RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W SSP2Q08646 371 aa3.71□□□□□ -1.82
CST9YLR394W CIR2Q08822 631 aa3.71□□□□□ -1.82
CST9YLR394W YPL191CQ08930 360 aa3.71□□□□□ -1.82
CST9YLR394W TY2A-BQ12260 438 aa3.71□□□□□ -1.82
CST9YLR394W TY2A-OR2Q12293 438 aa3.71□□□□□ -1.82
CST9YLR394W TY2A-DR1Q12392 438 aa3.71□□□□□ -1.82
CST9YLR394W TY2A-OR1Q12439 438 aa3.71□□□□□ -1.82
CST9YLR394W TY2A-DR3Q99303 438 aa3.71□□□□□ -1.82
CST9YLR394W LAC1P28496 418 aa3.7□□□□□ -1.82
CST9YLR394W CDC1P40986 491 aa3.7□□□□□ -1.82
CST9YLR394W CIR1P42940 261 aa3.7□□□□□ -1.82
CST9YLR394W ATP23P53722 227 aa3.7□□□□□ -1.82
CST9YLR394W ADE16P54113 591 aaKnown RBP3.7□□□□□ -1.82
CST9YLR394W ECM16Q04217 1267 aaKnown RBP3.7□□□□□ -1.82
CST9YLR394W TDA9Q04545 1251 aa3.7□□□□□ -1.82
CST9YLR394W LRE1P25579 583 aaKnown RBP3.7□□□□□ -1.82
CST9YLR394W PTC6P25646 442 aa3.7□□□□□ -1.82
CST9YLR394W GCD7P32502 381 aaPredicted RBP3.7□□□□□ -1.82
CST9YLR394W RSC9Q03124 581 aa3.7□□□□□ -1.82
CST9YLR394W YDR109CQ04585 715 aa3.7□□□□□ -1.82
CST9YLR394W TMA16Q08687 178 aa3.7□□□□□ -1.82
CST9YLR394W SSM4P40318 1319 aa3.69□□□□□ -1.82
CST9YLR394W CET1O13297 549 aaPredicted RBP3.69□□□□□ -1.82
CST9YLR394W TPK1P06244 397 aa3.69□□□□□ -1.82
CST9YLR394W SRP54P20424 541 aaKnown RBP3.69□□□□□ -1.82
CST9YLR394W RRN3P36070 627 aa3.69□□□□□ -1.82
CST9YLR394W APD1P38281 316 aa3.69□□□□□ -1.82
CST9YLR394W FMP10P40098 244 aa3.69□□□□□ -1.82
CST9YLR394W FAF1P40546 346 aaPredicted RBP3.69□□□□□ -1.82
CST9YLR394W SKP2P42843 763 aa3.69□□□□□ -1.82
CST9YLR394W NMD5P46970 1048 aa3.69□□□□□ -1.82
CST9YLR394W REG1Q00816 1014 aa3.69□□□□□ -1.82
CST9YLR394W ATG23Q06671 453 aa3.69□□□□□ -1.82
CST9YLR394W LEA1Q08963 238 aaPredicted RBP3.69□□□□□ -1.82
CST9YLR394W NEW1Q08972 1196 aaKnown RBP3.69□□□□□ -1.82
CST9YLR394W SWT1Q12104 458 aa3.69□□□□□ -1.82
CST9YLR394W RAD16P31244 790 aa3.68□□□□□ -1.82
CST9YLR394W SWC3P31376 625 aa3.68□□□□□ -1.82
CST9YLR394W FUN12P39730 1002 aaKnown RBP3.68□□□□□ -1.82
CST9YLR394W IML2P47031 731 aa3.68□□□□□ -1.82
CST9YLR394W SNO4Q04902 237 aa3.68□□□□□ -1.82
CST9YLR394W HSP33Q08914 237 aaKnown RBP3.68□□□□□ -1.82
CST9YLR394W HSP32Q08992 237 aa3.68□□□□□ -1.82
CST9YLR394W BAG7Q12128 409 aa3.68□□□□□ -1.82
CST9YLR394W YOL087CQ99247 1116 aa3.68□□□□□ -1.82
CST9YLR394W REV3P14284 1504 aa3.67□□□□□ -1.82
CST9YLR394W PEP1P32319 1579 aa3.67□□□□□ -1.82
CST9YLR394W GAL4P04386 881 aa3.67□□□□□ -1.82
CST9YLR394W ILV2P07342 687 aaKnown RBP3.67□□□□□ -1.82
CST9YLR394W YMR085WP0CF18 432 aa3.67□□□□□ -1.82
CST9YLR394W ERG8P24521 451 aa3.67□□□□□ -1.82
CST9YLR394W SLC1P33333 303 aa3.67□□□□□ -1.82
CST9YLR394W MRPL36P36531 177 aa3.67□□□□□ -1.82
CST9YLR394W YER010CP40011 234 aa3.67□□□□□ -1.82
CST9YLR394W DPH1P40487 425 aaKnown RBP3.67□□□□□ -1.82
CST9YLR394W ULP2P40537 1034 aaPredicted RBP3.67□□□□□ -1.82
CST9YLR394W DJP1P40564 432 aa3.67□□□□□ -1.82
CST9YLR394W SWP82P43554 623 aa3.67□□□□□ -1.82
CST9YLR394W UBX6P47049 396 aa3.67□□□□□ -1.82
CST9YLR394W YRB30P53107 440 aaPredicted RBP3.67□□□□□ -1.82
CST9YLR394W MEP3P53390 489 aa3.67□□□□□ -1.82
CST9YLR394W YPL071CQ02864 156 aa3.67□□□□□ -1.82
CST9YLR394W SNU56Q03782 492 aaKnown RBP3.67□□□□□ -1.82
CST9YLR394W TPO3Q06451 622 aa3.67□□□□□ -1.82
CST9YLR394W YOR389WQ08912 624 aa3.67□□□□□ -1.82
CST9YLR394W VCX1Q99385 411 aa3.67□□□□□ -1.82
CST9YLR394W BI2P03873 423 aa3.66□□□□□ -1.82
CST9YLR394W PHM8P40025 321 aa3.66□□□□□ -1.82
CST9YLR394W PSK2Q08217 1101 aa3.66□□□□□ -1.82
CST9YLR394W MCM10P32354 571 aa3.65□□□□□ -1.83
CST9YLR394W CBF2P32504 956 aa3.65□□□□□ -1.83
CST9YLR394W NUP120P35729 1037 aa3.65□□□□□ -1.83
CST9YLR394W TEF4P36008 412 aaKnown RBP3.65□□□□□ -1.83
CST9YLR394W ADE17P38009 592 aaKnown RBP3.65□□□□□ -1.83
CST9YLR394W UBP13P38187 747 aa3.65□□□□□ -1.83
CST9YLR394W VID27P40157 782 aa3.65□□□□□ -1.83
CST9YLR394W YIL161WP40449 235 aaKnown RBP3.65□□□□□ -1.83
CST9YLR394W IRC7P43623 340 aa3.65□□□□□ -1.83
CST9YLR394W IDP3P53982 420 aaKnown RBP3.65□□□□□ -1.83
CST9YLR394W STP1Q00947 519 aa3.65□□□□□ -1.83
CST9YLR394W AAT1Q01802 451 aa3.65□□□□□ -1.83
CST9YLR394W CRN1Q06440 651 aa3.65□□□□□ -1.83
CST9YLR394W GEP3Q08622 556 aa3.65□□□□□ -1.83
CST9YLR394W PFA4Q12006 378 aa3.65□□□□□ -1.83
CST9YLR394W YER145C-AA0A023PYF4 145 aa3.64□□□□□ -1.83
CST9YLR394W CHO1P08456 276 aa3.64□□□□□ -1.83
CST9YLR394W RPB2P08518 1224 aaKnown RBP3.64□□□□□ -1.83
CST9YLR394W SPO16P17122 198 aa3.64□□□□□ -1.83
CST9YLR394W URE2P23202 354 aaKnown RBP3.64□□□□□ -1.83
CST9YLR394W SRB5P32585 307 aa3.64□□□□□ -1.83
CST9YLR394W MEP2P41948 499 aa3.64□□□□□ -1.83
CST9YLR394W ASE1P50275 885 aa3.64□□□□□ -1.83
CST9YLR394W SWA2Q06677 668 aa3.64□□□□□ -1.83
CST9YLR394W THI3Q07471 609 aa3.64□□□□□ -1.83
CST9YLR394W YOR019WQ99248 730 aa3.64□□□□□ -1.83
CST9YLR394W YPT1P01123 206 aaKnown RBP3.63□□□□□ -1.83
CST9YLR394W PET111P08468 800 aa3.63□□□□□ -1.83
CST9YLR394W PFK2P16862 959 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
CST9YLR394W MRP20P32387 263 aa3.63□□□□□ -1.83
CST9YLR394W ECM32P32644 1121 aaKnown RBP3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 84.7 ms