RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W YMR134WP40207 237 aa5.78□□□□□ -1.48
SHM1YBR263W YJR079WP47126 109 aa5.78□□□□□ -1.48
SHM1YBR263W MAL13P53338 473 aa5.78□□□□□ -1.48
SHM1YBR263W TOF2Q02208 771 aa5.78□□□□□ -1.48
SHM1YBR263W YPL014WQ02606 381 aa5.78□□□□□ -1.48
SHM1YBR263W YHM2Q04013 314 aa5.78□□□□□ -1.48
SHM1YBR263W SEG1Q04279 960 aa5.78□□□□□ -1.48
SHM1YBR263W RTN1Q04947 295 aaKnown RBP5.78□□□□□ -1.48
SHM1YBR263W GRX8Q05926 109 aa5.78□□□□□ -1.48
SHM1YBR263W RMP1Q12530 201 aa5.78□□□□□ -1.48
SHM1YBR263W CCH1P50077 2039 aa5.77□□□□□ -1.49
SHM1YBR263W RPS14AP06367 137 aaKnown RBP5.77□□□□□ -1.49
SHM1YBR263W HSF1P10961 833 aa5.77□□□□□ -1.49
SHM1YBR263W REV1P12689 985 aa5.77□□□□□ -1.49
SHM1YBR263W SGF29P25554 259 aa5.77□□□□□ -1.49
SHM1YBR263W SGE1P33335 543 aa5.77□□□□□ -1.49
SHM1YBR263W BYE1P36106 594 aa5.77□□□□□ -1.49
SHM1YBR263W KTR4P38131 464 aa5.77□□□□□ -1.49
SHM1YBR263W PBP2P38151 413 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
SHM1YBR263W DIA4P38705 446 aaPredicted RBP5.77□□□□□ -1.49
SHM1YBR263W CCT4P39078 528 aaKnown RBP5.77□□□□□ -1.49
SHM1YBR263W RPS14BP39516 138 aaKnown RBP5.77□□□□□ -1.49
SHM1YBR263W YEL028WP39989 153 aa5.77□□□□□ -1.49
SHM1YBR263W NMD5P46970 1048 aa5.77□□□□□ -1.49
SHM1YBR263W PRP24P49960 444 aaKnown RBP5.77□□□□□ -1.49
SHM1YBR263W TAN1P53072 289 aaPredicted RBP5.77□□□□□ -1.49
SHM1YBR263W YGR127WP53275 312 aa5.77□□□□□ -1.49
SHM1YBR263W SFB2P53953 876 aa5.77□□□□□ -1.49
SHM1YBR263W VPS60Q03390 229 aa5.77□□□□□ -1.49
SHM1YBR263W INP2Q03824 705 aa5.77□□□□□ -1.49
SHM1YBR263W FAP7Q12055 197 aaPredicted RBP5.77□□□□□ -1.49
SHM1YBR263W HIS5P07172 385 aa5.77□□□□□ -1.49
SHM1YBR263W PUP3P25451 205 aaKnown RBP5.77□□□□□ -1.49
SHM1YBR263W GPI10P30777 616 aa5.77□□□□□ -1.49
SHM1YBR263W TOA1P32773 286 aa5.77□□□□□ -1.49
SHM1YBR263W RPS0AP32905 252 aaKnown RBP5.77□□□□□ -1.49
SHM1YBR263W KAP104P38217 918 aaKnown RBP5.77□□□□□ -1.49
SHM1YBR263W TIF5P38431 405 aaKnown RBP5.77□□□□□ -1.49
SHM1YBR263W MED6P38782 295 aa5.77□□□□□ -1.49
SHM1YBR263W PPE1P38796 400 aa5.77□□□□□ -1.49
SHM1YBR263W HEM14P40012 539 aa5.77□□□□□ -1.49
SHM1YBR263W DOT6P40059 670 aaKnown RBP5.77□□□□□ -1.49
SHM1YBR263W ATM1P40416 690 aa5.77□□□□□ -1.49
SHM1YBR263W CEP3P40969 608 aa5.77□□□□□ -1.49
SHM1YBR263W BST1P43571 1029 aa5.77□□□□□ -1.49
SHM1YBR263W RPS10BP46784 105 aaKnown RBP5.77□□□□□ -1.49
SHM1YBR263W MNN11P46985 422 aaKnown RBP5.77□□□□□ -1.49
SHM1YBR263W RSM26P47141 266 aa5.77□□□□□ -1.49
SHM1YBR263W HLJ1P48353 224 aa5.77□□□□□ -1.49
SHM1YBR263W VPS9P54787 451 aa5.77□□□□□ -1.49
SHM1YBR263W YMR206WQ03695 313 aa5.77□□□□□ -1.49
SHM1YBR263W YCS4Q06156 1176 aa5.77□□□□□ -1.49
SHM1YBR263W CDA2Q06703 312 aa5.77□□□□□ -1.49
SHM1YBR263W YLR012CQ07927 99 aa5.77□□□□□ -1.49
SHM1YBR263W IRC10Q08118 586 aa5.77□□□□□ -1.49
SHM1YBR263W RPS10AQ08745 105 aaPredicted RBP5.77□□□□□ -1.49
SHM1YBR263W NDD1Q08887 554 aa5.77□□□□□ -1.49
SHM1YBR263W EFG1Q3E705 233 aaKnown RBP5.77□□□□□ -1.49
SHM1YBR263W NOP14Q99207 810 aaKnown RBP5.77□□□□□ -1.49
SHM1YBR263W FLP1P03870 423 aa5.76□□□□□ -1.49
SHM1YBR263W PRP9P19736 530 aaKnown RBP5.76□□□□□ -1.49
SHM1YBR263W KIN3P22209 435 aa5.76□□□□□ -1.49
SHM1YBR263W SWE1P32944 819 aa5.76□□□□□ -1.49
SHM1YBR263W CNS1P33313 385 aa5.76□□□□□ -1.49
SHM1YBR263W FUI1P38196 639 aa5.76□□□□□ -1.49
SHM1YBR263W UBP7P40453 1071 aa5.76□□□□□ -1.49
SHM1YBR263W MND2P40577 368 aa5.76□□□□□ -1.49
SHM1YBR263W CHS6P40955 746 aa5.76□□□□□ -1.49
SHM1YBR263W ERG10P41338 398 aaKnown RBP5.76□□□□□ -1.49
SHM1YBR263W YNL320WP42840 284 aa5.76□□□□□ -1.49
SHM1YBR263W UTP6Q02354 440 aaKnown RBP5.76□□□□□ -1.49
SHM1YBR263W HOS3Q02959 697 aaKnown RBP5.76□□□□□ -1.49
SHM1YBR263W ADI1Q03677 179 aa5.76□□□□□ -1.49
SHM1YBR263W RRB1Q04225 511 aaKnown RBP5.76□□□□□ -1.49
SHM1YBR263W SWC7Q06707 132 aa5.76□□□□□ -1.49
SHM1YBR263W YLL056CQ12177 298 aa5.76□□□□□ -1.49
SHM1YBR263W AVL9Q12500 764 aa5.76□□□□□ -1.49
SHM1YBR263W SEY1Q99287 776 aa5.76□□□□□ -1.49
SHM1YBR263W AI5_ALPHAQ9ZZX1 630 aa5.76□□□□□ -1.49
SHM1YBR263W MIS1P09440 975 aaKnown RBP5.75□□□□□ -1.49
SHM1YBR263W CDC24P11433 854 aaPredicted RBP5.75□□□□□ -1.49
SHM1YBR263W ARF2P19146 181 aaKnown RBP5.75□□□□□ -1.49
SHM1YBR263W KAR9P32526 644 aa5.75□□□□□ -1.49
SHM1YBR263W VHC1P38329 1120 aa5.75□□□□□ -1.49
SHM1YBR263W OTU2P38747 307 aaKnown RBP5.75□□□□□ -1.49
SHM1YBR263W NEM1P38757 446 aa5.75□□□□□ -1.49
SHM1YBR263W VAC8P39968 578 aa5.75□□□□□ -1.49
SHM1YBR263W GYP8P43570 497 aa5.75□□□□□ -1.49
SHM1YBR263W RMD8P43620 662 aa5.75□□□□□ -1.49
SHM1YBR263W DLD2P46681 530 aaKnown RBP5.75□□□□□ -1.49
SHM1YBR263W ATG36P46983 293 aa5.75□□□□□ -1.49
SHM1YBR263W YJL132WP47014 750 aa5.75□□□□□ -1.49
SHM1YBR263W ASN2P49090 572 aaKnown RBP5.75□□□□□ -1.49
SHM1YBR263W SUB1P54000 292 aaKnown RBP5.75□□□□□ -1.49
SHM1YBR263W ORC3P54790 616 aa5.75□□□□□ -1.49
SHM1YBR263W SSY1Q03770 852 aa5.75□□□□□ -1.49
SHM1YBR263W BSC2Q05611 235 aa5.75□□□□□ -1.49
SHM1YBR263W ATG23Q06671 453 aa5.75□□□□□ -1.49
SHM1YBR263W NSE1Q07913 336 aa5.75□□□□□ -1.49
SHM1YBR263W FLC1Q08967 793 aa5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms