RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 MAP2K7O14733 419 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 ARHGAP6O43182 974 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 SMIM24O75264 130 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 RFC5P40937 340 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 PRPHP41219 470 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 RPS6KA3P51812 740 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 IFT88Q13099 833 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 KCNB1Q14721 858 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 GNPTABQ3T906 1256 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 ZNF569Q5MCW4 686 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 HHATQ5VTY9 493 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 ARHGAP45Q92619 1136 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 CLIC6Q96NY7 704 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 TPCN1Q9ULQ1 816 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 CTAGE9A4FU28 777 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 EIF2S2P20042 333 aaKnown RBP8.04□□□□□ -1.12
NECAP1-213ENST00000638883 PPFIA1Q13136 1202 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 ARMCX5Q6P1M9 558 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 G2E3Q7L622 706 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 SPATS2Q86XZ4 545 aaKnown RBP8.04□□□□□ -1.12
NECAP1-213ENST00000638883 FSIP1Q8NA03 581 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 COG3Q96JB2 828 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 OSBPL5Q9H0X9 879 aaPredicted RBP8.04□□□□□ -1.12
NECAP1-213ENST00000638883 PXDNLA1KZ92 1463 aa8.04□□□□□ -1.12
NECAP1-213ENST00000638883 TCHHQ07283 1943 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 ATP10DQ9P241 1426 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 EME2A4GXA9 379 aaPredicted RBP8.03□□□□□ -1.12
NECAP1-213ENST00000638883 GOLGA6BA6NDN3 693 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 PECAM1P16284 738 aaPredicted RBP8.03□□□□□ -1.12
NECAP1-213ENST00000638883 IRAK1P51617 712 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 MAP3K9P80192 1104 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 MFSD4BQ5TF39 518 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 SLC30A9Q6PML9 568 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 WDR24Q96S15 920 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 TRIM4Q9C037 500 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 KAT14Q9H8E8 782 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 HYPKQ9NX55 129 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 SOS1Q07889 1333 aaPredicted RBP8.03□□□□□ -1.12
NECAP1-213ENST00000638883 MEFVO15553 781 aaPredicted RBP8.03□□□□□ -1.12
NECAP1-213ENST00000638883 ABCD1P33897 745 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 LAMB3Q13751 1172 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 CDC37L1Q7L3B6 337 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 L1RE1Q9UN81 338 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 CCDC175P0C221 793 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 CHMLP26374 656 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 IQCB1Q15051 598 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 SPECC1Q5M775 1068 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 OLFM4Q6UX06 510 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 LRP10Q7Z4F1 713 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 RETREG2Q8NC44 543 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 RIN2Q8WYP3 895 aaPredicted RBP8.03□□□□□ -1.12
NECAP1-213ENST00000638883 MEIS3Q99687 375 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 RMI1Q9H9A7 625 aa8.03□□□□□ -1.12
NECAP1-213ENST00000638883 RBBP6Q7Z6E9 1792 aaKnown RBP8.03□□□□□ -1.12
NECAP1-213ENST00000638883 POM121CA8CG34 1229 aa8.02□□□□□ -1.12
NECAP1-213ENST00000638883 OPA1O60313 960 aa8.02□□□□□ -1.12
NECAP1-213ENST00000638883 POLD1P28340 1107 aa8.02□□□□□ -1.12
NECAP1-213ENST00000638883 FANCCQ00597 558 aa8.02□□□□□ -1.12
NECAP1-213ENST00000638883 DDR1Q08345 913 aa8.02□□□□□ -1.12
NECAP1-213ENST00000638883 GOLGA8FQ08AF8 430 aa8.02□□□□□ -1.12
NECAP1-213ENST00000638883 GOLGA8DPQ0D2H9 430 aa8.02□□□□□ -1.12
NECAP1-213ENST00000638883 ESCO1Q5FWF5 840 aa8.02□□□□□ -1.12
NECAP1-213ENST00000638883 TSC22D3Q99576 134 aa8.02□□□□□ -1.12
NECAP1-213ENST00000638883 BATF3Q9NR55 127 aa8.02□□□□□ -1.12
NECAP1-213ENST00000638883 IGSF5Q9NSI5 407 aa8.02□□□□□ -1.12
NECAP1-213ENST00000638883 ACEP12821 1306 aa8.02□□□□□ -1.13
NECAP1-213ENST00000638883 F6X3S4 739 aa8.02□□□□□ -1.13
NECAP1-213ENST00000638883 CDKL5O76039 1030 aa8.02□□□□□ -1.13
NECAP1-213ENST00000638883 HSP90AA4PQ58FG1 418 aa8.02□□□□□ -1.13
NECAP1-213ENST00000638883 THEMIS2Q5TEJ8 643 aa8.02□□□□□ -1.13
NECAP1-213ENST00000638883 HNRNPLLQ8WVV9 542 aaKnown RBP8.02□□□□□ -1.13
NECAP1-213ENST00000638883 RUFY2Q8WXA3 655 aa8.02□□□□□ -1.13
NECAP1-213ENST00000638883 LTV1Q96GA3 475 aaPredicted RBP8.02□□□□□ -1.13
NECAP1-213ENST00000638883 DESI2Q9BSY9 194 aa8.02□□□□□ -1.13
NECAP1-213ENST00000638883 SBNO1A3KN83 1393 aa8.02□□□□□ -1.13
NECAP1-213ENST00000638883 ATP1A2P50993 1020 aa8.02□□□□□ -1.13
NECAP1-213ENST00000638883 VSNL1P62760 191 aa8.02□□□□□ -1.13
NECAP1-213ENST00000638883 MYO1EQ12965 1108 aa8.02□□□□□ -1.13
NECAP1-213ENST00000638883 ANKRD44Q8N8A2 993 aa8.02□□□□□ -1.13
NECAP1-213ENST00000638883 C3orf20Q8ND61 904 aa8.02□□□□□ -1.13
NECAP1-213ENST00000638883 LMBR1Q8WVP7 490 aa8.02□□□□□ -1.13
NECAP1-213ENST00000638883 SPAG5Q96R06 1193 aa8.02□□□□□ -1.13
NECAP1-213ENST00000638883 CDC23Q9UJX2 597 aa8.02□□□□□ -1.13
NECAP1-213ENST00000638883 CHL1O00533 1208 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 FILIP1LQ4L180 1135 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 RRP12Q5JTH9 1297 aaKnown RBP8.01□□□□□ -1.13
NECAP1-213ENST00000638883 PNMA8AQ86V59 439 aaPredicted RBP8.01□□□□□ -1.13
NECAP1-213ENST00000638883 KCNB2Q92953 911 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 PRDM16Q9HAZ2 1276 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 ANKRD18BA2A2Z9 1011 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 EPB41L2O43491 1005 aaKnown RBP8.01□□□□□ -1.13
NECAP1-213ENST00000638883 ECEL1O95672 775 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 SLC3A2P08195 630 aaKnown RBP8.01□□□□□ -1.13
NECAP1-213ENST00000638883 KIF5BP33176 963 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 MRPL12P52815 198 aaKnown RBP8.01□□□□□ -1.13
NECAP1-213ENST00000638883 ICA1Q05084 483 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 RUFY3Q7L099 469 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 RSRC2Q7L4I2 434 aaKnown RBP8.01□□□□□ -1.13
NECAP1-213ENST00000638883 PPFIBP1Q86W92 1011 aa8.01□□□□□ -1.13
NECAP1-213ENST00000638883 AMOTL1Q8IY63 956 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms