RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	CHS6	P40955	746 aa		7.33	□□□□□ -1.24
SKP1	YDR328C	TDA10	P42938	290 aa		7.33	□□□□□ -1.24
SKP1	YDR328C	VEL1	P53058	206 aa		7.33	□□□□□ -1.24
SKP1	YDR328C	COG1	P53079	417 aa		7.33	□□□□□ -1.24
SKP1	YDR328C	PEX8	P53248	589 aa		7.33	□□□□□ -1.24
SKP1	YDR328C	TFB2	Q02939	513 aa		7.33	□□□□□ -1.24
SKP1	YDR328C	YDR132C	Q03900	495 aa		7.33	□□□□□ -1.24
SKP1	YDR328C	YHM2	Q04013	314 aa		7.33	□□□□□ -1.24
SKP1	YDR328C	PER33	Q12144	273 aa		7.33	□□□□□ -1.24
SKP1	YDR328C	FPR1	P20081	114 aa	Known RBP	7.32	□□□□□ -1.24
SKP1	YDR328C	AMD2	P22580	549 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	YSP3	P25036	478 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	RBK1	P25332	333 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	CDC10	P25342	322 aa	Known RBP	7.32	□□□□□ -1.24
SKP1	YDR328C	IMG2	P25642	146 aa	Predicted RBP	7.32	□□□□□ -1.24
SKP1	YDR328C	MSH2	P25847	964 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	PPZ1	P26570	692 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	LOS1	P33418	1100 aa	Predicted RBP	7.32	□□□□□ -1.24
SKP1	YDR328C	TFA2	P36145	328 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	NEM1	P38757	446 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	OAF1	P39720	1047 aa	Predicted RBP	7.32	□□□□□ -1.24
SKP1	YDR328C	SLX8	P40072	274 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	RGI2	P40188	164 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	PAN6	P40459	309 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	GYP8	P43570	497 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	RMD8	P43620	662 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	SIP4	P46954	829 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	PAN2	P53010	1115 aa	Predicted RBP	7.32	□□□□□ -1.24
SKP1	YDR328C	SAP4	P53036	818 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	FLC3	P53121	802 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	PRM1	P53835	661 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	YNL058C	P53947	316 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	SFB2	P53953	876 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	EFM6	P53970	246 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	YDR109C	Q04585	715 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	SYT1	Q06836	1226 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	RAD59	Q12223	238 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	YMR030W-A	Q3E760	96 aa		7.32	□□□□□ -1.24
SKP1	YDR328C	HIS5	P07172	385 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	GCY1	P14065	312 aa	Known RBP RIP-Chip data	7.31	□□□□□ -1.24	not detected
SKP1	YDR328C	SEC14	P24280	304 aa	Known RBP	7.31	□□□□□ -1.24
SKP1	YDR328C	MNE1	P24720	663 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	SGF29	P25554	259 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	DCC1	P25559	380 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	EMC1	P25574	760 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	MCM5	P29496	775 aa	Known RBP	7.31	□□□□□ -1.24
SKP1	YDR328C	IMP3	P32899	183 aa	Predicted RBP	7.31	□□□□□ -1.24
SKP1	YDR328C	CTF13	P35203	478 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	GND1	P38720	489 aa	Known RBP	7.31	□□□□□ -1.24
SKP1	YDR328C	MED6	P38782	295 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	LIN1	P38852	340 aa	Predicted RBP	7.31	□□□□□ -1.24
SKP1	YDR328C	SEC28	P40509	296 aa	Known RBP	7.31	□□□□□ -1.24
SKP1	YDR328C	PYK2	P52489	506 aa	Known RBP	7.31	□□□□□ -1.24
SKP1	YDR328C	YNR065C	P53751	1116 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	MRS2	Q01926	470 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	PET117	Q02771	107 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	YMR209C	Q03648	457 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	YPR114W	Q06107	315 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	MCP2	Q06567	569 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	ADY3	Q07732	790 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	RSB1	Q08417	382 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	RGS2	Q99188	309 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	MPD2	Q99316	277 aa		7.31	□□□□□ -1.24
SKP1	YDR328C	RPS14A	P06367	137 aa	Known RBP	7.3	□□□□□ -1.24
SKP1	YDR328C	GLN4	P13188	809 aa	Known RBP	7.3	□□□□□ -1.24
SKP1	YDR328C	AMD1	P15274	810 aa	Known RBP	7.3	□□□□□ -1.24
SKP1	YDR328C	BEM1	P29366	551 aa		7.3	□□□□□ -1.24
SKP1	YDR328C	GUT2	P32191	649 aa		7.3	□□□□□ -1.24
SKP1	YDR328C	SCD5	P34758	872 aa		7.3	□□□□□ -1.24
SKP1	YDR328C	SQT1	P35184	431 aa		7.3	□□□□□ -1.24
SKP1	YDR328C	RIM2	P38127	377 aa		7.3	□□□□□ -1.24
SKP1	YDR328C	YBR062C	P38239	180 aa		7.3	□□□□□ -1.24
SKP1	YDR328C	RPS14B	P39516	138 aa	Known RBP	7.3	□□□□□ -1.24
SKP1	YDR328C	TES1	P41903	349 aa	Known RBP	7.3	□□□□□ -1.24
SKP1	YDR328C	ARH1	P48360	493 aa		7.3	□□□□□ -1.24
SKP1	YDR328C	RCF2	P53721	224 aa		7.3	□□□□□ -1.24
SKP1	YDR328C	IMP4	P53941	290 aa	Known RBP	7.3	□□□□□ -1.24
SKP1	YDR328C	YML119W	Q03208	357 aa		7.3	□□□□□ -1.24
SKP1	YDR328C	TAF11	Q04226	346 aa		7.3	□□□□□ -1.24
SKP1	YDR328C	YLR177W	Q06251	628 aa		7.3	□□□□□ -1.24
SKP1	YDR328C	SPE4	Q12455	300 aa		7.3	□□□□□ -1.24
SKP1	YDR328C	YOR338W	Q99326	363 aa		7.3	□□□□□ -1.24
SKP1	YDR328C	FRT1	Q99332	602 aa		7.3	□□□□□ -1.24
SKP1	YDR328C	LEU1	P07264	779 aa	Known RBP	7.29	□□□□□ -1.24
SKP1	YDR328C	PMA2	P19657	947 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	YJU3	P28321	313 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	GCD11	P32481	527 aa	Known RBP	7.29	□□□□□ -1.24
SKP1	YDR328C	STE5	P32917	917 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	TOM20	P35180	183 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	PHO11	P35842	467 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	RRP14	P36080	434 aa	Known RBP	7.29	□□□□□ -1.24
SKP1	YDR328C	YKR023W	P36119	530 aa	Known RBP	7.29	□□□□□ -1.24
SKP1	YDR328C	PHO12	P38693	467 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	YHR182W	P38870	785 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	YJL206C	P39529	758 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	OSW5	P40219	148 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	YJR061W	P40355	935 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	YIR007W	P40566	764 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	GLG2	P47011	380 aa		7.29	□□□□□ -1.24
SKP1	YDR328C	CSN12	P47130	423 aa		7.29	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 37.6 ms