RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W FUS3P16892 353 aaKnown RBP5.46□□□□□ -1.54
PDE1YGL248W EST1P17214 699 aaPredicted RBP5.46□□□□□ -1.54
PDE1YGL248W CDC42P19073 191 aa5.46□□□□□ -1.54
PDE1YGL248W RPI1P23250 407 aaKnown RBP5.46□□□□□ -1.54
PDE1YGL248W EMC1P25574 760 aa5.46□□□□□ -1.54
PDE1YGL248W PAP1P29468 568 aaKnown RBP5.46□□□□□ -1.54
PDE1YGL248W COT1P32798 439 aa5.46□□□□□ -1.54
PDE1YGL248W PTR2P32901 601 aa5.46□□□□□ -1.54
PDE1YGL248W WSS1P38838 269 aa5.46□□□□□ -1.54
PDE1YGL248W REV7P38927 245 aa5.46□□□□□ -1.54
PDE1YGL248W STN1P38960 494 aa5.46□□□□□ -1.54
PDE1YGL248W STT3P39007 718 aaKnown RBP5.46□□□□□ -1.54
PDE1YGL248W EAF5P39995 279 aa5.46□□□□□ -1.54
PDE1YGL248W UBC9P50623 157 aaPredicted RBP5.46□□□□□ -1.54
PDE1YGL248W CUE3P53137 624 aaKnown RBP5.46□□□□□ -1.54
PDE1YGL248W DCP2P53550 970 aaKnown RBP5.46□□□□□ -1.54
PDE1YGL248W ATC1Q04005 294 aa5.46□□□□□ -1.54
PDE1YGL248W BOP2Q06150 570 aa5.46□□□□□ -1.54
PDE1YGL248W ARR2Q06597 130 aa5.46□□□□□ -1.54
PDE1YGL248W VAC14Q06708 880 aa5.46□□□□□ -1.54
PDE1YGL248W YOR389WQ08912 624 aa5.46□□□□□ -1.54
PDE1YGL248W TCO89Q08921 799 aa5.46□□□□□ -1.54
PDE1YGL248W RIM20Q12033 661 aa5.46□□□□□ -1.54
PDE1YGL248W GNT1Q12096 491 aa5.46□□□□□ -1.54
PDE1YGL248W CTF3Q12748 733 aa5.46□□□□□ -1.54
PDE1YGL248W LAM4P38800 1345 aa5.46□□□□□ -1.54
PDE1YGL248W RPS9AO13516 197 aaKnown RBP5.45□□□□□ -1.54
PDE1YGL248W RPS9BP05755 195 aaKnown RBP5.45□□□□□ -1.54
PDE1YGL248W STE12P13574 688 aa5.45□□□□□ -1.54
PDE1YGL248W SIR1P21691 654 aa5.45□□□□□ -1.54
PDE1YGL248W HIR2P32480 875 aa5.45□□□□□ -1.54
PDE1YGL248W FRD1P32614 470 aaKnown RBP5.45□□□□□ -1.54
PDE1YGL248W ADD66P36040 267 aa5.45□□□□□ -1.54
PDE1YGL248W UGA2P38067 497 aa5.45□□□□□ -1.54
PDE1YGL248W RGD1P38339 666 aa5.45□□□□□ -1.54
PDE1YGL248W LIN1P38852 340 aaPredicted RBP5.45□□□□□ -1.54
PDE1YGL248W MET18P40469 1032 aa5.45□□□□□ -1.54
PDE1YGL248W CHS6P40955 746 aa5.45□□□□□ -1.54
PDE1YGL248W YRB1P41920 201 aaKnown RBP5.45□□□□□ -1.54
PDE1YGL248W PSP1P50896 841 aaKnown RBP5.45□□□□□ -1.54
PDE1YGL248W GPD1Q00055 391 aaKnown RBP5.45□□□□□ -1.54
PDE1YGL248W YSA1Q01976 231 aa5.45□□□□□ -1.54
PDE1YGL248W MRPS17Q03246 237 aaPredicted RBP5.45□□□□□ -1.54
PDE1YGL248W MRPL1Q04599 285 aa5.45□□□□□ -1.54
PDE1YGL248W CDA2Q06703 312 aa5.45□□□□□ -1.54
PDE1YGL248W HBT1Q07653 1046 aaKnown RBP5.45□□□□□ -1.54
PDE1YGL248W NGL1Q08213 363 aaKnown RBP5.45□□□□□ -1.54
PDE1YGL248W BRX1Q08235 291 aaKnown RBP5.45□□□□□ -1.54
PDE1YGL248W TRE1Q08919 783 aa5.45□□□□□ -1.54
PDE1YGL248W SWT1Q12104 458 aa5.45□□□□□ -1.54
PDE1YGL248W GCD2P12754 651 aaPredicted RBP5.44□□□□□ -1.54
PDE1YGL248W CBS1P14066 229 aa5.44□□□□□ -1.54
PDE1YGL248W ACO1P19414 778 aaKnown RBP RIP-Chip data5.44□□□□□ -1.54not detected
PDE1YGL248W PMA2P19657 947 aa5.44□□□□□ -1.54
PDE1YGL248W NFS1P25374 497 aa5.44□□□□□ -1.54
PDE1YGL248W DGR2P32330 852 aa5.44□□□□□ -1.54
PDE1YGL248W GLG1P36143 616 aa5.44□□□□□ -1.54
PDE1YGL248W MSR1P38714 643 aa5.44□□□□□ -1.54
PDE1YGL248W MNL1P38888 796 aa5.44□□□□□ -1.54
PDE1YGL248W PSD1P39006 500 aa5.44□□□□□ -1.54
PDE1YGL248W PFK26P40433 827 aaKnown RBP5.44□□□□□ -1.54
PDE1YGL248W ALY2P47029 1046 aa5.44□□□□□ -1.54
PDE1YGL248W YDL183CP48569 320 aa5.44□□□□□ -1.54
PDE1YGL248W ALT2P52892 507 aa5.44□□□□□ -1.54
PDE1YGL248W MNT4P53745 580 aa5.44□□□□□ -1.54
PDE1YGL248W PGA2P53903 129 aa5.44□□□□□ -1.54
PDE1YGL248W ORC4P54791 529 aa5.44□□□□□ -1.54
PDE1YGL248W MTD1Q02046 320 aaKnown RBP5.44□□□□□ -1.54
PDE1YGL248W SSY1Q03770 852 aa5.44□□□□□ -1.54
PDE1YGL248W SSL1Q04673 461 aaPredicted RBP5.44□□□□□ -1.54
PDE1YGL248W NNT1Q05874 261 aa5.44□□□□□ -1.54
PDE1YGL248W ENV7Q12003 364 aa5.44□□□□□ -1.54
PDE1YGL248W YVC1Q12324 675 aa5.44□□□□□ -1.54
PDE1YGL248W RPL1AP0CX43 217 aaKnown RBP5.43□□□□□ -1.54
PDE1YGL248W RPL1BP0CX44 217 aaKnown RBP5.43□□□□□ -1.54
PDE1YGL248W UNG1P12887 359 aa5.43□□□□□ -1.54
PDE1YGL248W TAL1P15019 335 aaKnown RBP5.43□□□□□ -1.54
PDE1YGL248W YCK1P23291 538 aa5.43□□□□□ -1.54
PDE1YGL248W BUD5P25300 642 aaPredicted RBP5.43□□□□□ -1.54
PDE1YGL248W YCR015CP25616 317 aa5.43□□□□□ -1.54
PDE1YGL248W CDC15P27636 974 aa5.43□□□□□ -1.54
PDE1YGL248W ERV1P27882 189 aa5.43□□□□□ -1.54
PDE1YGL248W CAP1P28495 268 aaKnown RBP5.43□□□□□ -1.54
PDE1YGL248W EFT1P32324 842 aaKnown RBP5.43□□□□□ -1.54
PDE1YGL248W RPC82P32349 654 aa5.43□□□□□ -1.54
PDE1YGL248W SUA5P32579 426 aa5.43□□□□□ -1.54
PDE1YGL248W LTV1P34078 463 aa5.43□□□□□ -1.54
PDE1YGL248W TSA1P34760 196 aaKnown RBP5.43□□□□□ -1.54
PDE1YGL248W YKR015CP36111 568 aa5.43□□□□□ -1.54
PDE1YGL248W TOM71P38825 639 aaKnown RBP5.43□□□□□ -1.54
PDE1YGL248W MND2P40577 368 aa5.43□□□□□ -1.54
PDE1YGL248W IRC5P43610 853 aa5.43□□□□□ -1.54
PDE1YGL248W YGR111WP53265 400 aa5.43□□□□□ -1.54
PDE1YGL248W MPP6P53725 186 aaPredicted RBP5.43□□□□□ -1.54
PDE1YGL248W AQR1P53943 586 aa5.43□□□□□ -1.54
PDE1YGL248W ATG26Q06321 1198 aa5.43□□□□□ -1.54
PDE1YGL248W LDB17Q12342 491 aa5.43□□□□□ -1.54
PDE1YGL248W MED4Q12343 284 aa5.43□□□□□ -1.54
PDE1YGL248W AFI1Q99222 893 aa5.43□□□□□ -1.54
PDE1YGL248W STE2D6VTK4 431 aa5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms