RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeastyeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPB4YFL002C RIM20Q12033 661 aa4.3□□□□□ -1.72
SPB4YFL002C PRS5Q12265 496 aaKnown RBP4.3□□□□□ -1.72
SPB4YFL002C SPE4Q12455 300 aa4.3□□□□□ -1.72
SPB4YFL002C DFR1P07807 211 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
SPB4YFL002C PDE1P22434 369 aa4.29□□□□□ -1.72
SPB4YFL002C MNE1P24720 663 aa4.29□□□□□ -1.72
SPB4YFL002C MDL1P33310 695 aa4.29□□□□□ -1.72
SPB4YFL002C ELO3P40319 345 aa4.29□□□□□ -1.72
SPB4YFL002C YIL166CP40445 542 aa4.29□□□□□ -1.72
SPB4YFL002C SPT20P50875 604 aa4.29□□□□□ -1.72
SPB4YFL002C PAN2P53010 1115 aaPredicted RBP4.29□□□□□ -1.72
SPB4YFL002C ESC8Q08119 714 aa4.29□□□□□ -1.72
SPB4YFL002C YKL033W-AQ86ZR7 236 aa4.29□□□□□ -1.72
SPB4YFL002C CYB2P00175 591 aa4.28□□□□□ -1.72
SPB4YFL002C SIR3P06701 978 aa4.28□□□□□ -1.72
SPB4YFL002C CDC15P27636 974 aa4.28□□□□□ -1.72
SPB4YFL002C GPI10P30777 616 aa4.28□□□□□ -1.72
SPB4YFL002C PUB1P32588 453 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
SPB4YFL002C VID24P38263 362 aa4.28□□□□□ -1.72
SPB4YFL002C LYS4P49367 693 aaPredicted RBP4.28□□□□□ -1.72
SPB4YFL002C YGL036WP53185 909 aaPredicted RBP4.28□□□□□ -1.72
SPB4YFL002C ERB1Q04660 807 aaKnown RBP4.28□□□□□ -1.72
SPB4YFL002C YPL272CQ08984 517 aa4.28□□□□□ -1.72
SPB4YFL002C YPT6Q99260 215 aa4.28□□□□□ -1.72
SPB4YFL002C YBR085C-AO43137 85 aa4.28□□□□□ -1.72
SPB4YFL002C CLB3P24870 427 aa4.28□□□□□ -1.72
SPB4YFL002C FUB1P25659 250 aa4.28□□□□□ -1.72
SPB4YFL002C PHO11P35842 467 aa4.28□□□□□ -1.72
SPB4YFL002C ELF1P36053 145 aa4.28□□□□□ -1.72
SPB4YFL002C STB6P36085 766 aa4.28□□□□□ -1.72
SPB4YFL002C CST26P38226 397 aa4.28□□□□□ -1.72
SPB4YFL002C PHO12P38693 467 aa4.28□□□□□ -1.72
SPB4YFL002C ARO9P38840 513 aaPredicted RBP4.28□□□□□ -1.72
SPB4YFL002C SSU1P41930 458 aa4.28□□□□□ -1.72
SPB4YFL002C FHN1P53279 174 aa4.28□□□□□ -1.72
SPB4YFL002C OGG1P53397 376 aaPredicted RBP4.28□□□□□ -1.72
SPB4YFL002C SPC98P53540 846 aa4.28□□□□□ -1.72
SPB4YFL002C INA17Q02888 182 aa4.28□□□□□ -1.72
SPB4YFL002C IRC13Q08630 104 aa4.28□□□□□ -1.72
SPB4YFL002C PAR32Q12515 295 aaKnown RBP4.28□□□□□ -1.72
SPB4YFL002C RPS13P05756 151 aaKnown RBP4.27□□□□□ -1.73
SPB4YFL002C CDC5P32562 705 aa4.27□□□□□ -1.73
SPB4YFL002C LST4P34239 828 aa4.27□□□□□ -1.73
SPB4YFL002C SEC24P40482 926 aaKnown RBP4.27□□□□□ -1.73
SPB4YFL002C LCL3P53153 274 aa4.27□□□□□ -1.73
SPB4YFL002C ART5P53244 586 aaKnown RBP4.27□□□□□ -1.73
SPB4YFL002C DAK1P54838 584 aaKnown RBP4.27□□□□□ -1.73
SPB4YFL002C YML037CQ03703 340 aa4.27□□□□□ -1.73
SPB4YFL002C AIM32Q04689 311 aa4.27□□□□□ -1.73
SPB4YFL002C MLH3Q12083 715 aa4.27□□□□□ -1.73
SPB4YFL002C PDH1Q12428 516 aaKnown RBP4.27□□□□□ -1.73
SPB4YFL002C YER175W-AQ8TGU4 54 aa4.27□□□□□ -1.73
SPB4YFL002C DFG16Q99234 619 aa4.27□□□□□ -1.73
SPB4YFL002C STE12P13574 688 aa4.26□□□□□ -1.73
SPB4YFL002C THR1P17423 357 aaKnown RBP4.26□□□□□ -1.73
SPB4YFL002C CLB1P24868 471 aa4.26□□□□□ -1.73
SPB4YFL002C CCL1P37366 393 aa4.26□□□□□ -1.73
SPB4YFL002C RFC1P38630 861 aaKnown RBP4.26□□□□□ -1.73
SPB4YFL002C YNG2P38806 282 aaKnown RBP4.26□□□□□ -1.73
SPB4YFL002C LNP1P38878 278 aa4.26□□□□□ -1.73
SPB4YFL002C CCT6P39079 546 aa4.26□□□□□ -1.73
SPB4YFL002C GDI1P39958 451 aaKnown RBP4.26□□□□□ -1.73
SPB4YFL002C SEC28P40509 296 aaKnown RBP4.26□□□□□ -1.73
SPB4YFL002C YJL163CP46996 555 aa4.26□□□□□ -1.73
SPB4YFL002C MPP10P47083 593 aaKnown RBP4.26□□□□□ -1.73
SPB4YFL002C PEX25Q02969 394 aa4.26□□□□□ -1.73
SPB4YFL002C YSH1Q06224 779 aaPredicted RBP4.26□□□□□ -1.73
SPB4YFL002C MRI1Q06489 411 aaKnown RBP4.26□□□□□ -1.73
SPB4YFL002C YDL086WQ07505 273 aa4.26□□□□□ -1.73
SPB4YFL002C GPN2Q08726 347 aaPredicted RBP4.26□□□□□ -1.73
SPB4YFL002C BUD7Q08754 746 aa4.26□□□□□ -1.73
SPB4YFL002C SMF3Q12078 473 aaPredicted RBP4.26□□□□□ -1.73
SPB4YFL002C ABF1P14164 731 aa4.25□□□□□ -1.73
SPB4YFL002C APE1P14904 514 aa4.25□□□□□ -1.73
SPB4YFL002C KGD2P19262 463 aaPredicted RBP4.25□□□□□ -1.73
SPB4YFL002C AAD3P25612 363 aa4.25□□□□□ -1.73
SPB4YFL002C YIH1P25637 258 aa4.25□□□□□ -1.73
SPB4YFL002C RFA2P26754 273 aaKnown RBP4.25□□□□□ -1.73
SPB4YFL002C PDB1P32473 366 aaKnown RBP4.25□□□□□ -1.73
SPB4YFL002C HIS7P33734 552 aaKnown RBP4.25□□□□□ -1.73
SPB4YFL002C APE3P37302 537 aaKnown RBP4.25□□□□□ -1.73
SPB4YFL002C AGP2P38090 596 aa4.25□□□□□ -1.73
SPB4YFL002C POL12P38121 705 aaPredicted RBP4.25□□□□□ -1.73
SPB4YFL002C YHR097CP38809 366 aaKnown RBP4.25□□□□□ -1.73
SPB4YFL002C PES4P39684 611 aa4.25□□□□□ -1.73
SPB4YFL002C FMP52P40008 231 aa4.25□□□□□ -1.73
SPB4YFL002C DOT5P40553 215 aa4.25□□□□□ -1.73
SPB4YFL002C BUD27P43573 796 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
SPB4YFL002C YGR079WP53249 370 aa4.25□□□□□ -1.73
SPB4YFL002C BNI5P53890 448 aaKnown RBP4.25□□□□□ -1.73
SPB4YFL002C RPS15Q01855 142 aaKnown RBP4.25□□□□□ -1.73
SPB4YFL002C MFM1Q02783 413 aa4.25□□□□□ -1.73
SPB4YFL002C OAZ1Q02803 292 aa4.25□□□□□ -1.73
SPB4YFL002C VPS38Q05919 439 aa4.25□□□□□ -1.73
SPB4YFL002C YPL191CQ08930 360 aa4.25□□□□□ -1.73
SPB4YFL002C YCR051WP25631 222 aa4.25□□□□□ -1.73
SPB4YFL002C SGN1P40561 250 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
SPB4YFL002C STR3P53101 465 aaKnown RBP4.25□□□□□ -1.73
SPB4YFL002C SNF12P53628 566 aa4.25□□□□□ -1.73
SPB4YFL002C RIA1P53893 1110 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms