RNA–Protein interactions for RNA: YDL077C

VAM6, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VAM6, Length 3,150 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM6YDL077C TY4B-HP0C2J7 1802 aa1.1□□□□□ -2.23
VAM6YDL077C TY4B-JP47024 1803 aa1.1□□□□□ -2.23
VAM6YDL077C FOB1O13329 566 aa1.1□□□□□ -2.23
VAM6YDL077C CYC7P00045 113 aa1.1□□□□□ -2.23
VAM6YDL077C RAD10P06838 210 aa1.1□□□□□ -2.23
VAM6YDL077C ADE5,7P07244 802 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C ARG80P07249 177 aa1.1□□□□□ -2.23
VAM6YDL077C GFA1P14742 717 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C MSD1P15179 658 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C GUK1P15454 187 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C POL30P15873 258 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C VMA2P16140 517 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C SPO12P17123 173 aa1.1□□□□□ -2.23
VAM6YDL077C PRP4P20053 465 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C RPA135P22138 1203 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C PRE9P23638 258 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C RAD57P25301 460 aa1.1□□□□□ -2.23
VAM6YDL077C SPS22P25380 463 aa1.1□□□□□ -2.23
VAM6YDL077C SYP1P25623 870 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C RAD14P28519 371 aa1.1□□□□□ -2.23
VAM6YDL077C MEI5P32489 222 aa1.1□□□□□ -2.23
VAM6YDL077C PEP7P32609 515 aa1.1□□□□□ -2.23
VAM6YDL077C NPL6P32832 435 aa1.1□□□□□ -2.23
VAM6YDL077C PTM1P32857 523 aa1.1□□□□□ -2.23
VAM6YDL077C PTR2P32901 601 aa1.1□□□□□ -2.23
VAM6YDL077C ATO2P32907 282 aa1.1□□□□□ -2.23
VAM6YDL077C PDR3P33200 976 aa1.1□□□□□ -2.23
VAM6YDL077C LST4P34239 828 aa1.1□□□□□ -2.23
VAM6YDL077C SCD5P34758 872 aa1.1□□□□□ -2.23
VAM6YDL077C TAF14P35189 244 aa1.1□□□□□ -2.23
VAM6YDL077C JEN1P36035 616 aa1.1□□□□□ -2.23
VAM6YDL077C CBT1P36038 271 aaPredicted RBP1.1□□□□□ -2.23
VAM6YDL077C VPS51P36116 164 aa1.1□□□□□ -2.23
VAM6YDL077C BOI1P38041 980 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C PEX32P38292 413 aa1.1□□□□□ -2.23
VAM6YDL077C ERV15P38312 142 aa1.1□□□□□ -2.23
VAM6YDL077C TSC10P38342 320 aa1.1□□□□□ -2.23
VAM6YDL077C APM2P38700 605 aa1.1□□□□□ -2.23
VAM6YDL077C APE4P38821 490 aa1.1□□□□□ -2.23
VAM6YDL077C VPS45P38932 577 aa1.1□□□□□ -2.23
VAM6YDL077C RAD55P38953 406 aa1.1□□□□□ -2.23
VAM6YDL077C POP2P39008 433 aa1.1□□□□□ -2.23
VAM6YDL077C PES4P39684 611 aa1.1□□□□□ -2.23
VAM6YDL077C SSO2P39926 295 aa1.1□□□□□ -2.23
VAM6YDL077C ALD5P40047 520 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C SMX2P40204 77 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C SHQ1P40486 507 aaPredicted RBP1.1□□□□□ -2.23
VAM6YDL077C MND2P40577 368 aa1.1□□□□□ -2.23
VAM6YDL077C HXT8P40886 569 aa1.1□□□□□ -2.23
VAM6YDL077C AGP3P43548 558 aa1.1□□□□□ -2.23
VAM6YDL077C DAK2P43550 591 aa1.1□□□□□ -2.23
VAM6YDL077C AGX1P43567 385 aa1.1□□□□□ -2.23
VAM6YDL077C IRC6P43615 237 aa1.1□□□□□ -2.23
VAM6YDL077C DAS1P47005 663 aa1.1□□□□□ -2.23
VAM6YDL077C EMC2P47133 292 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C ABM1P47146 123 aa1.1□□□□□ -2.23
VAM6YDL077C SSN8P47821 323 aa1.1□□□□□ -2.23
VAM6YDL077C LYS4P49367 693 aaPredicted RBP1.1□□□□□ -2.23
VAM6YDL077C OCA1P50946 238 aaPredicted RBP1.1□□□□□ -2.23
VAM6YDL077C MPC1P53157 130 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C SWC4P53201 476 aa1.1□□□□□ -2.23
VAM6YDL077C PBP1P53297 722 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C YPL109CQ02981 657 aa1.1□□□□□ -2.23
VAM6YDL077C FCP1Q03254 732 aa1.1□□□□□ -2.23
VAM6YDL077C FIN1Q03898 291 aa1.1□□□□□ -2.23
VAM6YDL077C SYF1Q04048 859 aaPredicted RBP1.1□□□□□ -2.23
VAM6YDL077C RBS1Q05672 457 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C COQ9Q05779 260 aa1.1□□□□□ -2.23
VAM6YDL077C DUS3Q06053 668 aaKnown RBP1.1□□□□□ -2.23
VAM6YDL077C GAS2Q06135 555 aa1.1□□□□□ -2.23
VAM6YDL077C DXO1Q06349 442 aa1.1□□□□□ -2.23
VAM6YDL077C VPS74Q06385 345 aa1.1□□□□□ -2.23
VAM6YDL077C MLC2Q06580 163 aa1.1□□□□□ -2.23
VAM6YDL077C YET3Q07451 203 aa1.1□□□□□ -2.23
VAM6YDL077C YPD1Q07688 167 aa1.1□□□□□ -2.23
VAM6YDL077C RTT109Q07794 436 aa1.1□□□□□ -2.23
VAM6YDL077C MCH5Q08777 521 aa1.1□□□□□ -2.23
VAM6YDL077C FEX1Q08913 375 aa1.1□□□□□ -2.23
VAM6YDL077C YPL216WQ08964 1102 aa1.1□□□□□ -2.23
VAM6YDL077C FMP40Q08968 688 aaPredicted RBP1.1□□□□□ -2.23
VAM6YDL077C ULA1Q12059 462 aa1.1□□□□□ -2.23
VAM6YDL077C SSF2Q12153 453 aaPredicted RBP1.1□□□□□ -2.23
VAM6YDL077C MCD1Q12158 566 aa1.1□□□□□ -2.23
VAM6YDL077C AVL9Q12500 764 aa1.1□□□□□ -2.23
VAM6YDL077C TSC13Q99190 310 aa1.1□□□□□ -2.23
VAM6YDL077C YPT6Q99260 215 aa1.1□□□□□ -2.23
VAM6YDL077C COQ4O13525 335 aa1.09□□□□□ -2.23
VAM6YDL077C MF(ALPHA)1P01149 165 aa1.09□□□□□ -2.23
VAM6YDL077C TPK2P06245 380 aa1.09□□□□□ -2.23
VAM6YDL077C CHS1P08004 1131 aa1.09□□□□□ -2.23
VAM6YDL077C IMA3P0CW40 589 aa1.09□□□□□ -2.23
VAM6YDL077C IMA4P0CW41 589 aa1.09□□□□□ -2.23
VAM6YDL077C CDC24P11433 854 aaPredicted RBP1.09□□□□□ -2.23
VAM6YDL077C NCP1P16603 691 aaKnown RBP1.09□□□□□ -2.23
VAM6YDL077C SRV2P17555 526 aaKnown RBP1.09□□□□□ -2.23
VAM6YDL077C UGA1P17649 471 aa1.09□□□□□ -2.23
VAM6YDL077C PRI2P20457 528 aa1.09□□□□□ -2.23
VAM6YDL077C KGD1P20967 1014 aaKnown RBP1.09□□□□□ -2.23
VAM6YDL077C SGV1P23293 657 aaKnown RBP1.09□□□□□ -2.23
VAM6YDL077C HXT2P23585 541 aa1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 69.3 ms