RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 ERCC5P28715 1186 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-233ENST00000642021 RAD9BQ6WBX8 426 aa15.76■□□□□ 0.11
PHGDH-233ENST00000642021 STAMQ92783 540 aa15.76■□□□□ 0.11
PHGDH-233ENST00000642021 SYMPKQ92797 1274 aaKnown RBP15.76■□□□□ 0.11
PHGDH-233ENST00000642021 PAGE5Q96GU1 130 aa15.76■□□□□ 0.11
PHGDH-233ENST00000642021 TMEM51Q9NW97 253 aa15.76■□□□□ 0.11
PHGDH-233ENST00000642021 ABCF2Q9UG63 623 aa15.76■□□□□ 0.11
PHGDH-233ENST00000642021 CEP131Q9UPN4 1083 aa15.76■□□□□ 0.11
PHGDH-233ENST00000642021 V9GY48 417 aaPredicted RBP15.76■□□□□ 0.11
PHGDH-233ENST00000642021 TRIM75PA6NK02 468 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 RBL2Q08999 1139 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 CUL4BQ13620 913 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 KANK3Q6NY19 840 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 SH3RF1Q7Z6J0 888 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 ENAHQ8N8S7 591 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-233ENST00000642021 NOL10Q9BSC4 688 aaKnown RBP15.75■□□□□ 0.11
PHGDH-233ENST00000642021 RNF26Q9BY78 433 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-233ENST00000642021 AATFQ9NY61 560 aaKnown RBP eCLIP15.75■□□□□ 0.11
PHGDH-233ENST00000642021 NUP98P52948 1817 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 PPP2R3AQ06190 1150 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 PHF20Q9BVI0 1012 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 RNF41Q9H4P4 317 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-233ENST00000642021 ARGLU1Q9NWB6 273 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-233ENST00000642021 TIAM2Q8IVF5 1701 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 LRP5O75197 1615 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 ERICH4A6NGS2 130 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 AKR1B15C9JRZ8 316 aaPredicted RBP15.75■□□□□ 0.11
PHGDH-233ENST00000642021 EIF5P55010 431 aaKnown RBP15.75■□□□□ 0.11
PHGDH-233ENST00000642021 CHRNDQ07001 517 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 DPYDQ12882 1025 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 ZNF174Q15697 407 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 TEX35Q5T0J7 233 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 RSRC2Q7L4I2 434 aaKnown RBP15.75■□□□□ 0.11
PHGDH-233ENST00000642021 MTA3Q9BTC8 594 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 LZTFL1Q9NQ48 299 aa15.75■□□□□ 0.11
PHGDH-233ENST00000642021 GOLGA6L9A6NEM1 432 aa15.74■□□□□ 0.11
PHGDH-233ENST00000642021 TBC1D8O95759 1140 aa15.74■□□□□ 0.11
PHGDH-233ENST00000642021 EVX2Q03828 476 aa15.74■□□□□ 0.11
PHGDH-233ENST00000642021 SPATA1Q5VX52 437 aa15.74■□□□□ 0.11
PHGDH-233ENST00000642021 PPP1R3GB7ZBB8 358 aa15.74■□□□□ 0.11
PHGDH-233ENST00000642021 PBX1P40424 430 aa15.74■□□□□ 0.11
PHGDH-233ENST00000642021 RCAN1P53805 252 aa15.74■□□□□ 0.11
PHGDH-233ENST00000642021 NPY5RQ15761 445 aa15.74■□□□□ 0.11
PHGDH-233ENST00000642021 IGSF22Q8N9C0 903 aa15.74■□□□□ 0.11
PHGDH-233ENST00000642021 ESR2Q92731 530 aa15.74■□□□□ 0.11
PHGDH-233ENST00000642021 ADD3Q9UEY8 706 aaKnown RBP15.74■□□□□ 0.11
PHGDH-233ENST00000642021 GYG1P46976 350 aa15.73■□□□□ 0.11
PHGDH-233ENST00000642021 DYNLL1P63167 89 aaKnown RBP15.73■□□□□ 0.11
PHGDH-233ENST00000642021 AKAP17AQ02040 695 aaKnown RBP15.73■□□□□ 0.11
PHGDH-233ENST00000642021 CC2D1AQ6P1N0 951 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-233ENST00000642021 INTS5Q6P9B9 1019 aaKnown RBP15.73■□□□□ 0.11
PHGDH-233ENST00000642021 CCDC12Q8WUD4 166 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-233ENST00000642021 AK7Q96M32 723 aa15.73■□□□□ 0.11
PHGDH-233ENST00000642021 PARD6BQ9BYG5 372 aa15.73■□□□□ 0.11
PHGDH-233ENST00000642021 ZSWIM4Q9H7M6 989 aa15.73■□□□□ 0.11
PHGDH-233ENST00000642021 ZCCHC17Q9NP64 241 aaKnown RBP15.73■□□□□ 0.11
PHGDH-233ENST00000642021 ADGRG1Q9Y653 693 aa15.73■□□□□ 0.11
PHGDH-233ENST00000642021 ITGB4P16144 1822 aa15.73■□□□□ 0.11
PHGDH-233ENST00000642021 XIRP1Q702N8 1843 aaKnown RBP15.73■□□□□ 0.11
PHGDH-233ENST00000642021 KRT2P35908 639 aa15.73■□□□□ 0.11
PHGDH-233ENST00000642021 CDKAL1Q5VV42 579 aa15.73■□□□□ 0.11
PHGDH-233ENST00000642021 ZSCAN10Q96SZ4 725 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-233ENST00000642021 RIOK1Q9BRS2 568 aaKnown RBP15.73■□□□□ 0.11
PHGDH-233ENST00000642021 CHD4Q14839 1912 aa15.73■□□□□ 0.11
PHGDH-233ENST00000642021 DOCK2Q92608 1830 aa15.73■□□□□ 0.11
PHGDH-233ENST00000642021 MAGEB6P1A0A0J9YX57 407 aa15.72■□□□□ 0.11
PHGDH-233ENST00000642021 ADAMTS3O15072 1205 aa15.72■□□□□ 0.11
PHGDH-233ENST00000642021 POLR3GO15318 223 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-233ENST00000642021 IGHMBP2P38935 993 aaKnown RBP15.72■□□□□ 0.11
PHGDH-233ENST00000642021 TROAPQ12815 778 aa15.72■□□□□ 0.11
PHGDH-233ENST00000642021 GPR161Q8N6U8 529 aaKnown RBP15.72■□□□□ 0.11
PHGDH-233ENST00000642021 PANX2Q96RD6 677 aa15.72■□□□□ 0.11
PHGDH-233ENST00000642021 ANAPC4Q9UJX5 808 aa15.72■□□□□ 0.11
PHGDH-233ENST00000642021 ANKRD36CQ5JPF3 1778 aa15.72■□□□□ 0.11
PHGDH-233ENST00000642021 PRPF3O43395 683 aaKnown RBP15.72■□□□□ 0.11
PHGDH-233ENST00000642021 ABL1P00519 1130 aa15.72■□□□□ 0.11
PHGDH-233ENST00000642021 VEGFAP15692 232 aaPredicted RBP15.72■□□□□ 0.11
PHGDH-233ENST00000642021 ZNF384Q8TF68 577 aa15.72■□□□□ 0.11
PHGDH-233ENST00000642021 TNFRSF25Q93038 417 aa15.72■□□□□ 0.11
PHGDH-233ENST00000642021 SYNRGQ9UMZ2 1314 aa15.72■□□□□ 0.11
PHGDH-233ENST00000642021 TPM1P09493 284 aa15.71■□□□□ 0.11
PHGDH-233ENST00000642021 CCDC175P0C221 793 aa15.71■□□□□ 0.11
PHGDH-233ENST00000642021 CASP14P31944 242 aa15.71■□□□□ 0.11
PHGDH-233ENST00000642021 FXR1P51114 621 aaKnown RBP eCLIP15.71■□□□□ 0.116e-7■■■■□ 19.4
PHGDH-233ENST00000642021 CCDC152Q4G0S7 254 aa15.71■□□□□ 0.11
PHGDH-233ENST00000642021 UBXN6Q9BZV1 441 aa15.71■□□□□ 0.11
PHGDH-233ENST00000642021 BLZF1Q9H2G9 400 aa15.71■□□□□ 0.11
PHGDH-233ENST00000642021 COL4A1P02462 1669 aa15.71■□□□□ 0.11
PHGDH-233ENST00000642021 RNF225M0QZC1 329 aaPredicted RBP15.71■□□□□ 0.11
PHGDH-233ENST00000642021 IFIT1BQ5T764 474 aaKnown RBP15.71■□□□□ 0.11
PHGDH-233ENST00000642021 MTRQ99707 1265 aa15.71■□□□□ 0.11
PHGDH-233ENST00000642021 ARAP2Q8WZ64 1704 aa15.71■□□□□ 0.1
PHGDH-233ENST00000642021 TFRCP02786 760 aaKnown RBP15.7■□□□□ 0.1
PHGDH-233ENST00000642021 CHRM1P11229 460 aaPredicted RBP15.7■□□□□ 0.1
PHGDH-233ENST00000642021 PTGDRQ13258 359 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 PPFIBP1Q86W92 1011 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 BCORQ6W2J9 1755 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 EXOC5O00471 708 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 NMT2O60551 498 aa15.7■□□□□ 0.1
PHGDH-233ENST00000642021 CAMTA2O94983 1202 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms