RNA–Protein interactions for RNA: ENST00000639824.1

HNRNPU-221, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-221ENST00000639824 PRPF3O43395 683 aaKnown RBP13.02□□□□□ -0.33
HNRNPU-221ENST00000639824 MYO1BO43795 1136 aa13.02□□□□□ -0.33
HNRNPU-221ENST00000639824 TM4SF1P30408 202 aa13.02□□□□□ -0.33
HNRNPU-221ENST00000639824 KCNQ4P56696 695 aa13.02□□□□□ -0.33
HNRNPU-221ENST00000639824 NLRP12P59046 1061 aa13.02□□□□□ -0.33
HNRNPU-221ENST00000639824 DYNLL1P63167 89 aaKnown RBP13.02□□□□□ -0.33
HNRNPU-221ENST00000639824 NKX2-3Q8TAU0 364 aa13.02□□□□□ -0.33
HNRNPU-221ENST00000639824 NUP133Q8WUM0 1156 aa13.02□□□□□ -0.33
HNRNPU-221ENST00000639824 ZKSCAN3Q9BRR0 538 aa13.02□□□□□ -0.33
HNRNPU-221ENST00000639824 TTC12Q9H892 705 aaPredicted RBP13.02□□□□□ -0.33
HNRNPU-221ENST00000639824 GJB4Q9NTQ9 266 aa13.02□□□□□ -0.33
HNRNPU-221ENST00000639824 FAM13BQ9NYF5 915 aa13.02□□□□□ -0.33
HNRNPU-221ENST00000639824 TRPC5Q9UL62 973 aaPredicted RBP13.02□□□□□ -0.33
HNRNPU-221ENST00000639824 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.02□□□□□ -0.33
HNRNPU-221ENST00000639824 BAG3O95817 575 aa13.01□□□□□ -0.33
HNRNPU-221ENST00000639824 ST5P78524 1137 aa13.01□□□□□ -0.33
HNRNPU-221ENST00000639824 SLC27A3Q5K4L6 730 aa13.01□□□□□ -0.33
HNRNPU-221ENST00000639824 KANK3Q6NY19 840 aa13.01□□□□□ -0.33
HNRNPU-221ENST00000639824 C11orf57Q6ZUT1 292 aaPredicted RBP13.01□□□□□ -0.33
HNRNPU-221ENST00000639824 ENAHQ8N8S7 591 aaPredicted RBP13.01□□□□□ -0.33
HNRNPU-221ENST00000639824 CTCFLQ8NI51 663 aaPredicted RBP13.01□□□□□ -0.33
HNRNPU-221ENST00000639824 DCP1AQ9NPI6 582 aaPredicted RBP13.01□□□□□ -0.33
HNRNPU-221ENST00000639824 ANKIB1Q9P2G1 1089 aa13.01□□□□□ -0.33
HNRNPU-221ENST00000639824 CLIP2Q9UDT6 1046 aa13.01□□□□□ -0.33
HNRNPU-221ENST00000639824 UBR3Q6ZT12 1888 aa13□□□□□ -0.33
HNRNPU-221ENST00000639824 IRS2Q9Y4H2 1338 aa13□□□□□ -0.33
HNRNPU-221ENST00000639824 POTEMA6NI47 508 aa13□□□□□ -0.33
HNRNPU-221ENST00000639824 USP17L12C9JPN9 530 aa13□□□□□ -0.33
HNRNPU-221ENST00000639824 USP17L21D6R901 530 aa13□□□□□ -0.33
HNRNPU-221ENST00000639824 LDHBP07195 334 aaKnown RBP13□□□□□ -0.33
HNRNPU-221ENST00000639824 KIF5BP33176 963 aa13□□□□□ -0.33
HNRNPU-221ENST00000639824 CHAF1AQ13111 956 aaPredicted RBP13□□□□□ -0.33
HNRNPU-221ENST00000639824 DNTTIP2Q5QJE6 756 aaKnown RBP13□□□□□ -0.33
HNRNPU-221ENST00000639824 TMC4Q7Z404 712 aa13□□□□□ -0.33
HNRNPU-221ENST00000639824 SPC24Q8NBT2 197 aa13□□□□□ -0.33
HNRNPU-221ENST00000639824 KIAA1524Q8TCG1 905 aa13□□□□□ -0.33
HNRNPU-221ENST00000639824 CERKQ8TCT0 537 aa13□□□□□ -0.33
HNRNPU-221ENST00000639824 RPGRQ92834 1020 aaKnown RBP13□□□□□ -0.33
HNRNPU-221ENST00000639824 PRIMPOLQ96LW4 560 aa13□□□□□ -0.33
HNRNPU-221ENST00000639824 ZNF287Q9HBT7 754 aa13□□□□□ -0.33
HNRNPU-221ENST00000639824 BTBD18B2RXH4 712 aa12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 IKBKBO14920 756 aa12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 WDHD1O75717 1129 aaPredicted RBP12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 ATP2B4P23634 1241 aa12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 MARCKSP29966 332 aaPredicted RBP12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 KRT2P35908 639 aa12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 NFIXQ14938 502 aa12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 POTEGQ6S5H5 508 aa12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 FAM196AQ6ZSG2 479 aa12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 PTF1AQ7RTS3 328 aa12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 DHX40Q8IX18 779 aaKnown RBP12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 SLF2Q8IX21 1173 aa12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 FAM177A1Q8N128 213 aaPredicted RBP12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 ZNF384Q8TF68 577 aa12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 AATFQ9NY61 560 aaKnown RBP eCLIP12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 TFCP2L1Q9NZI6 479 aa12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 TUBE1Q9UJT0 475 aa12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 R3HCC1Q9Y3T6 440 aaKnown RBP12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 ROBO3Q96MS0 1386 aa12.99□□□□□ -0.33
HNRNPU-221ENST00000639824 MROH7-TTC4A0A0A0MT08 1334 aa12.98□□□□□ -0.33
HNRNPU-221ENST00000639824 PTPREP23469 700 aa12.98□□□□□ -0.33
HNRNPU-221ENST00000639824 GSDMDP57764 484 aa12.98□□□□□ -0.33
HNRNPU-221ENST00000639824 PPP4CP60510 307 aa12.98□□□□□ -0.33
HNRNPU-221ENST00000639824 TROAPQ12815 778 aa12.98□□□□□ -0.33
HNRNPU-221ENST00000639824 LCE2DQ5TA82 110 aaPredicted RBP12.98□□□□□ -0.33
HNRNPU-221ENST00000639824 SHC4Q6S5L8 630 aa12.98□□□□□ -0.33
HNRNPU-221ENST00000639824 TMTC3Q6ZXV5 915 aa12.98□□□□□ -0.33
HNRNPU-221ENST00000639824 CCDC186Q7Z3E2 898 aa12.98□□□□□ -0.33
HNRNPU-221ENST00000639824 AOPEPQ8N6M6 819 aa12.98□□□□□ -0.33
HNRNPU-221ENST00000639824 RBM17Q96I25 401 aaKnown RBP12.98□□□□□ -0.33
HNRNPU-221ENST00000639824 IMPACTQ9P2X3 320 aa12.98□□□□□ -0.33
HNRNPU-221ENST00000639824 KCNH3Q9ULD8 1083 aa12.98□□□□□ -0.33
HNRNPU-221ENST00000639824 NAV1Q8NEY1 1877 aa12.98□□□□□ -0.33
HNRNPU-221ENST00000639824 AFF2P51816 1311 aa12.98□□□□□ -0.33
HNRNPU-221ENST00000639824 NRDCO43847 1150 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 BBOX1O75936 387 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 KLRK1P26718 216 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 PRDX5P30044 214 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 GNAQP50148 359 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 CRY2Q49AN0 593 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 OLFM4Q6UX06 510 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 KRBA2Q6ZNG9 492 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 DGKHQ86XP1 1220 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 CNNM3Q8NE01 707 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 ZNF830Q96NB3 372 aaPredicted RBP12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 PYM1Q9BRP8 204 aaKnown RBP12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 PHF20Q9BVI0 1012 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 DACH1Q9UI36 760 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 SRPRBQ9Y5M8 271 aaKnown RBP12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 TRIM75PA6NK02 468 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 TSPY2A6NKD2 308 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 PTGS1P23219 599 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 GUCY1A2P33402 732 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 USP5P45974 858 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 TRAPPC10P48553 1259 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 FUT2Q10981 343 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 SEPT12Q8IYM1 358 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 STK11IPQ8N1F8 1099 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 TBC1D22AQ8WUA7 517 aa12.97□□□□□ -0.33
HNRNPU-221ENST00000639824 ANKS1AQ92625 1134 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms