RNA–Protein interactions for RNA: YER128W

VFA1, Transcript of Protein that interacts with Vps4p and has a role in vacuolar sorting, yeastyeast

Gene VFA1, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VFA1YER128W RGT2Q12300 763 aa3.54□□□□□ -1.84
VFA1YER128W YBR182C-AQ8TGU6 64 aa3.54□□□□□ -1.84
VFA1YER128W SCC2Q04002 1493 aa3.54□□□□□ -1.84
VFA1YER128W GEA1P47102 1408 aaPredicted RBP3.53□□□□□ -1.84
VFA1YER128W NUP157P40064 1391 aaKnown RBP3.53□□□□□ -1.84
VFA1YER128W PDE2P06776 526 aa3.53□□□□□ -1.84
VFA1YER128W CIT2P08679 460 aa3.53□□□□□ -1.84
VFA1YER128W KGD2P19262 463 aaPredicted RBP3.53□□□□□ -1.84
VFA1YER128W CKA2P19454 339 aa3.53□□□□□ -1.84
VFA1YER128W HSP60P19882 572 aaKnown RBP3.53□□□□□ -1.84
VFA1YER128W TYR1P20049 452 aa3.53□□□□□ -1.84
VFA1YER128W DBF2P22204 572 aa3.53□□□□□ -1.84
VFA1YER128W SPB1P25582 841 aaPredicted RBP3.53□□□□□ -1.84
VFA1YER128W YUR1P26725 428 aa3.53□□□□□ -1.84
VFA1YER128W YME1P32795 747 aa3.53□□□□□ -1.84
VFA1YER128W NPL6P32832 435 aa3.53□□□□□ -1.84
VFA1YER128W RIB7P33312 244 aa3.53□□□□□ -1.84
VFA1YER128W PMT1P33775 817 aa3.53□□□□□ -1.84
VFA1YER128W YPT52P36018 234 aaKnown RBP3.53□□□□□ -1.84
VFA1YER128W STP2P38704 541 aa3.53□□□□□ -1.84
VFA1YER128W DED81P38707 554 aaKnown RBP3.53□□□□□ -1.84
VFA1YER128W HRB1P38922 454 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
VFA1YER128W AIM10P39965 576 aaKnown RBP3.53□□□□□ -1.84
VFA1YER128W FCY21P40039 528 aa3.53□□□□□ -1.84
VFA1YER128W JLP2P40206 208 aa3.53□□□□□ -1.84
VFA1YER128W ULP2P40537 1034 aaPredicted RBP3.53□□□□□ -1.84
VFA1YER128W INA22P40576 216 aa3.53□□□□□ -1.84
VFA1YER128W ROK1P45818 564 aaPredicted RBP3.53□□□□□ -1.84
VFA1YER128W SAE2P46946 345 aa3.53□□□□□ -1.84
VFA1YER128W YJL055WP47044 245 aa3.53□□□□□ -1.84
VFA1YER128W RBL2P48606 106 aaKnown RBP3.53□□□□□ -1.84
VFA1YER128W TOM22P49334 152 aa3.53□□□□□ -1.84
VFA1YER128W LIF1P53150 421 aa3.53□□□□□ -1.84
VFA1YER128W MNP1P53163 194 aaPredicted RBP3.53□□□□□ -1.84
VFA1YER128W RET3P53600 189 aa3.53□□□□□ -1.84
VFA1YER128W CIK1Q01649 594 aa3.53□□□□□ -1.84
VFA1YER128W YKU80Q04437 629 aa3.53□□□□□ -1.84
VFA1YER128W FAR8Q05040 523 aa3.53□□□□□ -1.84
VFA1YER128W YLR287CQ05881 355 aa3.53□□□□□ -1.84
VFA1YER128W SEC10Q06245 871 aa3.53□□□□□ -1.84
VFA1YER128W MCM21Q06675 368 aa3.53□□□□□ -1.84
VFA1YER128W SCM3Q12334 223 aa3.53□□□□□ -1.84
VFA1YER128W ADF1Q2V2Q1 113 aa3.53□□□□□ -1.84
VFA1YER128W YGR161W-CQ3E744 92 aa3.53□□□□□ -1.84
VFA1YER128W YLR149CQ99296 730 aa3.53□□□□□ -1.84
VFA1YER128W SSK2P53599 1579 aa3.53□□□□□ -1.84
VFA1YER128W DIF1O13577 133 aa3.52□□□□□ -1.85
VFA1YER128W YPR089WO13585 888 aa3.52□□□□□ -1.85
VFA1YER128W DSF1P0CX08 502 aa3.52□□□□□ -1.85
VFA1YER128W YNR073CP0CX09 502 aa3.52□□□□□ -1.85
VFA1YER128W GCD2P12754 651 aaPredicted RBP3.52□□□□□ -1.85
VFA1YER128W KRS1P15180 591 aaKnown RBP3.52□□□□□ -1.85
VFA1YER128W NCP1P16603 691 aaKnown RBP3.52□□□□□ -1.85
VFA1YER128W YCR016WP25617 290 aaKnown RBP3.52□□□□□ -1.85
VFA1YER128W MEI5P32489 222 aa3.52□□□□□ -1.85
VFA1YER128W CNS1P33313 385 aa3.52□□□□□ -1.85
VFA1YER128W YKT6P36015 200 aaKnown RBP3.52□□□□□ -1.85
VFA1YER128W TYS1P36421 394 aaKnown RBP3.52□□□□□ -1.85
VFA1YER128W STV1P37296 890 aa3.52□□□□□ -1.85
VFA1YER128W NOP4P37838 685 aaKnown RBP3.52□□□□□ -1.85
VFA1YER128W MNN2P38069 597 aa3.52□□□□□ -1.85
VFA1YER128W UTP9P38882 575 aaKnown RBP3.52□□□□□ -1.85
VFA1YER128W RPN10P38886 268 aaKnown RBP3.52□□□□□ -1.85
VFA1YER128W LYS9P38999 446 aa3.52□□□□□ -1.85
VFA1YER128W TIF4631P39935 952 aaKnown RBP3.52□□□□□ -1.85
VFA1YER128W XBP1P40489 647 aa3.52□□□□□ -1.85
VFA1YER128W SPO22P40511 975 aa3.52□□□□□ -1.85
VFA1YER128W AGE2P40529 298 aa3.52□□□□□ -1.85
VFA1YER128W RNR4P49723 345 aaKnown RBP3.52□□□□□ -1.85
VFA1YER128W IMD4P50094 524 aaKnown RBP3.52□□□□□ -1.85
VFA1YER128W MRPL50P53724 139 aa3.52□□□□□ -1.85
VFA1YER128W ARC35P53731 342 aaKnown RBP3.52□□□□□ -1.85
VFA1YER128W NCS2P53923 493 aaPredicted RBP3.52□□□□□ -1.85
VFA1YER128W MPS1P54199 764 aa3.52□□□□□ -1.85
VFA1YER128W YKR005CQ02203 525 aa3.52□□□□□ -1.85
VFA1YER128W MFM1Q02783 413 aa3.52□□□□□ -1.85
VFA1YER128W GYL1Q04322 720 aa3.52□□□□□ -1.85
VFA1YER128W MET5P47169 1442 aa3.52□□□□□ -1.85
VFA1YER128W MYO2P19524 1574 aaKnown RBP3.51□□□□□ -1.85
VFA1YER128W TUS1Q06412 1307 aa3.51□□□□□ -1.85
VFA1YER128W STF1P01098 86 aa3.51□□□□□ -1.85
VFA1YER128W PAB1P04147 577 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85 RIP-Chip
VFA1YER128W PHR1P05066 565 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
VFA1YER128W PIF1P07271 859 aa3.51□□□□□ -1.85
VFA1YER128W DAP2P18962 818 aa3.51□□□□□ -1.85
VFA1YER128W TRX1P22217 103 aaKnown RBP3.51□□□□□ -1.85
VFA1YER128W CLB3P24870 427 aa3.51□□□□□ -1.85
VFA1YER128W GRX1P25373 110 aaKnown RBP3.51□□□□□ -1.85
VFA1YER128W MSH2P25847 964 aa3.51□□□□□ -1.85
VFA1YER128W DOA4P32571 926 aa3.51□□□□□ -1.85
VFA1YER128W SRP40P32583 406 aaPredicted RBP3.51□□□□□ -1.85
VFA1YER128W MRP4P32902 394 aa3.51□□□□□ -1.85
VFA1YER128W SDS22P36047 338 aa3.51□□□□□ -1.85
VFA1YER128W YBR138CP38277 524 aa3.51□□□□□ -1.85
VFA1YER128W YHR112CP38716 378 aa3.51□□□□□ -1.85
VFA1YER128W VMA22P38784 181 aa3.51□□□□□ -1.85
VFA1YER128W SEC31P38968 1273 aaKnown RBP3.51□□□□□ -1.85
VFA1YER128W HXT6P39003 570 aaKnown RBP3.51□□□□□ -1.85
VFA1YER128W HXT7P39004 570 aa3.51□□□□□ -1.85
VFA1YER128W NOP16P40007 231 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms