RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W ARB1P40024 610 aaKnown RBP6.89□□□□□ -1.31
SNU71YGR013W SSU1P41930 458 aa6.89□□□□□ -1.31
SNU71YGR013W ROK1P45818 564 aaPredicted RBP6.89□□□□□ -1.31
SNU71YGR013W PRP43P53131 767 aaKnown RBP6.89□□□□□ -1.31
SNU71YGR013W YPL108WQ02872 168 aaPredicted RBP6.89□□□□□ -1.31
SNU71YGR013W NUS1Q12063 375 aa6.89□□□□□ -1.31
SNU71YGR013W HRP1Q99383 534 aaKnown RBP6.89□□□□□ -1.31
SNU71YGR013W POL4P25615 582 aa6.88□□□□□ -1.31
SNU71YGR013W RPN2P32565 945 aaKnown RBP6.88□□□□□ -1.31
SNU71YGR013W APE3P37302 537 aaKnown RBP6.88□□□□□ -1.31
SNU71YGR013W AKR1P39010 764 aa6.88□□□□□ -1.31
SNU71YGR013W GET2P40056 285 aa6.88□□□□□ -1.31
SNU71YGR013W MET28P40573 187 aa6.88□□□□□ -1.31
SNU71YGR013W ZIM17P42844 174 aa6.88□□□□□ -1.31
SNU71YGR013W OGG1P53397 376 aaPredicted RBP6.88□□□□□ -1.31
SNU71YGR013W SEC5P89102 971 aa6.88□□□□□ -1.31
SNU71YGR013W MAK10Q02197 733 aa6.88□□□□□ -1.31
SNU71YGR013W SRB8P25648 1427 aa6.88□□□□□ -1.31
SNU71YGR013W STE12P13574 688 aa6.87□□□□□ -1.31
SNU71YGR013W KTR3P38130 404 aaPredicted RBP6.87□□□□□ -1.31
SNU71YGR013W YJL055WP47044 245 aa6.87□□□□□ -1.31
SNU71YGR013W COS12P53053 380 aa6.87□□□□□ -1.31
SNU71YGR013W NCS2P53923 493 aaPredicted RBP6.87□□□□□ -1.31
SNU71YGR013W MUB1Q03162 620 aa6.87□□□□□ -1.31
SNU71YGR013W TPO1Q07824 586 aa6.87□□□□□ -1.31
SNU71YGR013W SWM1Q12379 170 aa6.87□□□□□ -1.31
SNU71YGR013W YRF1-4O13559 1382 aa6.87□□□□□ -1.31
SNU71YGR013W POT1P27796 417 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
SNU71YGR013W MGM1P32266 881 aa6.87□□□□□ -1.31
SNU71YGR013W GEX2P36173 615 aa6.87□□□□□ -1.31
SNU71YGR013W SLZ1P40167 298 aa6.87□□□□□ -1.31
SNU71YGR013W THI6P41835 540 aa6.87□□□□□ -1.31
SNU71YGR013W ASE1P50275 885 aa6.87□□□□□ -1.31
SNU71YGR013W LCL3P53153 274 aa6.87□□□□□ -1.31
SNU71YGR013W YNL058CP53947 316 aa6.87□□□□□ -1.31
SNU71YGR013W YPL107WQ02873 248 aa6.87□□□□□ -1.31
SNU71YGR013W RIM20Q12033 661 aa6.87□□□□□ -1.31
SNU71YGR013W SPE4Q12455 300 aa6.87□□□□□ -1.31
SNU71YGR013W PNO1Q99216 274 aaKnown RBP6.87□□□□□ -1.31
SNU71YGR013W ISN1Q99312 450 aa6.87□□□□□ -1.31
SNU71YGR013W HAP1P0CE41 1502 aa6.86□□□□□ -1.31
SNU71YGR013W CET1O13297 549 aaPredicted RBP6.86□□□□□ -1.31
SNU71YGR013W GAL10P04397 699 aa6.86□□□□□ -1.31
SNU71YGR013W CLB3P24870 427 aa6.86□□□□□ -1.31
SNU71YGR013W URA7P28274 579 aaKnown RBP6.86□□□□□ -1.31
SNU71YGR013W GCD7P32502 381 aaPredicted RBP6.86□□□□□ -1.31
SNU71YGR013W PGM1P33401 570 aaKnown RBP6.86□□□□□ -1.31
SNU71YGR013W REG2P38232 338 aa6.86□□□□□ -1.31
SNU71YGR013W TOS1P38288 455 aa6.86□□□□□ -1.31
SNU71YGR013W PFK26P40433 827 aaKnown RBP6.86□□□□□ -1.31
SNU71YGR013W TEX1P53851 422 aaKnown RBP6.86□□□□□ -1.31
SNU71YGR013W SSY1Q03770 852 aa6.86□□□□□ -1.31
SNU71YGR013W RSF1Q05043 376 aa6.86□□□□□ -1.31
SNU71YGR013W DCG1P32460 244 aa6.85□□□□□ -1.31
SNU71YGR013W UBP11P36026 717 aa6.85□□□□□ -1.31
SNU71YGR013W FTH1P38310 465 aa6.85□□□□□ -1.31
SNU71YGR013W SLU7Q02775 382 aaKnown RBP6.85□□□□□ -1.31
SNU71YGR013W CLU1Q03690 1277 aaKnown RBP6.85□□□□□ -1.31
SNU71YGR013W THI22Q06490 572 aa6.85□□□□□ -1.31
SNU71YGR013W LYS21Q12122 440 aaKnown RBP6.85□□□□□ -1.31
SNU71YGR013W ERG27Q12452 347 aaKnown RBP6.85□□□□□ -1.31
SNU71YGR013W SEC12P11655 471 aa6.85□□□□□ -1.31
SNU71YGR013W MAL33P38157 468 aa6.85□□□□□ -1.31
SNU71YGR013W BUD27P43573 796 aaKnown RBP RIP-Chip data6.85□□□□□ -1.31not detected
SNU71YGR013W OCA1P50946 238 aaPredicted RBP6.85□□□□□ -1.31
SNU71YGR013W FDC1Q03034 503 aa6.85□□□□□ -1.31
SNU71YGR013W FMP45Q07651 309 aa6.85□□□□□ -1.31
SNU71YGR013W CYC1P00044 109 aaPredicted RBP6.84□□□□□ -1.31
SNU71YGR013W MDH1P17505 334 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
SNU71YGR013W VPS33P20795 691 aa6.84□□□□□ -1.31
SNU71YGR013W YCR051WP25631 222 aa6.84□□□□□ -1.31
SNU71YGR013W LAS1P36146 502 aaPredicted RBP6.84□□□□□ -1.31
SNU71YGR013W DOT5P40553 215 aa6.84□□□□□ -1.31
SNU71YGR013W LYS4P49367 693 aaPredicted RBP6.84□□□□□ -1.31
SNU71YGR013W ARR3Q06598 404 aa6.84□□□□□ -1.31
SNU71YGR013W YJR112W-AQ3E743 109 aa6.84□□□□□ -1.31
SNU71YGR013W CAF20P12962 161 aaKnown RBP6.83□□□□□ -1.32
SNU71YGR013W SEC15P22224 910 aa6.83□□□□□ -1.32
SNU71YGR013W AUR1P36107 401 aaPredicted RBP6.83□□□□□ -1.32
SNU71YGR013W LRO1P40345 661 aa6.83□□□□□ -1.32
SNU71YGR013W EFM4P40516 257 aa6.83□□□□□ -1.32
SNU71YGR013W SGN1P40561 250 aaKnown RBP RIP-Chip data6.83□□□□□ -1.32not detected
SNU71YGR013W SKP2P42843 763 aa6.83□□□□□ -1.32
SNU71YGR013W TCB2P48231 1178 aa6.83□□□□□ -1.32
SNU71YGR013W ARI1P53111 347 aaKnown RBP6.83□□□□□ -1.32
SNU71YGR013W MRPS35P53292 345 aa6.83□□□□□ -1.32
SNU71YGR013W GRX3Q03835 250 aa6.83□□□□□ -1.32
SNU71YGR013W YEH1Q07804 573 aa6.83□□□□□ -1.32
SNU71YGR013W GPM3Q12326 303 aa6.83□□□□□ -1.32
SNU71YGR013W SKS1Q12505 502 aa6.83□□□□□ -1.32
SNU71YGR013W YOR019WQ99248 730 aa6.83□□□□□ -1.32
SNU71YGR013W SWC3P31376 625 aa6.83□□□□□ -1.32
SNU71YGR013W VID24P38263 362 aa6.83□□□□□ -1.32
SNU71YGR013W COS111P38308 924 aa6.83□□□□□ -1.32
SNU71YGR013W BUD16P39988 312 aa6.83□□□□□ -1.32
SNU71YGR013W MET12P46151 657 aa6.83□□□□□ -1.32
SNU71YGR013W GCV2P49095 1034 aa6.83□□□□□ -1.32
SNU71YGR013W NCS6P53088 359 aa6.83□□□□□ -1.32
SNU71YGR013W ARX1Q03862 593 aaKnown RBP6.83□□□□□ -1.32
SNU71YGR013W GAD1Q04792 585 aa6.83□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 48.6 ms