RNA–Protein interactions for RNA: YGL190C

CDC55, Transcript of Non-essential regulatory subunit B of protein phosphatase 2A (PP2A), yeast

Gene CDC55, Length 1,581 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC55	YGL190C	SEC27	P41811	889 aa	Known RBP	3.12	□□□□□ -1.91
CDC55	YGL190C	SMC3	P47037	1230 aa		3.12	□□□□□ -1.91
CDC55	YGL190C	MRPL13	Q02204	264 aa		3.12	□□□□□ -1.91
CDC55	YGL190C	ERV41	Q04651	352 aa		3.12	□□□□□ -1.91
CDC55	YGL190C	YPR172W	Q06608	200 aa		3.12	□□□□□ -1.91
CDC55	YGL190C	RAD34	Q06665	692 aa		3.12	□□□□□ -1.91
CDC55	YGL190C	PSR1	Q07800	427 aa		3.12	□□□□□ -1.91
CDC55	YGL190C	LCB4	Q12246	624 aa		3.12	□□□□□ -1.91
CDC55	YGL190C	DBP10	Q12389	995 aa	Known RBP	3.12	□□□□□ -1.91
CDC55	YGL190C	SNU66	Q12420	587 aa	Predicted RBP	3.12	□□□□□ -1.91
CDC55	YGL190C	VAS1	P07806	1104 aa	Known RBP	3.12	□□□□□ -1.91
CDC55	YGL190C	SRP54	P20424	541 aa	Known RBP	3.12	□□□□□ -1.91
CDC55	YGL190C	PRE2	P30656	287 aa	Known RBP	3.12	□□□□□ -1.91
CDC55	YGL190C	TFC3	P34111	1160 aa		3.12	□□□□□ -1.91
CDC55	YGL190C	YMR124W	P39523	943 aa	Known RBP	3.12	□□□□□ -1.91
CDC55	YGL190C	YEL068C	P39977	110 aa		3.12	□□□□□ -1.91
CDC55	YGL190C	VTC2	P43585	828 aa		3.12	□□□□□ -1.91
CDC55	YGL190C	IRC8	P47046	822 aa		3.12	□□□□□ -1.91
CDC55	YGL190C	PUS4	P48567	403 aa	Known RBP	3.12	□□□□□ -1.91
CDC55	YGL190C	SCS3	P53012	380 aa		3.12	□□□□□ -1.91
CDC55	YGL190C	YPL071C	Q02864	156 aa		3.12	□□□□□ -1.91
CDC55	YGL190C	RTC1	Q08281	1341 aa		3.12	□□□□□ -1.91
CDC55	YGL190C	NCP1	P16603	691 aa	Known RBP	3.11	□□□□□ -1.91
CDC55	YGL190C	MCM3	P24279	971 aa	Known RBP	3.11	□□□□□ -1.91
CDC55	YGL190C	YCL049C	P25577	312 aa		3.11	□□□□□ -1.91
CDC55	YGL190C	YCR061W	P25639	631 aa		3.11	□□□□□ -1.91
CDC55	YGL190C	ASK1	P35734	292 aa		3.11	□□□□□ -1.91
CDC55	YGL190C	AXL2	P38928	823 aa		3.11	□□□□□ -1.91
CDC55	YGL190C	PUG1	P40100	303 aa		3.11	□□□□□ -1.91
CDC55	YGL190C	PSF2	P40359	213 aa		3.11	□□□□□ -1.91
CDC55	YGL190C	YIL024C	P40543	189 aa		3.11	□□□□□ -1.91
CDC55	YGL190C	IMA5	P40884	581 aa		3.11	□□□□□ -1.91
CDC55	YGL190C	SCW4	P53334	386 aa	Known RBP	3.11	□□□□□ -1.91
CDC55	YGL190C	COP1	P53622	1201 aa	Known RBP	3.11	□□□□□ -1.91
CDC55	YGL190C	CPR6	P53691	371 aa	Known RBP	3.11	□□□□□ -1.91
CDC55	YGL190C	UBP16	Q02863	499 aa		3.11	□□□□□ -1.91
CDC55	YGL190C	SDH5	Q08230	162 aa		3.11	□□□□□ -1.91
CDC55	YGL190C	YOR389W	Q08912	624 aa		3.11	□□□□□ -1.91
CDC55	YGL190C	HOS1	Q12214	470 aa		3.11	□□□□□ -1.91
CDC55	YGL190C	NOP58	Q12499	511 aa	Known RBP	3.11	□□□□□ -1.91
CDC55	YGL190C	STH1	P32597	1359 aa		3.11	□□□□□ -1.91
CDC55	YGL190C	CET1	O13297	549 aa	Predicted RBP	3.1	□□□□□ -1.91
CDC55	YGL190C	GAL4	P04386	881 aa		3.1	□□□□□ -1.91
CDC55	YGL190C	SNF1	P06782	633 aa	Known RBP	3.1	□□□□□ -1.91
CDC55	YGL190C	MTF2	P10849	440 aa		3.1	□□□□□ -1.91
CDC55	YGL190C	AAC3	P18238	307 aa		3.1	□□□□□ -1.91
CDC55	YGL190C	UBC1	P21734	215 aa	Known RBP	3.1	□□□□□ -1.91
CDC55	YGL190C	CLB4	P24871	460 aa		3.1	□□□□□ -1.91
CDC55	YGL190C	YUR1	P26725	428 aa		3.1	□□□□□ -1.91
CDC55	YGL190C	PAH1	P32567	862 aa		3.1	□□□□□ -1.91
CDC55	YGL190C	RPT3	P33298	428 aa	Known RBP	3.1	□□□□□ -1.91
CDC55	YGL190C	TAF5	P38129	798 aa		3.1	□□□□□ -1.91
CDC55	YGL190C	FTH1	P38310	465 aa		3.1	□□□□□ -1.91
CDC55	YGL190C	SSP120	P39931	234 aa	Known RBP	3.1	□□□□□ -1.91
CDC55	YGL190C	SAP1	P39955	897 aa	Known RBP	3.1	□□□□□ -1.91
CDC55	YGL190C	DPH1	P40487	425 aa	Known RBP	3.1	□□□□□ -1.91
CDC55	YGL190C	PCI8	P40512	444 aa		3.1	□□□□□ -1.91
CDC55	YGL190C	DSN1	P40568	576 aa		3.1	□□□□□ -1.91
CDC55	YGL190C	CIN1	P40987	1014 aa		3.1	□□□□□ -1.91
CDC55	YGL190C	EAF7	P53911	425 aa	Known RBP	3.1	□□□□□ -1.91
CDC55	YGL190C	TRS31	Q03337	283 aa		3.1	□□□□□ -1.91
CDC55	YGL190C	VID22	Q05934	901 aa		3.1	□□□□□ -1.91
CDC55	YGL190C	VIP1	Q06685	1146 aa	Known RBP	3.1	□□□□□ -1.91
CDC55	YGL190C	YDL242W	Q07746	117 aa		3.1	□□□□□ -1.91
CDC55	YGL190C	CHD1	P32657	1468 aa		3.09	□□□□□ -1.91
CDC55	YGL190C	MIS1	P09440	975 aa	Known RBP	3.09	□□□□□ -1.91
CDC55	YGL190C	MRP7	P12687	371 aa		3.09	□□□□□ -1.91
CDC55	YGL190C	POL3	P15436	1097 aa		3.09	□□□□□ -1.91
CDC55	YGL190C	GUK1	P15454	187 aa	Known RBP	3.09	□□□□□ -1.91
CDC55	YGL190C	YCP4	P25349	247 aa	Known RBP	3.09	□□□□□ -1.91
CDC55	YGL190C	KES1	P35844	434 aa	Known RBP	3.09	□□□□□ -1.91
CDC55	YGL190C	IFA38	P38286	347 aa		3.09	□□□□□ -1.91
CDC55	YGL190C	STT3	P39007	718 aa	Known RBP	3.09	□□□□□ -1.91
CDC55	YGL190C	ERV46	P39727	415 aa		3.09	□□□□□ -1.91
CDC55	YGL190C	NOP16	P40007	231 aa	Known RBP	3.09	□□□□□ -1.91
CDC55	YGL190C	UBP7	P40453	1071 aa		3.09	□□□□□ -1.91
CDC55	YGL190C	FAF1	P40546	346 aa	Predicted RBP	3.09	□□□□□ -1.91
CDC55	YGL190C	IRC7	P43623	340 aa		3.09	□□□□□ -1.91
CDC55	YGL190C	UPF3	P48412	387 aa	Known RBP	3.09	□□□□□ -1.91
CDC55	YGL190C	BNI5	P53890	448 aa	Known RBP	3.09	□□□□□ -1.91
CDC55	YGL190C	CBK1	P53894	756 aa		3.09	□□□□□ -1.91
CDC55	YGL190C	VTC3	Q02725	835 aa		3.09	□□□□□ -1.91
CDC55	YGL190C	SNU56	Q03782	492 aa	Known RBP	3.09	□□□□□ -1.91
CDC55	YGL190C	LSP1	Q12230	341 aa	Known RBP	3.09	□□□□□ -1.91
CDC55	YGL190C	HSP42	Q12329	375 aa		3.09	□□□□□ -1.91
CDC55	YGL190C	BI2	P03873	423 aa		3.08	□□□□□ -1.92
CDC55	YGL190C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
CDC55	YGL190C	OPI1	P21957	404 aa		3.08	□□□□□ -1.92
CDC55	YGL190C	SWI3	P32591	825 aa		3.08	□□□□□ -1.92
CDC55	YGL190C	PRS1	P32895	427 aa	Known RBP	3.08	□□□□□ -1.92
CDC55	YGL190C	NUP120	P35729	1037 aa		3.08	□□□□□ -1.92
CDC55	YGL190C	YBR138C	P38277	524 aa		3.08	□□□□□ -1.92
CDC55	YGL190C	MED8	P38304	223 aa		3.08	□□□□□ -1.92
CDC55	YGL190C	MTG2	P38860	518 aa		3.08	□□□□□ -1.92
CDC55	YGL190C	UME6	P39001	836 aa		3.08	□□□□□ -1.92
CDC55	YGL190C	JHD1	P40034	492 aa		3.08	□□□□□ -1.92
CDC55	YGL190C	MAM1	P40065	302 aa		3.08	□□□□□ -1.92
CDC55	YGL190C	POL31	P46957	487 aa		3.08	□□□□□ -1.92
CDC55	YGL190C	SGM1	P47166	707 aa		3.08	□□□□□ -1.92
CDC55	YGL190C	HOS2	P53096	452 aa	Predicted RBP	3.08	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 163.7 ms