RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W TUF1P02992 437 aaKnown RBP3.09□□□□□ -1.91
SWD3YBR175W TUB3P09734 445 aaKnown RBP3.09□□□□□ -1.91
SWD3YBR175W SEC12P11655 471 aa3.09□□□□□ -1.91
SWD3YBR175W STE12P13574 688 aa3.09□□□□□ -1.91
SWD3YBR175W ERG6P25087 383 aaKnown RBP3.09□□□□□ -1.91
SWD3YBR175W KAR4P25583 335 aa3.09□□□□□ -1.91
SWD3YBR175W POL4P25615 582 aa3.09□□□□□ -1.91
SWD3YBR175W PRE2P30656 287 aaKnown RBP3.09□□□□□ -1.91
SWD3YBR175W SWC3P31376 625 aa3.09□□□□□ -1.91
SWD3YBR175W MGM1P32266 881 aa3.09□□□□□ -1.91
SWD3YBR175W GCD7P32502 381 aaPredicted RBP3.09□□□□□ -1.91
SWD3YBR175W UBP11P36026 717 aa3.09□□□□□ -1.91
SWD3YBR175W TDP1P38319 544 aa3.09□□□□□ -1.91
SWD3YBR175W YBR259WP38338 688 aa3.09□□□□□ -1.91
SWD3YBR175W CHS7P38843 316 aa3.09□□□□□ -1.91
SWD3YBR175W RTS1P38903 757 aa3.09□□□□□ -1.91
SWD3YBR175W ARB1P40024 610 aaKnown RBP3.09□□□□□ -1.91
SWD3YBR175W RGI2P40188 164 aa3.09□□□□□ -1.91
SWD3YBR175W PFK26P40433 827 aaKnown RBP3.09□□□□□ -1.91
SWD3YBR175W THI6P41835 540 aa3.09□□□□□ -1.91
SWD3YBR175W ZIM17P42844 174 aa3.09□□□□□ -1.91
SWD3YBR175W ASE1P50275 885 aa3.09□□□□□ -1.91
SWD3YBR175W JJJ1P53863 590 aa3.09□□□□□ -1.91
SWD3YBR175W BNI5P53890 448 aaKnown RBP3.09□□□□□ -1.91
SWD3YBR175W INN1P53901 409 aa3.09□□□□□ -1.91
SWD3YBR175W YNL058CP53947 316 aa3.09□□□□□ -1.91
SWD3YBR175W YPL107WQ02873 248 aa3.09□□□□□ -1.91
SWD3YBR175W NGL2Q03264 515 aaKnown RBP3.09□□□□□ -1.91
SWD3YBR175W RSF1Q05043 376 aa3.09□□□□□ -1.91
SWD3YBR175W STP3Q05937 343 aa3.09□□□□□ -1.91
SWD3YBR175W KEL3Q08979 651 aaPredicted RBP3.09□□□□□ -1.91
SWD3YBR175W RIM20Q12033 661 aa3.09□□□□□ -1.91
SWD3YBR175W LYS21Q12122 440 aaKnown RBP3.09□□□□□ -1.91
SWD3YBR175W SWM1Q12379 170 aa3.09□□□□□ -1.91
SWD3YBR175W LTE1P07866 1435 aa3.09□□□□□ -1.92
SWD3YBR175W DNF1P32660 1571 aa3.08□□□□□ -1.92
SWD3YBR175W MDH1P17505 334 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
SWD3YBR175W SEC15P22224 910 aa3.08□□□□□ -1.92
SWD3YBR175W POT1P27796 417 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
SWD3YBR175W SMI1P32566 505 aa3.08□□□□□ -1.92
SWD3YBR175W MAL33P38157 468 aa3.08□□□□□ -1.92
SWD3YBR175W GET2P40056 285 aa3.08□□□□□ -1.92
SWD3YBR175W SLZ1P40167 298 aa3.08□□□□□ -1.92
SWD3YBR175W DOT5P40553 215 aa3.08□□□□□ -1.92
SWD3YBR175W MET28P40573 187 aa3.08□□□□□ -1.92
SWD3YBR175W SKP2P42843 763 aa3.08□□□□□ -1.92
SWD3YBR175W BUD27P43573 796 aaKnown RBP RIP-Chip data3.08□□□□□ -1.92not detected
SWD3YBR175W ROK1P45818 564 aaPredicted RBP3.08□□□□□ -1.92
SWD3YBR175W PHO23P50947 330 aa3.08□□□□□ -1.92
SWD3YBR175W LCL3P53153 274 aa3.08□□□□□ -1.92
SWD3YBR175W MUB1Q03162 620 aa3.08□□□□□ -1.92
SWD3YBR175W HOF1Q05080 669 aa3.08□□□□□ -1.92
SWD3YBR175W THI22Q06490 572 aa3.08□□□□□ -1.92
SWD3YBR175W ERG27Q12452 347 aaKnown RBP3.08□□□□□ -1.92
SWD3YBR175W YJR112W-AQ3E743 109 aa3.08□□□□□ -1.92
SWD3YBR175W PNO1Q99216 274 aaKnown RBP3.08□□□□□ -1.92
SWD3YBR175W HRP1Q99383 534 aaKnown RBP3.08□□□□□ -1.92
SWD3YBR175W MDS3P53094 1487 aa3.08□□□□□ -1.92
SWD3YBR175W CET1O13297 549 aaPredicted RBP3.07□□□□□ -1.92
SWD3YBR175W TRP4P07285 380 aaPredicted RBP3.07□□□□□ -1.92
SWD3YBR175W DFR1P07807 211 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
SWD3YBR175W SUI2P20459 304 aaKnown RBP3.07□□□□□ -1.92
SWD3YBR175W VPS33P20795 691 aa3.07□□□□□ -1.92
SWD3YBR175W REC107P21651 314 aa3.07□□□□□ -1.92
SWD3YBR175W YCR051WP25631 222 aa3.07□□□□□ -1.92
SWD3YBR175W URA7P28274 579 aaKnown RBP3.07□□□□□ -1.92
SWD3YBR175W UIP5P36137 443 aa3.07□□□□□ -1.92
SWD3YBR175W LAS1P36146 502 aaPredicted RBP3.07□□□□□ -1.92
SWD3YBR175W VID24P38263 362 aa3.07□□□□□ -1.92
SWD3YBR175W TIF4631P39935 952 aaKnown RBP3.07□□□□□ -1.92
SWD3YBR175W YIL161WP40449 235 aaKnown RBP3.07□□□□□ -1.92
SWD3YBR175W EFM4P40516 257 aa3.07□□□□□ -1.92
SWD3YBR175W FYV8P46949 817 aaKnown RBP3.07□□□□□ -1.92
SWD3YBR175W IDS2P46958 469 aa3.07□□□□□ -1.92
SWD3YBR175W TCB2P48231 1178 aa3.07□□□□□ -1.92
SWD3YBR175W BUL1P48524 976 aa3.07□□□□□ -1.92
SWD3YBR175W TEX1P53851 422 aaKnown RBP3.07□□□□□ -1.92
SWD3YBR175W EOS1P53938 366 aa3.07□□□□□ -1.92
SWD3YBR175W FDC1Q03034 503 aa3.07□□□□□ -1.92
SWD3YBR175W NRG1Q03125 231 aa3.07□□□□□ -1.92
SWD3YBR175W YML037CQ03703 340 aa3.07□□□□□ -1.92
SWD3YBR175W GAD1Q04792 585 aa3.07□□□□□ -1.92
SWD3YBR175W FMP45Q07651 309 aa3.07□□□□□ -1.92
SWD3YBR175W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
SWD3YBR175W AIM39Q08223 395 aa3.07□□□□□ -1.92
SWD3YBR175W BUD7Q08754 746 aa3.07□□□□□ -1.92
SWD3YBR175W TCO89Q08921 799 aa3.07□□□□□ -1.92
SWD3YBR175W GPM3Q12326 303 aa3.07□□□□□ -1.92
SWD3YBR175W LAS17Q12446 633 aa3.07□□□□□ -1.92
SWD3YBR175W SPE4Q12455 300 aa3.07□□□□□ -1.92
SWD3YBR175W TAF2P23255 1407 aa3.07□□□□□ -1.92
SWD3YBR175W BNI1P41832 1953 aa3.07□□□□□ -1.92
SWD3YBR175W RPC40P07703 335 aaKnown RBP3.06□□□□□ -1.92
SWD3YBR175W ERV1P27882 189 aa3.06□□□□□ -1.92
SWD3YBR175W PAP1P29468 568 aaKnown RBP3.06□□□□□ -1.92
SWD3YBR175W SWH1P35845 1188 aa3.06□□□□□ -1.92
SWD3YBR175W AUR1P36107 401 aaPredicted RBP3.06□□□□□ -1.92
SWD3YBR175W GEX2P36173 615 aa3.06□□□□□ -1.92
SWD3YBR175W SIF2P38262 535 aa3.06□□□□□ -1.92
SWD3YBR175W COS111P38308 924 aa3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms