RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 A0A1W2PQ64 194 aa16.16■□□□□ 0.18
SCARB2-216ENST00000639300 A0A1W2PQD8 194 aa16.16■□□□□ 0.18
SCARB2-216ENST00000639300 SMCO2A6NFE2 343 aa16.16■□□□□ 0.18
SCARB2-216ENST00000639300 DYNLL1P63167 89 aaKnown RBP16.16■□□□□ 0.18
SCARB2-216ENST00000639300 CNNM4Q6P4Q7 775 aa16.16■□□□□ 0.18
SCARB2-216ENST00000639300 CABP7Q86V35 215 aa16.16■□□□□ 0.18
SCARB2-216ENST00000639300 TDRD7Q8NHU6 1098 aaKnown RBP16.16■□□□□ 0.18
SCARB2-216ENST00000639300 RESTQ13127 1097 aa16.16■□□□□ 0.18
SCARB2-216ENST00000639300 TOB2Q14106 344 aaPredicted RBP16.16■□□□□ 0.18
SCARB2-216ENST00000639300 CYP26C1Q6V0L0 522 aa16.16■□□□□ 0.18
SCARB2-216ENST00000639300 KRT25Q7Z3Z0 450 aa16.16■□□□□ 0.18
SCARB2-216ENST00000639300 TTLL11Q8NHH1 800 aa16.16■□□□□ 0.18
SCARB2-216ENST00000639300 TCHPQ9BT92 498 aa16.16■□□□□ 0.18
SCARB2-216ENST00000639300 SELENOOQ9BVL4 669 aa16.16■□□□□ 0.18
SCARB2-216ENST00000639300 BIN2Q9UBW5 565 aaPredicted RBP16.16■□□□□ 0.18
SCARB2-216ENST00000639300 HLFQ16534 295 aa16.16■□□□□ 0.18
SCARB2-216ENST00000639300 TMTC1Q8IUR5 882 aa16.16■□□□□ 0.18
SCARB2-216ENST00000639300 NELFCDQ8IXH7 590 aa16.16■□□□□ 0.18
SCARB2-216ENST00000639300 GBP2P32456 591 aaPredicted RBP16.16■□□□□ 0.18
SCARB2-216ENST00000639300 KIF23Q02241 960 aaPredicted RBP16.16■□□□□ 0.18
SCARB2-216ENST00000639300 TTF2Q9UNY4 1162 aaKnown RBP16.16■□□□□ 0.18
SCARB2-216ENST00000639300 ARAP3Q8WWN8 1544 aa16.15■□□□□ 0.18
SCARB2-216ENST00000639300 TULP4Q9NRJ4 1543 aa16.15■□□□□ 0.18
SCARB2-216ENST00000639300 BLIDQ8IZY5 108 aa16.15■□□□□ 0.18
SCARB2-216ENST00000639300 PLCD4Q9BRC7 762 aa16.15■□□□□ 0.18
SCARB2-216ENST00000639300 TMEM110-MUSTN1A8MSY1 372 aa16.15■□□□□ 0.18
SCARB2-216ENST00000639300 FAM207AQ9NSI2 230 aaPredicted RBP16.15■□□□□ 0.18
SCARB2-216ENST00000639300 CYP2D7A0A087X1C5 515 aa16.15■□□□□ 0.18
SCARB2-216ENST00000639300 SCG2P13521 617 aa16.15■□□□□ 0.18
SCARB2-216ENST00000639300 ETF1P62495 437 aaKnown RBP16.15■□□□□ 0.18
SCARB2-216ENST00000639300 GOLGA8FQ08AF8 430 aa16.15■□□□□ 0.18
SCARB2-216ENST00000639300 GOLGA8DPQ0D2H9 430 aa16.15■□□□□ 0.18
SCARB2-216ENST00000639300 DPP8Q6V1X1 898 aaPredicted RBP16.15■□□□□ 0.18
SCARB2-216ENST00000639300 LCORLQ8N3X6 602 aa16.15■□□□□ 0.18
SCARB2-216ENST00000639300 ARPP21Q9UBL0 812 aaPredicted RBP16.15■□□□□ 0.18
SCARB2-216ENST00000639300 MED23Q9ULK4 1368 aa16.15■□□□□ 0.18
SCARB2-216ENST00000639300 KLRF2D3W0D1 207 aa16.14■□□□□ 0.18
SCARB2-216ENST00000639300 PIH1D3Q9NQM4 214 aaKnown RBP16.14■□□□□ 0.18
SCARB2-216ENST00000639300 GOLGA6L10A0A0M3HER8 536 aa16.14■□□□□ 0.17
SCARB2-216ENST00000639300 ATP2C2O75185 946 aa16.14■□□□□ 0.17
SCARB2-216ENST00000639300 ADCY7P51828 1080 aa16.14■□□□□ 0.17
SCARB2-216ENST00000639300 CALCRLQ16602 461 aa16.14■□□□□ 0.17
SCARB2-216ENST00000639300 GRAMD1CQ8IYS0 662 aa16.14■□□□□ 0.17
SCARB2-216ENST00000639300 ATRIPQ8WXE1 791 aa16.14■□□□□ 0.17
SCARB2-216ENST00000639300 TIGD1Q96MW7 591 aa16.14■□□□□ 0.17
SCARB2-216ENST00000639300 GTPBP4Q9BZE4 634 aaKnown RBP16.14■□□□□ 0.17
SCARB2-216ENST00000639300 USH1GQ495M9 461 aa16.14■□□□□ 0.17
SCARB2-216ENST00000639300 ATG3Q9NT62 314 aa16.14■□□□□ 0.17
SCARB2-216ENST00000639300 POLR3EQ9NVU0 708 aa16.14■□□□□ 0.17
SCARB2-216ENST00000639300 FAM170AA1A519 330 aa16.14■□□□□ 0.17
SCARB2-216ENST00000639300 VAV2P52735 878 aa16.14■□□□□ 0.17
SCARB2-216ENST00000639300 TTC14Q96N46 770 aa16.14■□□□□ 0.17
SCARB2-216ENST00000639300 NLRC4Q9NPP4 1024 aa16.14■□□□□ 0.17
SCARB2-216ENST00000639300 DESP17661 470 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 CDC25AP30304 524 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 MAGEA1P43355 309 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 KIAA1524Q8TCG1 905 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 INCENPQ9NQS7 918 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 CROCC2H7BZ55 1655 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 ANKARQ7Z5J8 1434 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 CETN3O15182 167 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 RPL13P26373 211 aaKnown RBP16.13■□□□□ 0.17
SCARB2-216ENST00000639300 RASGRF1Q13972 1273 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 UBE4AQ14139 1066 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 RASGRP4Q8TDF6 673 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 JAKMIP2Q96AA8 810 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 CSRNP2Q9H175 543 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 CHGBP05060 677 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 GJC1P36383 396 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 TECP42680 631 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 MCAMP43121 646 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 TRIM14Q14142 442 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 NCAPH2Q6IBW4 605 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 MAEAQ7L5Y9 396 aa16.13■□□□□ 0.17
SCARB2-216ENST00000639300 SYMPKQ92797 1274 aaKnown RBP16.13■□□□□ 0.17
SCARB2-216ENST00000639300 ZEB2O60315 1214 aa16.12■□□□□ 0.17
SCARB2-216ENST00000639300 HOOK3Q86VS8 718 aa16.12■□□□□ 0.17
SCARB2-216ENST00000639300 SMYD4Q8IYR2 804 aaPredicted RBP16.12■□□□□ 0.17
SCARB2-216ENST00000639300 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.12■□□□□ 0.17
SCARB2-216ENST00000639300 ADGRB3O60242 1522 aa16.12■□□□□ 0.17
SCARB2-216ENST00000639300 TLDC2A0PJX2 215 aa16.12■□□□□ 0.17
SCARB2-216ENST00000639300 GDAP1L1Q96MZ0 367 aa16.12■□□□□ 0.17
SCARB2-216ENST00000639300 GCOM1H8Y6P7 765 aaPredicted RBP16.12■□□□□ 0.17
SCARB2-216ENST00000639300 MYZAPP0CAP1 466 aa16.12■□□□□ 0.17
SCARB2-216ENST00000639300 PPP1R2P41236 205 aa16.12■□□□□ 0.17
SCARB2-216ENST00000639300 LRRC47Q8N1G4 583 aaKnown RBP16.11■□□□□ 0.17
SCARB2-216ENST00000639300 FRMPD2Q68DX3 1309 aaPredicted RBP16.11■□□□□ 0.17
SCARB2-216ENST00000639300 MED14O60244 1454 aa16.11■□□□□ 0.17
SCARB2-216ENST00000639300 HDXQ7Z353 690 aa16.11■□□□□ 0.17
SCARB2-216ENST00000639300 USP40Q9NVE5 1235 aa16.11■□□□□ 0.17
SCARB2-216ENST00000639300 USP21Q9UK80 565 aa16.11■□□□□ 0.17
SCARB2-216ENST00000639300 ZNF804BA4D1E1 1349 aa16.11■□□□□ 0.17
SCARB2-216ENST00000639300 SCNN1DP51172 638 aa16.11■□□□□ 0.17
SCARB2-216ENST00000639300 PGBD1Q96JS3 809 aa16.11■□□□□ 0.17
SCARB2-216ENST00000639300 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCARB2-216ENST00000639300 PPARDQ03181 441 aa16.11■□□□□ 0.17
SCARB2-216ENST00000639300 SUSD4Q5VX71 490 aa16.11■□□□□ 0.17
SCARB2-216ENST00000639300 CPXCR1Q8N123 301 aa16.11■□□□□ 0.17
SCARB2-216ENST00000639300 OR8K1Q8NGG5 319 aa16.11■□□□□ 0.17
SCARB2-216ENST00000639300 CFBP00751 764 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms