RNA–Protein interactions for RNA: YDR311W

TFB1, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB1, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB1	YDR311W	CTP1	P38152	299 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	SDH8	P38345	138 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	SMF1	P38925	575 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	YIL161W	P40449	235 aa	Known RBP	2.99	□□□□□ -1.93
TFB1	YDR311W	BUL1	P48524	976 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	RMT2	Q03305	412 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	USA1	Q03714	838 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	RPC11	Q04307	110 aa	Predicted RBP	2.99	□□□□□ -1.93
TFB1	YDR311W	LYS21	Q12122	440 aa	Known RBP	2.99	□□□□□ -1.93
TFB1	YDR311W	YKL033W-A	Q86ZR7	236 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	STE12	P13574	688 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	PMS1	P14242	873 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	APE1	P14904	514 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	THR1	P17423	357 aa	Known RBP	2.99	□□□□□ -1.93
TFB1	YDR311W	MNE1	P24720	663 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	LRE1	P25579	583 aa	Known RBP	2.99	□□□□□ -1.93
TFB1	YDR311W	FUB1	P25659	250 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	NTH1	P32356	751 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	HIS7	P33734	552 aa	Known RBP	2.99	□□□□□ -1.93
TFB1	YDR311W	RXT2	P38255	430 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	CAJ1	P39101	391 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	MET18	P40469	1032 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	YJL163C	P46996	555 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	ATP22	P50273	684 aa	Predicted RBP	2.99	□□□□□ -1.93
TFB1	YDR311W	FHN1	P53279	174 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	SNF12	P53628	566 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	JJJ1	P53863	590 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	YEH1	Q07804	573 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	ENB1	Q08299	606 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	GPN2	Q08726	347 aa	Predicted RBP	2.99	□□□□□ -1.93
TFB1	YDR311W	FRE5	Q08908	694 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	YPL272C	Q08984	517 aa		2.99	□□□□□ -1.93
TFB1	YDR311W	YSP3	P25036	478 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	CTS1	P29029	562 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	SRB5	P32585	307 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	REG2	P38232	338 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	CCT6	P39079	546 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	SEC24	P40482	926 aa	Known RBP	2.98	□□□□□ -1.93
TFB1	YDR311W	MET28	P40573	187 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	YGR079W	P53249	370 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	BTN2	P53286	410 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	DIP5	P53388	608 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	DAK1	P54838	584 aa	Known RBP	2.98	□□□□□ -1.93
TFB1	YDR311W	RPS15	Q01855	142 aa	Known RBP	2.98	□□□□□ -1.93
TFB1	YDR311W	YML119W	Q03208	357 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	ERB1	Q04660	807 aa	Known RBP	2.98	□□□□□ -1.93
TFB1	YDR311W	BUD7	Q08754	746 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	TCO89	Q08921	799 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	PGC1	Q08959	321 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	USV1	Q12132	391 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	YPT6	Q99260	215 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	ISN1	Q99312	450 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	SPT7	P35177	1332 aa		2.98	□□□□□ -1.93
TFB1	YDR311W	SIR3	P06701	978 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	MET3	P08536	511 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	STE50	P25344	346 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	CDC5	P32562	705 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	STB6	P36085	766 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	YPT10	P38146	199 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	REV7	P38927	245 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	YJL206C	P39529	758 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	PES4	P39684	611 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	ROK1	P45818	564 aa	Predicted RBP	2.97	□□□□□ -1.93
TFB1	YDR311W	NMA2	P53204	395 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	BNI5	P53890	448 aa	Known RBP	2.97	□□□□□ -1.93
TFB1	YDR311W	YML037C	Q03703	340 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	AIM32	Q04689	311 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	TMA10	Q06177	86 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	YDL086W	Q07505	273 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	RIM20	Q12033	661 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	PAR32	Q12515	295 aa	Known RBP	2.97	□□□□□ -1.93
TFB1	YDR311W	YBR255C-A	Q3E776	120 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	YER175W-A	Q8TGU4	54 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	CYB2	P00175	591 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	YPK1	P12688	680 aa	Known RBP	2.97	□□□□□ -1.93
TFB1	YDR311W	AMD2	P22580	549 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	MNN2	P38069	597 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	DJP1	P40564	432 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	LCB2	P40970	561 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	MAF1	P41910	395 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	SWP82	P43554	623 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	NPA3	P47122	385 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	BUD17	P53727	317 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	MFM1	Q02783	413 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	GTB1	Q04924	702 aa		2.97	□□□□□ -1.93
TFB1	YDR311W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
TFB1	YDR311W	YBR085C-A	O43137	85 aa		2.96	□□□□□ -1.94
TFB1	YDR311W	COX1	P00401	534 aa		2.96	□□□□□ -1.94
TFB1	YDR311W	SES1	P07284	462 aa	Known RBP	2.96	□□□□□ -1.94
TFB1	YDR311W	ARD1	P07347	238 aa	Predicted RBP	2.96	□□□□□ -1.94
TFB1	YDR311W	EST1	P17214	699 aa	Predicted RBP	2.96	□□□□□ -1.94
TFB1	YDR311W	PDE1	P22434	369 aa		2.96	□□□□□ -1.94
TFB1	YDR311W	KRR1	P25586	316 aa	Predicted RBP	2.96	□□□□□ -1.94
TFB1	YDR311W	MDL1	P33310	695 aa		2.96	□□□□□ -1.94
TFB1	YDR311W	UBP11	P36026	717 aa		2.96	□□□□□ -1.94
TFB1	YDR311W	KSP1	P38691	1029 aa	Known RBP	2.96	□□□□□ -1.94
TFB1	YDR311W	ZIM17	P42844	174 aa		2.96	□□□□□ -1.94
TFB1	YDR311W	ART5	P53244	586 aa	Known RBP	2.96	□□□□□ -1.94
TFB1	YDR311W	YGR151C	P53287	111 aa		2.96	□□□□□ -1.94
TFB1	YDR311W	SPC98	P53540	846 aa		2.96	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms