RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeast

Gene SHB17, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHB17	YKR043C	BRF1	P29056	596 aa		10.31	□□□□□ -0.76
SHB17	YKR043C	TPS2	P31688	896 aa	Known RBP	10.31	□□□□□ -0.76
SHB17	YKR043C	PLC1	P32383	869 aa		10.31	□□□□□ -0.76
SHB17	YKR043C	WSC4	P38739	605 aa		10.31	□□□□□ -0.76
SHB17	YKR043C	SET2	P46995	733 aa	Known RBP	10.31	□□□□□ -0.76
SHB17	YKR043C	YDR132C	Q03900	495 aa		10.31	□□□□□ -0.76
SHB17	YKR043C	PPN1	Q04119	674 aa		10.31	□□□□□ -0.76
SHB17	YKR043C	ATG23	Q06671	453 aa		10.31	□□□□□ -0.76
SHB17	YKR043C	SAM4	Q08985	325 aa	Known RBP	10.31	□□□□□ -0.76
SHB17	YKR043C	MPH2	P0CD99	609 aa		10.3	□□□□□ -0.76
SHB17	YKR043C	PEP5	P12868	1029 aa		10.3	□□□□□ -0.76
SHB17	YKR043C	CDC20	P26309	610 aa		10.3	□□□□□ -0.76
SHB17	YKR043C	SLX8	P40072	274 aa		10.3	□□□□□ -0.76
SHB17	YKR043C	TES1	P41903	349 aa	Known RBP	10.3	□□□□□ -0.76
SHB17	YKR043C	MTO1	P53070	669 aa		10.3	□□□□□ -0.76
SHB17	YKR043C	RRB1	Q04225	511 aa	Known RBP	10.3	□□□□□ -0.76
SHB17	YKR043C	SLD7	Q08457	257 aa		10.3	□□□□□ -0.76
SHB17	YKR043C	MPC54	Q08550	464 aa		10.3	□□□□□ -0.76
SHB17	YKR043C	GNT1	Q12096	491 aa		10.3	□□□□□ -0.76
SHB17	YKR043C	Q0182	Q9ZZW1	134 aa		10.3	□□□□□ -0.76
SHB17	YKR043C	SMI1	P32566	505 aa		10.29	□□□□□ -0.76
SHB17	YKR043C	PHO11	P35842	467 aa		10.29	□□□□□ -0.76
SHB17	YKR043C	OLA1	P38219	394 aa	Known RBP	10.29	□□□□□ -0.76
SHB17	YKR043C	PHO12	P38693	467 aa		10.29	□□□□□ -0.76
SHB17	YKR043C	RGI2	P40188	164 aa		10.29	□□□□□ -0.76
SHB17	YKR043C	CPR6	P53691	371 aa	Known RBP	10.29	□□□□□ -0.76
SHB17	YKR043C	MCP2	Q06567	569 aa		10.29	□□□□□ -0.76
SHB17	YKR043C	FMP27	Q06179	2628 aa		10.29	□□□□□ -0.76
SHB17	YKR043C	CMD1	P06787	147 aa	Known RBP	10.28	□□□□□ -0.76
SHB17	YKR043C	YCL068C	P25593	260 aa		10.28	□□□□□ -0.76
SHB17	YKR043C	URA7	P28274	579 aa	Known RBP	10.28	□□□□□ -0.76
SHB17	YKR043C	PEX5	P35056	612 aa		10.28	□□□□□ -0.76
SHB17	YKR043C	CTF13	P35203	478 aa		10.28	□□□□□ -0.76
SHB17	YKR043C	TAE1	P38340	232 aa		10.28	□□□□□ -0.76
SHB17	YKR043C	LRP1	P38801	184 aa	Known RBP	10.28	□□□□□ -0.76
SHB17	YKR043C	YFL012W	P43580	148 aa		10.28	□□□□□ -0.76
SHB17	YKR043C	YNL143C	P53908	130 aa		10.28	□□□□□ -0.76
SHB17	YKR043C	COG6	P53959	839 aa		10.28	□□□□□ -0.76
SHB17	YKR043C	EFM6	P53970	246 aa		10.28	□□□□□ -0.76
SHB17	YKR043C	TRS31	Q03337	283 aa		10.28	□□□□□ -0.76
SHB17	YKR043C	YDR131C	Q03899	556 aa		10.28	□□□□□ -0.76
SHB17	YKR043C	GSF2	Q04697	403 aa	Known RBP	10.28	□□□□□ -0.76
SHB17	YKR043C	NOP6	Q07623	225 aa	Known RBP	10.28	□□□□□ -0.76
SHB17	YKR043C	NUR1	Q12066	484 aa		10.28	□□□□□ -0.76
SHB17	YKR043C	NAG1	Q8TGN9	163 aa		10.28	□□□□□ -0.76
SHB17	YKR043C	FRT1	Q99332	602 aa		10.28	□□□□□ -0.76
SHB17	YKR043C	CDC8	P00572	216 aa		10.27	□□□□□ -0.77
SHB17	YKR043C	TEF1	P02994	458 aa	Known RBP	10.27	□□□□□ -0.77
SHB17	YKR043C	GAL11	P19659	1081 aa		10.27	□□□□□ -0.77
SHB17	YKR043C	IMP3	P32899	183 aa	Predicted RBP	10.27	□□□□□ -0.77
SHB17	YKR043C	YKL151C	P36059	337 aa		10.27	□□□□□ -0.77
SHB17	YKR043C	PFS1	P38872	237 aa		10.27	□□□□□ -0.77
SHB17	YKR043C	RPH1	P39956	796 aa		10.27	□□□□□ -0.77
SHB17	YKR043C	INA22	P40576	216 aa		10.27	□□□□□ -0.77
SHB17	YKR043C	SAE2	P46946	345 aa		10.27	□□□□□ -0.77
SHB17	YKR043C	ATG10	Q07879	167 aa		10.27	□□□□□ -0.77
SHB17	YKR043C	BUD20	Q08004	166 aa	Predicted RBP	10.27	□□□□□ -0.77
SHB17	YKR043C	HEM15	P16622	393 aa		10.26	□□□□□ -0.77
SHB17	YKR043C	RPO26	P20435	155 aa		10.26	□□□□□ -0.77
SHB17	YKR043C	URA10	P30402	227 aa		10.26	□□□□□ -0.77
SHB17	YKR043C	TFB1	P32776	642 aa		10.26	□□□□□ -0.77
SHB17	YKR043C	SLX5	P32828	619 aa	Known RBP	10.26	□□□□□ -0.77
SHB17	YKR043C	RRP1	P35178	278 aa	Predicted RBP	10.26	□□□□□ -0.77
SHB17	YKR043C	LAS1	P36146	502 aa	Predicted RBP	10.26	□□□□□ -0.77
SHB17	YKR043C	GND1	P38720	489 aa	Known RBP	10.26	□□□□□ -0.77
SHB17	YKR043C	SEO1	P39709	593 aa		10.26	□□□□□ -0.77
SHB17	YKR043C	TIF34	P40217	347 aa	Known RBP	10.26	□□□□□ -0.77
SHB17	YKR043C	MNN10	P50108	393 aa	Known RBP	10.26	□□□□□ -0.77
SHB17	YKR043C	NBP35	P52920	328 aa		10.26	□□□□□ -0.77
SHB17	YKR043C	SWC4	P53201	476 aa		10.26	□□□□□ -0.77
SHB17	YKR043C	SNO2	P53823	222 aa		10.26	□□□□□ -0.77
SHB17	YKR043C	NOP15	P53927	220 aa	Predicted RBP	10.26	□□□□□ -0.77
SHB17	YKR043C	YPL113C	Q02961	396 aa		10.26	□□□□□ -0.77
SHB17	YKR043C	NHX1	Q04121	633 aa		10.26	□□□□□ -0.77
SHB17	YKR043C	CUE5	Q08412	411 aa	Known RBP	10.26	□□□□□ -0.77
SHB17	YKR043C	UBR1	P19812	1950 aa		10.26	□□□□□ -0.77
SHB17	YKR043C	ERG20	P08524	352 aa	Known RBP	10.25	□□□□□ -0.77
SHB17	YKR043C	HSP60	P19882	572 aa	Known RBP	10.25	□□□□□ -0.77
SHB17	YKR043C	UBA1	P22515	1024 aa	Known RBP	10.25	□□□□□ -0.77
SHB17	YKR043C	MRP21	P38175	177 aa		10.25	□□□□□ -0.77
SHB17	YKR043C	YBR259W	P38338	688 aa		10.25	□□□□□ -0.77
SHB17	YKR043C	TIM17	P39515	158 aa		10.25	□□□□□ -0.77
SHB17	YKR043C	YJL070C	P40361	888 aa		10.25	□□□□□ -0.77
SHB17	YKR043C	CEP3	P40969	608 aa		10.25	□□□□□ -0.77
SHB17	YKR043C	DAN4	P47179	1161 aa		10.25	□□□□□ -0.77
SHB17	YKR043C	HOS3	Q02959	697 aa	Known RBP	10.25	□□□□□ -0.77
SHB17	YKR043C	YMR027W	Q04371	470 aa		10.25	□□□□□ -0.77
SHB17	YKR043C	SUC2	P00724	532 aa		10.24	□□□□□ -0.77
SHB17	YKR043C	INO1	P11986	533 aa		10.24	□□□□□ -0.77
SHB17	YKR043C	SLD2	P34252	453 aa		10.24	□□□□□ -0.77
SHB17	YKR043C	SRP72	P38688	640 aa	Known RBP	10.24	□□□□□ -0.77
SHB17	YKR043C	MEF2	P39677	819 aa		10.24	□□□□□ -0.77
SHB17	YKR043C	ALA1	P40825	983 aa	Known RBP	10.24	□□□□□ -0.77
SHB17	YKR043C	PXA1	P41909	870 aa		10.24	□□□□□ -0.77
SHB17	YKR043C	FRE4	P53746	719 aa		10.24	□□□□□ -0.77
SHB17	YKR043C	PET117	Q02771	107 aa		10.24	□□□□□ -0.77
SHB17	YKR043C	ADY3	Q07732	790 aa		10.24	□□□□□ -0.77
SHB17	YKR043C	TGL5	Q12043	749 aa		10.24	□□□□□ -0.77
SHB17	YKR043C	RMD5	Q12508	421 aa		10.24	□□□□□ -0.77
SHB17	YKR043C	YEL077C	Q3E7X8	1277 aa		10.24	□□□□□ -0.77

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