□□□ -1.84
SHH3YMR118C UTP9P38882 575 aaKnown RBP3.53□□□□□ -1.84
SHH3YMR118C CKB2P38930 258 aa3.53□□□□□ -1.84
SHH3YMR118C RAD55P38953 406 aa3.53□□□□□ -1.84
SHH3YMR118C SHU2P38957 223 aa3.53□□□□□ -1.84
SHH3YMR118C FLC2P39719 783 aa3.53□□□□□ -1.84
SHH3YMR118C CCT7P42943 550 aaKnown RBP3.53□□□□□ -1.84
SHH3YMR118C POL31P46957 487 aa3.53□□□□□ -1.84
SHH3YMR118C TY4A-JP47023 414 aa3.53□□□□□ -1.84
SHH3YMR118C ALY2P47029 1046 aa3.53□□□□□ -1.84
SHH3YMR118C ECL1P48235 211 aa3.53□□□□□ -1.84
SHH3YMR118C TRF5P48561 642 aaKnown RBP3.53□□□□□ -1.84
SHH3YMR118C IMD4P50094 524 aaKnown RBP3.53□□□□□ -1.84
SHH3YMR118C LIF1P53150 421 aa3.53□□□□□ -1.84
SHH3YMR118C PRO2P54885 456 aaKnown RBP3.53□□□□□ -1.84
SHH3YMR118C SKI8Q02793 397 aaPredicted RBP3.53□□□□□ -1.84
SHH3YMR118C NAN1Q02931 896 aaKnown RBP3.53□□□□□ -1.84
SHH3YMR118C CWC15Q03772 175 aaKnown RBP3.53□□□□□ -1.84
SHH3YMR118C PLP1Q04004 230 aa3.53□□□□□ -1.84
SHH3YMR118C SMP3Q04174 516 aa3.53□□□□□ -1.84
SHH3YMR118C YET2Q04210 160 aa3.53□□□□□ -1.84
SHH3YMR118C ARR1Q06596 294 aa3.53□□□□□ -1.84
SHH3YMR118C YDL114WQ07530 308 aa3.53□□□□□ -1.84
SHH3YMR118C CRD1Q07560 283 aa3.53□□□□□ -1.84
SHH3YMR118C PEX15Q08215 383 aa3.53□□□□□ -1.84
SHH3YMR118C CUE5Q08412 411 aaKnown RBP3.53□□□□□ -1.84
SHH3YMR118C RRG1Q12167 365 aaPredicted RBP3.53□□□□□ -1.84
SHH3YMR118C NFI1Q12216 726 aa3.53□□□□□ -1.84
SHH3YMR118C NSI1Q12457 570 aa3.53□□□□□ -1.84
SHH3YMR118C KCS1Q12494 1050 aa3.53□□□□□ -1.84
SHH3YMR118C AVL9Q12500 764 aa3.53□□□□□ -1.84
SHH3YMR118C TIF6Q12522 245 aaKnown RBP3.53□□□□□ -1.84
SHH3YMR118C DFG16Q99234 619 aa3.53□□□□□ -1.84
SHH3YMR118C ECM3Q99252 613 aa3.53□□□□□ -1.84
SHH3YMR118C REP1P03871 373 aa3.52□□□□□ -1.85
SHH3YMR118C PHR1P05066 565 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
SHH3YMR118C COR1P07256 457 aa3.52□□□□□ -1.85
SHH3YMR118C HSF1P10961 833 aa3.52□□□□□ -1.85
SHH3YMR118C EST1P17214 699 aaPredicted RBP3.52□□□□□ -1.85
SHH3YMR118C COX11P19516 300 aaKnown RBP3.52□□□□□ -1.85
SHH3YMR118C MEI4P29467 408 aa3.52□□□□□ -1.85
SHH3YMR118C URA10P30402 227 aa3.52□□□□□ -1.85
SHH3YMR118C ITR2P30606 609 aa3.52□□□□□ -1.85
SHH3YMR118C CCR4P31384 837 aaKnown RBP3.52□□□□□ -1.85
SHH3YMR118C SSE2P32590 693 aaKnown RBP3.52□□□□□ -1.85
SHH3YMR118C TFB1P32776 642 aa3.52□□□□□ -1.85
SHH3YMR118C WHI3P34761 661 aaKnown RBP3.52□□□□□ -1.85
SHH3YMR118C PHO88P38264 188 aaPredicted RBP3.52□□□□□ -1.85
SHH3YMR118C SWC5P38326 303 aa3.52□□□□□ -1.85
SHH3YMR118C GOS1P38736 223 aa3.52□□□□□ -1.85
SHH3YMR118C BZZ1P38822 633 aa3.52□□□□□ -1.85
SHH3YMR118C FAA2P39518 744 aa3.52□□□□□ -1.85
SHH3YMR118C DSE1P40077 573 aa3.52□□□□□ -1.85
SHH3YMR118C NIT1P40447 199 aa3.52□□□□□ -1.85
SHH3YMR118C MET18P40469 1032 aa3.52□□□□□ -1.85
SHH3YMR118C HPM1P40481 377 aa3.52□□□□□ -1.85
SHH3YMR118C FET4P40988 552 aa3.52□□□□□ -1.85
SHH3YMR118C SNZ3P43545 298 aa3.52□□□□□ -1.85
SHH3YMR118C YJL055WP47044 245 aa3.52□□□□□ -1.85
SHH3YMR118C TAH11P47112 604 aa3.52□□□□□ -1.85
SHH3YMR118C PUS2P53167 370 aa3.52□□□□□ -1.85
SHH3YMR118C SOL4P53315 255 aa3.52□□□□□ -1.85
SHH3YMR118C SNZ2P53824 298 aa3.52□□□□□ -1.85
SHH3YMR118C YNL058CP53947 316 aa3.52□□□□□ -1.85
SHH3YMR118C TIM11P81449 96 aaPredicted RBP3.52□□□□□ -1.85
SHH3YMR118C MMT1Q03218 510 aa3.52□□□□□ -1.85
SHH3YMR118C YMR209CQ03648 457 aa3.52□□□□□ -1.85
SHH3YMR118C TAF11Q04226 346 aa3.52□□□□□ -1.85
SHH3YMR118C SVF1Q05515 481 aa3.52□□□□□ -1.85
SHH3YMR118C COQ9Q05779 260 aa3.52□□□□□ -1.85
SHH3YMR118C SEC10Q06245 871 aa3.52□□□□□ -1.85
SHH3YMR118C CDA1Q06702 301 aa3.52□□□□□ -1.85
SHH3YMR118C THI20Q08224 551 aa3.52□□□□□ -1.85
SHH3YMR118C TMA46Q12000 345 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 46.1 ms