RNA–Protein interactions for RNA: YHR026W

VMA16, Transcript of Subunit c'' of the vacuolar ATPase, yeastyeast

Gene VMA16, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA16YHR026W SET5P38890 526 aaKnown RBP5.75□□□□□ -1.49
VMA16YHR026W PXA1P41909 870 aa5.75□□□□□ -1.49
VMA16YHR026W MRS2Q01926 470 aa5.75□□□□□ -1.49
VMA16YHR026W TOF2Q02208 771 aa5.75□□□□□ -1.49
VMA16YHR026W YMR018WQ04364 514 aa5.75□□□□□ -1.49
VMA16YHR026W YMR114CQ04471 368 aaKnown RBP5.75□□□□□ -1.49
VMA16YHR026W RUD3Q12234 484 aaKnown RBP5.75□□□□□ -1.49
VMA16YHR026W LPX1Q12405 387 aaKnown RBP5.75□□□□□ -1.49
VMA16YHR026W GFA1P14742 717 aaKnown RBP5.74□□□□□ -1.49
VMA16YHR026W PAP1P29468 568 aaKnown RBP5.74□□□□□ -1.49
VMA16YHR026W UBC6P33296 250 aaPredicted RBP5.74□□□□□ -1.49
VMA16YHR026W YEL1P34225 687 aa5.74□□□□□ -1.49
VMA16YHR026W KDX1P36005 433 aa5.74□□□□□ -1.49
VMA16YHR026W AGP2P38090 596 aa5.74□□□□□ -1.49
VMA16YHR026W YBR184WP38299 523 aa5.74□□□□□ -1.49
VMA16YHR026W ATG12P38316 186 aa5.74□□□□□ -1.49
VMA16YHR026W RCK2P38623 610 aa5.74□□□□□ -1.49
VMA16YHR026W SPC72P39723 622 aa5.74□□□□□ -1.49
VMA16YHR026W LCB2P40970 561 aa5.74□□□□□ -1.49
VMA16YHR026W ERG10P41338 398 aaKnown RBP5.74□□□□□ -1.49
VMA16YHR026W MIC19P43594 170 aa5.74□□□□□ -1.49
VMA16YHR026W CTK3P46963 296 aaPredicted RBP5.74□□□□□ -1.49
VMA16YHR026W RPC17P47076 161 aa5.74□□□□□ -1.49
VMA16YHR026W JJJ1P53863 590 aa5.74□□□□□ -1.49
VMA16YHR026W OMS1Q06668 471 aa5.74□□□□□ -1.49
VMA16YHR026W SIL1Q08199 421 aa5.74□□□□□ -1.49
VMA16YHR026W APL5Q08951 932 aaKnown RBP5.74□□□□□ -1.49
VMA16YHR026W ZRT2Q12436 422 aa5.74□□□□□ -1.49
VMA16YHR026W MSF1P08425 469 aa5.73□□□□□ -1.49
VMA16YHR026W SPS1P08458 490 aa5.73□□□□□ -1.49
VMA16YHR026W ERG11P10614 530 aa5.73□□□□□ -1.49
VMA16YHR026W LRG1P35688 1017 aa5.73□□□□□ -1.49
VMA16YHR026W YKL023WP36103 277 aaKnown RBP5.73□□□□□ -1.49
VMA16YHR026W SPP381P38282 291 aaPredicted RBP5.73□□□□□ -1.49
VMA16YHR026W YBR225WP38321 900 aa5.73□□□□□ -1.49
VMA16YHR026W BAT1P38891 393 aaKnown RBP5.73□□□□□ -1.49
VMA16YHR026W VPS41P38959 992 aa5.73□□□□□ -1.49
VMA16YHR026W HSH155P49955 971 aaKnown RBP5.73□□□□□ -1.49
VMA16YHR026W TDA7P53882 636 aaPredicted RBP5.73□□□□□ -1.49
VMA16YHR026W TIM8P57744 87 aa5.73□□□□□ -1.49
VMA16YHR026W ECI1Q05871 280 aa5.73□□□□□ -1.49
VMA16YHR026W RTK1Q12100 620 aaPredicted RBP5.73□□□□□ -1.49
VMA16YHR026W CCR4P31384 837 aaKnown RBP5.72□□□□□ -1.49
VMA16YHR026W DEP1P31385 405 aa5.72□□□□□ -1.49
VMA16YHR026W LAS1P36146 502 aaPredicted RBP5.72□□□□□ -1.49
VMA16YHR026W SAK1P38990 1142 aa5.72□□□□□ -1.49
VMA16YHR026W SAH1P39954 449 aaKnown RBP5.72□□□□□ -1.49
VMA16YHR026W AVT2P39981 480 aa5.72□□□□□ -1.49
VMA16YHR026W NPP2P39997 493 aa5.72□□□□□ -1.49
VMA16YHR026W DUG1P43616 481 aaKnown RBP5.72□□□□□ -1.49
VMA16YHR026W YJR039WP47107 1121 aa5.72□□□□□ -1.49
VMA16YHR026W YGL036WP53185 909 aaPredicted RBP5.72□□□□□ -1.49
VMA16YHR026W SHE9Q04172 456 aa5.72□□□□□ -1.49
VMA16YHR026W URH1Q04179 340 aa5.72□□□□□ -1.49
VMA16YHR026W ERV41Q04651 352 aa5.72□□□□□ -1.49
VMA16YHR026W STE23Q06010 1027 aa5.72□□□□□ -1.49
VMA16YHR026W ACM1Q08981 209 aa5.72□□□□□ -1.49
VMA16YHR026W CDC33P07260 213 aaKnown RBP5.71□□□□□ -1.5
VMA16YHR026W CHS1P08004 1131 aa5.71□□□□□ -1.5
VMA16YHR026W MUD1P32605 298 aaKnown RBP5.71□□□□□ -1.5
VMA16YHR026W FRE1P32791 686 aa5.71□□□□□ -1.5
VMA16YHR026W WSC4P38739 605 aa5.71□□□□□ -1.5
VMA16YHR026W PPE1P38796 400 aa5.71□□□□□ -1.5
VMA16YHR026W TAT2P38967 592 aa5.71□□□□□ -1.5
VMA16YHR026W UME6P39001 836 aa5.71□□□□□ -1.5
VMA16YHR026W HEM14P40012 539 aa5.71□□□□□ -1.5
VMA16YHR026W YJR061WP40355 935 aa5.71□□□□□ -1.5
VMA16YHR026W YPS6P40583 537 aa5.71□□□□□ -1.5
VMA16YHR026W DAS1P47005 663 aa5.71□□□□□ -1.5
VMA16YHR026W NUP84P52891 726 aa5.71□□□□□ -1.5
VMA16YHR026W RPL22BP56628 122 aaKnown RBP5.71□□□□□ -1.5
VMA16YHR026W MTD1Q02046 320 aaKnown RBP5.71□□□□□ -1.5
VMA16YHR026W YPL014WQ02606 381 aa5.71□□□□□ -1.5
VMA16YHR026W MUB1Q03162 620 aa5.71□□□□□ -1.5
VMA16YHR026W CLU1Q03690 1277 aaKnown RBP5.71□□□□□ -1.5
VMA16YHR026W ECM22Q05958 814 aaPredicted RBP5.71□□□□□ -1.5
VMA16YHR026W YPR027CQ12079 277 aa5.71□□□□□ -1.5
VMA16YHR026W YLR462WO13556 202 aa5.7□□□□□ -1.5
VMA16YHR026W RAD1P06777 1100 aa5.7□□□□□ -1.5
VMA16YHR026W NAT1P12945 854 aaKnown RBP5.7□□□□□ -1.5
VMA16YHR026W CLB1P24868 471 aa5.7□□□□□ -1.5
VMA16YHR026W WBP1P33767 430 aaKnown RBP5.7□□□□□ -1.5
VMA16YHR026W MRP8P35719 219 aa5.7□□□□□ -1.5
VMA16YHR026W YKL050CP35736 922 aa5.7□□□□□ -1.5
VMA16YHR026W TRZ1P36159 838 aaPredicted RBP5.7□□□□□ -1.5
VMA16YHR026W YBR238CP38330 731 aaKnown RBP5.7□□□□□ -1.5
VMA16YHR026W HIS2P38635 335 aa5.7□□□□□ -1.5
VMA16YHR026W YHL049CP38722 271 aa5.7□□□□□ -1.5
VMA16YHR026W GEM1P39722 662 aa5.7□□□□□ -1.5
VMA16YHR026W YEL075CP39972 122 aa5.7□□□□□ -1.5
VMA16YHR026W YER189WP40104 122 aa5.7□□□□□ -1.5
VMA16YHR026W RAD26P40352 1085 aa5.7□□□□□ -1.5
VMA16YHR026W YFL064CP43540 174 aa5.7□□□□□ -1.5
VMA16YHR026W IML2P47031 731 aa5.7□□□□□ -1.5
VMA16YHR026W COQ6P53318 479 aa5.7□□□□□ -1.5
VMA16YHR026W YGR266WP53326 701 aa5.7□□□□□ -1.5
VMA16YHR026W NRD1P53617 575 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
VMA16YHR026W RPA49Q01080 415 aaPredicted RBP5.7□□□□□ -1.5
VMA16YHR026W NAN1Q02931 896 aaKnown RBP5.7□□□□□ -1.5
VMA16YHR026W MTG1Q03151 367 aaPredicted RBP5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms