RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 KCNN1Q92952 543 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 EIF2AK1Q9BQI3 630 aaKnown RBP6.86□□□□□ -1.31
NECAP1-222ENST00000640072 URI1O94763 535 aaPredicted RBP6.86□□□□□ -1.31
NECAP1-222ENST00000640072 PCNAP12004 261 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 CASP2P42575 452 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 ZC3H12BQ5HYM0 836 aaKnown RBP6.86□□□□□ -1.31
NECAP1-222ENST00000640072 CNNM3Q8NE01 707 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 C8orf48Q96LL4 319 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 RBM42Q9BTD8 480 aaKnown RBP6.86□□□□□ -1.31
NECAP1-222ENST00000640072 GDPD2Q9HCC8 539 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 BATF3Q9NR55 127 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 WDR37Q9Y2I8 494 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 DNMBPQ6XZF7 1577 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 GOLGA6L9A6NEM1 432 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 OPA1O60313 960 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 PAHP00439 452 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 CCDC192P0DO97 292 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 ATP6V1E1P36543 226 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 UBA7P41226 1012 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 CCT5P48643 541 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 SCNN1BP51168 640 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 NLRP12P59046 1061 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 ZSCAN25Q6NSZ9 544 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 PODNQ7Z5L7 613 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 GPIHBP1Q8IV16 184 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 SYCP3Q8IZU3 236 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 NBPF15Q8N660 670 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 ANKRD42Q8N9B4 389 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 NLRP7Q8WX94 980 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 E2F7Q96AV8 911 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 ALG1Q9BT22 464 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 TUBA8Q9NY65 449 aaPredicted RBP6.86□□□□□ -1.31
NECAP1-222ENST00000640072 LIMCH1Q9UPQ0 1083 aa6.86□□□□□ -1.31
NECAP1-222ENST00000640072 CCDC163A0A0D9SF12 145 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 NEMFO60524 1076 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 STAMBPO95630 424 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 NCAM1P13591 858 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 PSMA3P25788 255 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 PDE3AQ14432 1141 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 TRIM68Q6AZZ1 485 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 CATSPER4Q7RTX7 472 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 AFAP1Q8N556 730 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 SPIRE2Q8WWL2 714 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 KIF15Q9NS87 1388 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 KIF21AQ7Z4S6 1674 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 FYB1O15117 783 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 LILRB3O75022 631 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 RPS6KA5O75582 802 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 BCAR3O75815 825 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 ALOX15P16050 662 aaPredicted RBP6.85□□□□□ -1.31
NECAP1-222ENST00000640072 ZFXP17010 805 aaPredicted RBP6.85□□□□□ -1.31
NECAP1-222ENST00000640072 RASA1P20936 1047 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 USP11P51784 963 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 EVCP57679 992 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 CDCA2Q69YH5 1023 aaPredicted RBP6.85□□□□□ -1.31
NECAP1-222ENST00000640072 RCSD1Q6JBY9 416 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 CCDC144CPQ8IYA2 1237 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 OR8H2Q8N162 312 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 LMBR1Q8WVP7 490 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 JPH3Q8WXH2 748 aaPredicted RBP6.85□□□□□ -1.31
NECAP1-222ENST00000640072 TSC22D3Q99576 134 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 CORO1BQ9BR76 489 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 PAPOLBQ9NRJ5 636 aaKnown RBP6.85□□□□□ -1.31
NECAP1-222ENST00000640072 CUEDC1Q9NWM3 386 aaPredicted RBP6.85□□□□□ -1.31
NECAP1-222ENST00000640072 CFDP1Q9UEE9 299 aaPredicted RBP6.85□□□□□ -1.31
NECAP1-222ENST00000640072 RTCAO00442 366 aaKnown RBP6.85□□□□□ -1.31
NECAP1-222ENST00000640072 NDUFAB1O14561 156 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 SMIM24O75264 130 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 AGR2O95994 175 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 SSBP05455 408 aaKnown RBP eCLIP6.85□□□□□ -1.31
NECAP1-222ENST00000640072 ATF7P17544 494 aaPredicted RBP6.85□□□□□ -1.31
NECAP1-222ENST00000640072 YY1P25490 414 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 PKP1Q13835 747 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 SHROOM1Q2M3G4 852 aaPredicted RBP6.85□□□□□ -1.31
NECAP1-222ENST00000640072 CCDC50Q8IVM0 306 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 LINC00469Q8N7U9 141 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 PPHLN1Q8NEY8 458 aaKnown RBP6.85□□□□□ -1.31
NECAP1-222ENST00000640072 PGBD4Q96DM1 585 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 NAT10Q9H0A0 1025 aaKnown RBP6.85□□□□□ -1.31
NECAP1-222ENST00000640072 VCPKMTQ9H867 229 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 PDE11AQ9HCR9 933 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 ANO2Q9NQ90 1003 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 ORC3Q9UBD5 711 aaPredicted RBP6.85□□□□□ -1.31
NECAP1-222ENST00000640072 DKK3Q9UBP4 350 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 STK39Q9UEW8 545 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 PFDN2Q9UHV9 154 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 PPP2R3BQ9Y5P8 575 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 PIK3R4Q99570 1358 aa6.85□□□□□ -1.31
NECAP1-222ENST00000640072 ABCC8Q09428 1581 aa6.84□□□□□ -1.31
NECAP1-222ENST00000640072 KIF21BO75037 1637 aa6.84□□□□□ -1.31
NECAP1-222ENST00000640072 HSPA8P11142 646 aaKnown RBP6.84□□□□□ -1.31
NECAP1-222ENST00000640072 ATF3P18847 181 aa6.84□□□□□ -1.31
NECAP1-222ENST00000640072 CUL3Q13618 768 aa6.84□□□□□ -1.31
NECAP1-222ENST00000640072 RASSF3Q86WH2 238 aa6.84□□□□□ -1.31
NECAP1-222ENST00000640072 MFN1Q8IWA4 741 aa6.84□□□□□ -1.31
NECAP1-222ENST00000640072 GALNT6Q8NCL4 622 aa6.84□□□□□ -1.31
NECAP1-222ENST00000640072 C7orf57Q8NEG2 295 aa6.84□□□□□ -1.31
NECAP1-222ENST00000640072 BRSK1Q8TDC3 778 aa6.84□□□□□ -1.31
NECAP1-222ENST00000640072 CHAMP1Q96JM3 812 aa6.84□□□□□ -1.31
NECAP1-222ENST00000640072 PARD6BQ9BYG5 372 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms