RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W YGL036WP53185 909 aaPredicted RBP2.75□□□□□ -1.97
SEC22YLR268W TRS31Q03337 283 aa2.75□□□□□ -1.97
SEC22YLR268W DIN7Q12086 430 aa2.75□□□□□ -1.97
SEC22YLR268W RTK1Q12100 620 aaPredicted RBP2.75□□□□□ -1.97
SEC22YLR268W TIF3P34167 436 aaKnown RBP2.74□□□□□ -1.97
SEC22YLR268W TOM20P35180 183 aa2.74□□□□□ -1.97
SEC22YLR268W SDS22P36047 338 aa2.74□□□□□ -1.97
SEC22YLR268W FUN12P39730 1002 aaKnown RBP2.74□□□□□ -1.97
SEC22YLR268W IML2P47031 731 aa2.74□□□□□ -1.97
SEC22YLR268W UBX6P47049 396 aa2.74□□□□□ -1.97
SEC22YLR268W SHE10P53075 577 aa2.74□□□□□ -1.97
SEC22YLR268W YPR003CP53394 754 aa2.74□□□□□ -1.97
SEC22YLR268W YNL034WP53963 612 aa2.74□□□□□ -1.97
SEC22YLR268W VPS64Q03944 604 aa2.74□□□□□ -1.97
SEC22YLR268W DBP10Q12389 995 aaKnown RBP2.74□□□□□ -1.97
SEC22YLR268W SAN1P22470 610 aa2.73□□□□□ -1.97
SEC22YLR268W SAW1P39735 261 aa2.73□□□□□ -1.97
SEC22YLR268W ATG27P46989 271 aa2.73□□□□□ -1.97
SEC22YLR268W FOL1P53848 824 aa2.73□□□□□ -1.97
SEC22YLR268W COG6P53959 839 aa2.73□□□□□ -1.97
SEC22YLR268W IOC4Q04213 475 aa2.73□□□□□ -1.97
SEC22YLR268W ECM38Q05902 660 aaPredicted RBP2.73□□□□□ -1.97
SEC22YLR268W VAS1P07806 1104 aaKnown RBP2.72□□□□□ -1.97
SEC22YLR268W PHO3P24031 467 aa2.72□□□□□ -1.97
SEC22YLR268W RPS7AP26786 190 aaKnown RBP2.72□□□□□ -1.97
SEC22YLR268W HEM12P32347 362 aaPredicted RBP2.72□□□□□ -1.97
SEC22YLR268W RAD24P32641 659 aa2.72□□□□□ -1.97
SEC22YLR268W TGL1P34163 548 aa2.72□□□□□ -1.97
SEC22YLR268W PEX14P53112 341 aa2.72□□□□□ -1.97
SEC22YLR268W YNL181WP53878 407 aa2.72□□□□□ -1.97
SEC22YLR268W CRD1Q07560 283 aa2.72□□□□□ -1.97
SEC22YLR268W YBR255C-AQ3E776 120 aa2.72□□□□□ -1.97
SEC22YLR268W CYB2P00175 591 aa2.71□□□□□ -1.98
SEC22YLR268W LAC1P28496 418 aa2.71□□□□□ -1.98
SEC22YLR268W TFC4P33339 1025 aa2.71□□□□□ -1.98
SEC22YLR268W KRE9P39005 276 aa2.71□□□□□ -1.98
SEC22YLR268W ARB1P40024 610 aaKnown RBP2.71□□□□□ -1.98
SEC22YLR268W MKT1P40850 830 aaKnown RBP2.71□□□□□ -1.98
SEC22YLR268W POL31P46957 487 aa2.71□□□□□ -1.98
SEC22YLR268W RPN2P32565 945 aaKnown RBP2.7□□□□□ -1.98
SEC22YLR268W GRX7P38068 203 aa2.7□□□□□ -1.98
SEC22YLR268W ENP1P38333 483 aaKnown RBP2.7□□□□□ -1.98
SEC22YLR268W LEU5P38702 357 aa2.7□□□□□ -1.98
SEC22YLR268W YLF2P38746 405 aa2.7□□□□□ -1.98
SEC22YLR268W SCS2P40075 244 aaKnown RBP2.7□□□□□ -1.98
SEC22YLR268W YJR061WP40355 935 aa2.7□□□□□ -1.98
SEC22YLR268W NPA3P47122 385 aa2.7□□□□□ -1.98
SEC22YLR268W ADD37Q03233 198 aa2.7□□□□□ -1.98
SEC22YLR268W PHM6Q05637 104 aa2.7□□□□□ -1.98
SEC22YLR268W BSC6Q08280 497 aa2.7□□□□□ -1.98
SEC22YLR268W FRE3Q08905 711 aa2.7□□□□□ -1.98
SEC22YLR268W SLX4Q12098 748 aa2.7□□□□□ -1.98
SEC22YLR268W SUI3P09064 285 aaKnown RBP2.69□□□□□ -1.98
SEC22YLR268W BAR1P12630 587 aa2.69□□□□□ -1.98
SEC22YLR268W CBS2P14905 389 aa2.69□□□□□ -1.98
SEC22YLR268W YCR006CP25350 157 aa2.69□□□□□ -1.98
SEC22YLR268W PRO3P32263 286 aaKnown RBP2.69□□□□□ -1.98
SEC22YLR268W AVT5P38176 459 aa2.69□□□□□ -1.98
SEC22YLR268W YHR218WP38899 603 aa2.69□□□□□ -1.98
SEC22YLR268W YPL108WQ02872 168 aaPredicted RBP2.69□□□□□ -1.98
SEC22YLR268W NUR1Q12066 484 aa2.69□□□□□ -1.98
SEC22YLR268W DAP1Q12091 152 aa2.69□□□□□ -1.98
SEC22YLR268W CBP1P07252 654 aa2.68□□□□□ -1.98
SEC22YLR268W MSH1P25846 959 aa2.68□□□□□ -1.98
SEC22YLR268W HES1P35843 434 aa2.68□□□□□ -1.98
SEC22YLR268W MRPL4P36517 319 aa2.68□□□□□ -1.98
SEC22YLR268W RIM2P38127 377 aa2.68□□□□□ -1.98
SEC22YLR268W PEX8P53248 589 aa2.68□□□□□ -1.98
SEC22YLR268W ESF2P53743 316 aaKnown RBP2.68□□□□□ -1.98
SEC22YLR268W YDR109CQ04585 715 aa2.68□□□□□ -1.98
SEC22YLR268W AAD4Q07747 329 aa2.68□□□□□ -1.98
SEC22YLR268W PPT2Q12036 173 aa2.68□□□□□ -1.98
SEC22YLR268W YLR049CQ12110 428 aa2.68□□□□□ -1.98
SEC22YLR268W RVB2Q12464 471 aaKnown RBP2.68□□□□□ -1.98
SEC22YLR268W TMA7Q3E764 64 aaKnown RBP2.68□□□□□ -1.98
SEC22YLR268W COX1P00401 534 aa2.67□□□□□ -1.98
SEC22YLR268W GPA1P08539 472 aa2.67□□□□□ -1.98
SEC22YLR268W MRP2P10663 115 aaPredicted RBP2.67□□□□□ -1.98
SEC22YLR268W MGR1P25573 417 aa2.67□□□□□ -1.98
SEC22YLR268W PHM8P40025 321 aa2.67□□□□□ -1.98
SEC22YLR268W AIM6Q07716 390 aa2.67□□□□□ -1.98
SEC22YLR268W PDA1P16387 420 aaKnown RBP2.66□□□□□ -1.98
SEC22YLR268W BUD14P27637 709 aa2.66□□□□□ -1.98
SEC22YLR268W PCA1P38360 1216 aa2.66□□□□□ -1.98
SEC22YLR268W YJR008WP47085 338 aa2.66□□□□□ -1.98
SEC22YLR268W RSF1Q05043 376 aa2.66□□□□□ -1.98
SEC22YLR268W GUK1P15454 187 aaKnown RBP2.65□□□□□ -1.99
SEC22YLR268W GCD7P32502 381 aaPredicted RBP2.65□□□□□ -1.99
SEC22YLR268W SWH1P35845 1188 aa2.65□□□□□ -1.99
SEC22YLR268W YPK3P38070 525 aa2.65□□□□□ -1.99
SEC22YLR268W YEL068CP39977 110 aa2.65□□□□□ -1.99
SEC22YLR268W ZAP1P47043 880 aa2.65□□□□□ -1.99
SEC22YLR268W YNL234WP53857 426 aa2.65□□□□□ -1.99
SEC22YLR268W TGL2P54857 326 aa2.65□□□□□ -1.99
SEC22YLR268W UTP21Q06078 939 aaPredicted RBP2.65□□□□□ -1.99
SEC22YLR268W YOL057WQ08225 711 aa2.65□□□□□ -1.99
SEC22YLR268W MPD2Q99316 277 aa2.65□□□□□ -1.99
SEC22YLR268W ATP4P05626 244 aa2.64□□□□□ -1.99
SEC22YLR268W SST2P11972 698 aaKnown RBP2.64□□□□□ -1.99
SEC22YLR268W LDB16P25587 256 aa2.64□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms