RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W FHL1P39521 936 aa2.19□□□□□ -2.06
SIR4YDR227W ICP55P40051 511 aa2.19□□□□□ -2.06
SIR4YDR227W BSC5P53755 489 aa2.19□□□□□ -2.06
SIR4YDR227W CIK1Q01649 594 aa2.19□□□□□ -2.06
SIR4YDR227W ADE13Q05911 482 aaKnown RBP2.19□□□□□ -2.06
SIR4YDR227W Q0010Q9ZZX9 128 aa2.19□□□□□ -2.06
SIR4YDR227W MSB2P32334 1306 aa2.19□□□□□ -2.06
SIR4YDR227W TEF1P02994 458 aaKnown RBP2.19□□□□□ -2.06
SIR4YDR227W SEC2P17065 759 aa2.19□□□□□ -2.06
SIR4YDR227W CLB3P24870 427 aa2.19□□□□□ -2.06
SIR4YDR227W RPC53P25441 422 aa2.19□□□□□ -2.06
SIR4YDR227W SBA1P28707 216 aaKnown RBP2.19□□□□□ -2.06
SIR4YDR227W MKK1P32490 508 aa2.19□□□□□ -2.06
SIR4YDR227W LRO1P40345 661 aa2.19□□□□□ -2.06
SIR4YDR227W VMA13P41807 478 aaKnown RBP2.19□□□□□ -2.06
SIR4YDR227W SKP2P42843 763 aa2.19□□□□□ -2.06
SIR4YDR227W SGM1P47166 707 aa2.19□□□□□ -2.06
SIR4YDR227W YIP5P53108 310 aa2.19□□□□□ -2.06
SIR4YDR227W RPN7Q06103 429 aaKnown RBP2.19□□□□□ -2.06
SIR4YDR227W MRPL35Q06678 367 aa2.19□□□□□ -2.06
SIR4YDR227W CTI6Q08923 506 aa2.19□□□□□ -2.06
SIR4YDR227W RAD50P12753 1312 aa2.19□□□□□ -2.06
SIR4YDR227W AGP1P25376 633 aa2.19□□□□□ -2.06
SIR4YDR227W MKK2P32491 506 aa2.19□□□□□ -2.06
SIR4YDR227W IFA38P38286 347 aa2.19□□□□□ -2.06
SIR4YDR227W YBR287WP38355 427 aa2.19□□□□□ -2.06
SIR4YDR227W AIM20P40451 204 aa2.19□□□□□ -2.06
SIR4YDR227W UTP8P53276 713 aaKnown RBP2.19□□□□□ -2.06
SIR4YDR227W GTR2P53290 341 aa2.19□□□□□ -2.06
SIR4YDR227W REG1Q00816 1014 aa2.19□□□□□ -2.06
SIR4YDR227W RRP17Q04031 235 aaPredicted RBP2.19□□□□□ -2.06
SIR4YDR227W YDR444WQ04093 687 aa2.19□□□□□ -2.06
SIR4YDR227W YLR413WQ06689 675 aa2.19□□□□□ -2.06
SIR4YDR227W SIL1Q08199 421 aa2.19□□□□□ -2.06
SIR4YDR227W CIR2Q08822 631 aa2.19□□□□□ -2.06
SIR4YDR227W RBD2Q12270 262 aa2.19□□□□□ -2.06
SIR4YDR227W PTC5Q12511 572 aa2.19□□□□□ -2.06
SIR4YDR227W RAD61Q99359 647 aa2.19□□□□□ -2.06
SIR4YDR227W SWI1P09547 1314 aa2.19□□□□□ -2.06
SIR4YDR227W GCN4P03069 281 aa2.18□□□□□ -2.06
SIR4YDR227W CKA1P15790 372 aa2.18□□□□□ -2.06
SIR4YDR227W MLF3P32047 452 aa2.18□□□□□ -2.06
SIR4YDR227W AFR1P33304 620 aa2.18□□□□□ -2.06
SIR4YDR227W FAU1P40099 211 aa2.18□□□□□ -2.06
SIR4YDR227W YIL161WP40449 235 aaKnown RBP2.18□□□□□ -2.06
SIR4YDR227W GCD14P46959 383 aaPredicted RBP2.18□□□□□ -2.06
SIR4YDR227W TEL2P53038 688 aa2.18□□□□□ -2.06
SIR4YDR227W LSB1P53281 241 aa2.18□□□□□ -2.06
SIR4YDR227W RTC4P53850 401 aa2.18□□□□□ -2.06
SIR4YDR227W IRC4Q03036 179 aa2.18□□□□□ -2.06
SIR4YDR227W TIF35Q04067 274 aaKnown RBP2.18□□□□□ -2.06
SIR4YDR227W TMN2Q04562 672 aa2.18□□□□□ -2.06
SIR4YDR227W MRD1Q06106 887 aaKnown RBP2.18□□□□□ -2.06
SIR4YDR227W YLR455WQ06188 304 aa2.18□□□□□ -2.06
SIR4YDR227W SNF1P06782 633 aaKnown RBP2.18□□□□□ -2.06
SIR4YDR227W AMD1P15274 810 aaKnown RBP2.18□□□□□ -2.06
SIR4YDR227W PDX1P16451 410 aa2.18□□□□□ -2.06
SIR4YDR227W CLB1P24868 471 aa2.18□□□□□ -2.06
SIR4YDR227W ERG6P25087 383 aaKnown RBP2.18□□□□□ -2.06
SIR4YDR227W SYP1P25623 870 aaKnown RBP2.18□□□□□ -2.06
SIR4YDR227W TCD2P36101 447 aaKnown RBP2.18□□□□□ -2.06
SIR4YDR227W RIC1P40395 1056 aa2.18□□□□□ -2.06
SIR4YDR227W NNF2P53253 936 aa2.18□□□□□ -2.06
SIR4YDR227W YNL144CP53907 740 aa2.18□□□□□ -2.06
SIR4YDR227W EFR3Q03653 782 aaKnown RBP2.18□□□□□ -2.06
SIR4YDR227W PPM1Q04081 328 aa2.18□□□□□ -2.06
SIR4YDR227W ARA2Q04212 335 aa2.18□□□□□ -2.06
SIR4YDR227W LUC7Q07508 261 aaPredicted RBP2.18□□□□□ -2.06
SIR4YDR227W VIK1Q12045 647 aa2.18□□□□□ -2.06
SIR4YDR227W REV1P12689 985 aa2.18□□□□□ -2.06
SIR4YDR227W KIN2P13186 1147 aaKnown RBP2.18□□□□□ -2.06
SIR4YDR227W RRP43P25359 394 aaPredicted RBP2.18□□□□□ -2.06
SIR4YDR227W SLA2P33338 968 aa2.18□□□□□ -2.06
SIR4YDR227W AHP1P38013 176 aaKnown RBP2.18□□□□□ -2.06
SIR4YDR227W EFM2P38347 419 aa2.18□□□□□ -2.06
SIR4YDR227W YHR045WP38775 560 aa2.18□□□□□ -2.06
SIR4YDR227W ACO2P39533 789 aa2.18□□□□□ -2.06
SIR4YDR227W TPA1P40032 644 aaKnown RBP2.18□□□□□ -2.06
SIR4YDR227W PKP1P40530 394 aa2.18□□□□□ -2.06
SIR4YDR227W KAP114P53067 1004 aa2.18□□□□□ -2.06
SIR4YDR227W TIM11P81449 96 aaPredicted RBP2.18□□□□□ -2.06
SIR4YDR227W ECM11Q04110 302 aa2.18□□□□□ -2.06
SIR4YDR227W HBT1Q07653 1046 aaKnown RBP2.18□□□□□ -2.06
SIR4YDR227W ZRT2Q12436 422 aa2.18□□□□□ -2.06
SIR4YDR227W TRM11Q12463 433 aa2.18□□□□□ -2.06
SIR4YDR227W MSF1P08425 469 aa2.17□□□□□ -2.06
SIR4YDR227W FUS3P16892 353 aaKnown RBP2.17□□□□□ -2.06
SIR4YDR227W VPS3P23643 1011 aa2.17□□□□□ -2.06
SIR4YDR227W STE50P25344 346 aa2.17□□□□□ -2.06
SIR4YDR227W LDB16P25587 256 aa2.17□□□□□ -2.06
SIR4YDR227W TRK2P28584 889 aa2.17□□□□□ -2.06
SIR4YDR227W IRS4P36115 615 aaKnown RBP2.17□□□□□ -2.06
SIR4YDR227W DSN1P40568 576 aa2.17□□□□□ -2.06
SIR4YDR227W AXL1P40851 1208 aa2.17□□□□□ -2.06
SIR4YDR227W YJL107CP42947 387 aa2.17□□□□□ -2.06
SIR4YDR227W UBP6P43593 499 aaKnown RBP2.17□□□□□ -2.06
SIR4YDR227W LSB3P43603 459 aaKnown RBP2.17□□□□□ -2.06
SIR4YDR227W YJR098CP47139 656 aa2.17□□□□□ -2.06
SIR4YDR227W PPT1P53043 513 aa2.17□□□□□ -2.06
SIR4YDR227W PBP1P53297 722 aaKnown RBP2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms