RNA–Protein interactions for RNA: YDR045C

RPC11, Transcript of RNA polymerase III subunit C11, yeast

Gene RPC11, Length 333 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC11	YDR045C	YJL055W	P47044	245 aa		4.12	□□□□□ -1.75
RPC11	YDR045C	DIP5	P53388	608 aa		4.12	□□□□□ -1.75
RPC11	YDR045C	DAK1	P54838	584 aa	Known RBP	4.12	□□□□□ -1.75
RPC11	YDR045C	YDL086W	Q07505	273 aa		4.12	□□□□□ -1.75
RPC11	YDR045C	PSR1	Q07800	427 aa		4.12	□□□□□ -1.75
RPC11	YDR045C	TRP4	P07285	380 aa	Predicted RBP	4.11	□□□□□ -1.75
RPC11	YDR045C	VMA16	P23968	213 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	RFA2	P26754	273 aa	Known RBP	4.11	□□□□□ -1.75
RPC11	YDR045C	MSS1	P32559	526 aa	Predicted RBP	4.11	□□□□□ -1.75
RPC11	YDR045C	MDL1	P33310	695 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	LOT5	P34234	306 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	GCS1	P35197	352 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	STB6	P36085	766 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	APL3	P38065	1025 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	ARO9	P38840	513 aa	Predicted RBP	4.11	□□□□□ -1.75
RPC11	YDR045C	MTG2	P38860	518 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	GDI1	P39958	451 aa	Known RBP	4.11	□□□□□ -1.75
RPC11	YDR045C	RGI2	P40188	164 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	LTP1	P40347	161 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	LCB2	P40970	561 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	YJL163C	P46996	555 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	INN1	P53901	409 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	TRS23	Q03784	219 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	ERB1	Q04660	807 aa	Known RBP	4.11	□□□□□ -1.75
RPC11	YDR045C	ATG23	Q06671	453 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	PAR32	Q12515	295 aa	Known RBP	4.11	□□□□□ -1.75
RPC11	YDR045C	YML133C	Q03099	1374 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	YLL067C	Q07888	1374 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	YLL066C	Q99208	1374 aa		4.11	□□□□□ -1.75
RPC11	YDR045C	YIH1	P25637	258 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	SRB5	P32585	307 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	LST4	P34239	828 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	YKL100C	P34248	587 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	KES1	P35844	434 aa	Known RBP	4.1	□□□□□ -1.75
RPC11	YDR045C	UBP13	P38187	747 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	AIM3	P38266	947 aa	Known RBP	4.1	□□□□□ -1.75
RPC11	YDR045C	OTU2	P38747	307 aa	Known RBP	4.1	□□□□□ -1.75
RPC11	YDR045C	SMF1	P38925	575 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	YEL057C	P39983	233 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	FMP52	P40008	231 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	SEC24	P40482	926 aa	Known RBP	4.1	□□□□□ -1.75
RPC11	YDR045C	VID30	P53076	958 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	YIP4	P53093	235 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	PIL1	P53252	339 aa	Known RBP	4.1	□□□□□ -1.75
RPC11	YDR045C	NNF2	P53253	936 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	BUD17	P53727	317 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	ERG5	P54781	538 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	VPS9	P54787	451 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	YAT1	P80235	687 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	AAT1	Q01802	451 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	USA1	Q03714	838 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	UFO1	Q04511	668 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	GTB1	Q04924	702 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	BUD7	Q08754	746 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	TGS1	Q12052	315 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	YJR112W-A	Q3E743	109 aa		4.1	□□□□□ -1.75
RPC11	YDR045C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
RPC11	YDR045C	STE12	P13574	688 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	EST1	P17214	699 aa	Predicted RBP	4.09	□□□□□ -1.75
RPC11	YDR045C	THR1	P17423	357 aa	Known RBP	4.09	□□□□□ -1.75
RPC11	YDR045C	CLB1	P24868	471 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	STE50	P25344	346 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	CCL1	P37366	393 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	CST26	P38226	397 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	VID24	P38263	362 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	YHR097C	P38809	366 aa	Known RBP	4.09	□□□□□ -1.75
RPC11	YDR045C	POP2	P39008	433 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	MET18	P40469	1032 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	SEC28	P40509	296 aa	Known RBP	4.09	□□□□□ -1.75
RPC11	YDR045C	ZIM17	P42844	174 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	RPS7B	P48164	190 aa	Known RBP	4.09	□□□□□ -1.75
RPC11	YDR045C	CTR1	P49573	406 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	MCM6	P53091	1017 aa	Known RBP	4.09	□□□□□ -1.75
RPC11	YDR045C	YGL036W	P53185	909 aa	Predicted RBP	4.09	□□□□□ -1.75
RPC11	YDR045C	NMA2	P53204	395 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	IMO32	P53219	342 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	YGR151C	P53287	111 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	YDR239C	Q03780	787 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	YDR286C	Q05530	114 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	CRN1	Q06440	651 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	SWA2	Q06677	668 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	YEH1	Q07804	573 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	MLH3	Q12083	715 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	PDH1	Q12428	516 aa	Known RBP	4.09	□□□□□ -1.75
RPC11	YDR045C	GRX6	Q12438	231 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	LAS17	Q12446	633 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	YOL159C-A	Q3E769	90 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	YBR255C-A	Q3E776	120 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	YPT6	Q99260	215 aa		4.09	□□□□□ -1.75
RPC11	YDR045C	CYB2	P00175	591 aa		4.08	□□□□□ -1.76
RPC11	YDR045C	ILS1	P09436	1072 aa	Known RBP	4.08	□□□□□ -1.76
RPC11	YDR045C	YPK1	P12688	680 aa	Known RBP	4.08	□□□□□ -1.76
RPC11	YDR045C	GAS1	P22146	559 aa	Known RBP	4.08	□□□□□ -1.76
RPC11	YDR045C	ADK2	P26364	225 aa		4.08	□□□□□ -1.76
RPC11	YDR045C	PAP1	P29468	568 aa	Known RBP	4.08	□□□□□ -1.76
RPC11	YDR045C	TFB1	P32776	642 aa		4.08	□□□□□ -1.76
RPC11	YDR045C	TOD6	P34219	525 aa		4.08	□□□□□ -1.76
RPC11	YDR045C	OMA1	P36163	345 aa		4.08	□□□□□ -1.76
RPC11	YDR045C	KSP1	P38691	1029 aa	Known RBP	4.08	□□□□□ -1.76
RPC11	YDR045C	ECL1	P48235	211 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms