RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeast

Gene RPN10, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN10	YHR200W	YHI9	P38765	294 aa		13.98	□□□□□ -0.17
RPN10	YHR200W	YHR131C	P38835	850 aa		13.98	□□□□□ -0.17
RPN10	YHR200W	TFG1	P41895	735 aa	Predicted RBP	13.98	□□□□□ -0.17
RPN10	YHR200W	FAR3	P46671	204 aa		13.98	□□□□□ -0.17
RPN10	YHR200W	ARC1	P46672	376 aa	Known RBP	13.98	□□□□□ -0.17
RPN10	YHR200W	AEP1	P32493	518 aa		13.97	□□□□□ -0.17
RPN10	YHR200W	NIP1	P32497	812 aa	Known RBP	13.97	□□□□□ -0.17
RPN10	YHR200W	IMP3	P32899	183 aa	Predicted RBP	13.97	□□□□□ -0.17
RPN10	YHR200W	GYP8	P43570	497 aa		13.97	□□□□□ -0.17
RPN10	YHR200W	CCT8	P47079	568 aa	Known RBP	13.97	□□□□□ -0.17
RPN10	YHR200W	AMA1	P50082	593 aa		13.97	□□□□□ -0.17
RPN10	YHR200W	PAN2	P53010	1115 aa	Predicted RBP	13.97	□□□□□ -0.17
RPN10	YHR200W	IMP4	P53941	290 aa	Known RBP	13.97	□□□□□ -0.17
RPN10	YHR200W	ORC3	P54790	616 aa		13.97	□□□□□ -0.17
RPN10	YHR200W	HPT1	Q04178	221 aa	Known RBP	13.97	□□□□□ -0.17
RPN10	YHR200W	SYT1	Q06836	1226 aa		13.97	□□□□□ -0.17
RPN10	YHR200W	RPS9A	O13516	197 aa	Known RBP	13.96	□□□□□ -0.17
RPN10	YHR200W	REV1	P12689	985 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	CLB1	P24868	471 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	GCD11	P32481	527 aa	Known RBP	13.96	□□□□□ -0.17
RPN10	YHR200W	GDA1	P32621	518 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	POL12	P38121	705 aa	Predicted RBP	13.96	□□□□□ -0.17
RPN10	YHR200W	HSM3	P38348	480 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	YHR182W	P38870	785 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	SEO1	P39709	593 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	MRX1	P40050	688 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	TEL2	P53038	688 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	AIM14	P53109	570 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	BUD32	P53323	261 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	IPI3	P53877	555 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	RPL34A	P87262	121 aa	Predicted RBP	13.96	□□□□□ -0.17
RPN10	YHR200W	REG1	Q00816	1014 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	TFB2	Q02939	513 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	VPS16	Q03308	798 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	YPR114W	Q06107	315 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	FLC1	Q08967	793 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	YLR046C	Q12253	270 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	PDH1	Q12428	516 aa	Known RBP	13.96	□□□□□ -0.17
RPN10	YHR200W	YEL077C	Q3E7X8	1277 aa		13.96	□□□□□ -0.17
RPN10	YHR200W	RBK1	P25332	333 aa		13.95	□□□□□ -0.18
RPN10	YHR200W	GEX1	P25596	615 aa		13.95	□□□□□ -0.18
RPN10	YHR200W	GEX2	P36173	615 aa		13.95	□□□□□ -0.18
RPN10	YHR200W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	13.95	□□□□□ -0.18	not detected
RPN10	YHR200W	YBR062C	P38239	180 aa		13.95	□□□□□ -0.18
RPN10	YHR200W	MNN1	P39106	762 aa		13.95	□□□□□ -0.18
RPN10	YHR200W	OAF1	P39720	1047 aa	Predicted RBP	13.95	□□□□□ -0.18
RPN10	YHR200W	AIM23	P47015	356 aa		13.95	□□□□□ -0.18
RPN10	YHR200W	SAP4	P53036	818 aa		13.95	□□□□□ -0.18
RPN10	YHR200W	YNR065C	P53751	1116 aa		13.95	□□□□□ -0.18
RPN10	YHR200W	YMR209C	Q03648	457 aa		13.95	□□□□□ -0.18
RPN10	YHR200W	TMN2	Q04562	672 aa		13.95	□□□□□ -0.18
RPN10	YHR200W	NOB1	Q08444	459 aa	Known RBP	13.95	□□□□□ -0.18
RPN10	YHR200W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	13.94	□□□□□ -0.18	not detected
RPN10	YHR200W	SIR1	P21691	654 aa		13.94	□□□□□ -0.18
RPN10	YHR200W	RAM1	P22007	431 aa		13.94	□□□□□ -0.18
RPN10	YHR200W	SEC14	P24280	304 aa	Known RBP	13.94	□□□□□ -0.18
RPN10	YHR200W	MNE1	P24720	663 aa		13.94	□□□□□ -0.18
RPN10	YHR200W	RPC19	P28000	142 aa	Known RBP	13.94	□□□□□ -0.18
RPN10	YHR200W	SLX8	P40072	274 aa		13.94	□□□□□ -0.18
RPN10	YHR200W	YJR061W	P40355	935 aa		13.94	□□□□□ -0.18
RPN10	YHR200W	PFK26	P40433	827 aa	Known RBP	13.94	□□□□□ -0.18
RPN10	YHR200W	HOS4	P40480	1083 aa		13.94	□□□□□ -0.18
RPN10	YHR200W	CHS6	P40955	746 aa		13.94	□□□□□ -0.18
RPN10	YHR200W	UBX4	P54730	416 aa		13.94	□□□□□ -0.18
RPN10	YHR200W	MCP2	Q06567	569 aa		13.94	□□□□□ -0.18
RPN10	YHR200W	KIN3	P22209	435 aa		13.93	□□□□□ -0.18
RPN10	YHR200W	BEM1	P29366	551 aa		13.93	□□□□□ -0.18
RPN10	YHR200W	PXA2	P34230	853 aa		13.93	□□□□□ -0.18
RPN10	YHR200W	PHO89	P38361	574 aa		13.93	□□□□□ -0.18
RPN10	YHR200W	DUN1	P39009	513 aa		13.93	□□□□□ -0.18
RPN10	YHR200W	HAT2	P39984	401 aa		13.93	□□□□□ -0.18
RPN10	YHR200W	DOT6	P40059	670 aa	Known RBP	13.93	□□□□□ -0.18
RPN10	YHR200W	PYK2	P52489	506 aa	Known RBP	13.93	□□□□□ -0.18
RPN10	YHR200W	FLC3	P53121	802 aa		13.93	□□□□□ -0.18
RPN10	YHR200W	PRM1	P53835	661 aa		13.93	□□□□□ -0.18
RPN10	YHR200W	TGL5	Q12043	749 aa		13.93	□□□□□ -0.18
RPN10	YHR200W	HSF1	P10961	833 aa		13.92	□□□□□ -0.18
RPN10	YHR200W	RNA1	P11745	407 aa	Known RBP	13.92	□□□□□ -0.18
RPN10	YHR200W	NSP1	P14907	823 aa	Known RBP	13.92	□□□□□ -0.18
RPN10	YHR200W	PMA2	P19657	947 aa		13.92	□□□□□ -0.18
RPN10	YHR200W	SPC105	P53148	917 aa		13.92	□□□□□ -0.18
RPN10	YHR200W	NHP10	Q03435	203 aa		13.92	□□□□□ -0.18
RPN10	YHR200W	PML39	Q03760	334 aa		13.92	□□□□□ -0.18
RPN10	YHR200W	LCB5	Q06147	687 aa	Known RBP	13.92	□□□□□ -0.18
RPN10	YHR200W	NUT2	Q06213	157 aa		13.92	□□□□□ -0.18
RPN10	YHR200W	FRT1	Q99332	602 aa		13.92	□□□□□ -0.18
RPN10	YHR200W	RPB4	P20433	221 aa	Predicted RBP	13.91	□□□□□ -0.18
RPN10	YHR200W	MF(ALPHA)2	P32435	120 aa		13.91	□□□□□ -0.18
RPN10	YHR200W	STB6	P36085	766 aa		13.91	□□□□□ -0.18
RPN10	YHR200W	RIM2	P38127	377 aa		13.91	□□□□□ -0.18
RPN10	YHR200W	SUB1	P54000	292 aa	Known RBP	13.91	□□□□□ -0.18
RPN10	YHR200W	ADE12	P80210	433 aa	Known RBP	13.91	□□□□□ -0.18
RPN10	YHR200W	PIR1	Q03178	341 aa		13.91	□□□□□ -0.18
RPN10	YHR200W	SGO1	Q08490	590 aa		13.91	□□□□□ -0.18
RPN10	YHR200W	YMR030W-A	Q3E760	96 aa		13.91	□□□□□ -0.18
RPN10	YHR200W	YPT6	Q99260	215 aa		13.91	□□□□□ -0.18
RPN10	YHR200W	ABF1	P14164	731 aa		13.9	□□□□□ -0.18
RPN10	YHR200W	TOA1	P32773	286 aa		13.9	□□□□□ -0.18
RPN10	YHR200W	LDB7	P38210	180 aa		13.9	□□□□□ -0.18
RPN10	YHR200W	NEM1	P38757	446 aa		13.9	□□□□□ -0.18

Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms