RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 HSPD1P10809 573 aaKnown RBP23.83■■□□□ 1.41
PNKP-219ENST00000626274 SP3Q02447 781 aa23.83■■□□□ 1.41
PNKP-219ENST00000626274 PPARAQ07869 468 aa23.83■■□□□ 1.41
PNKP-219ENST00000626274 PABPC4Q13310 644 aaKnown RBP eCLIP23.83■■□□□ 1.41
PNKP-219ENST00000626274 DGKZQ13574 1117 aa23.83■■□□□ 1.41
PNKP-219ENST00000626274 TREML2Q5T2D2 321 aa23.83■■□□□ 1.41
PNKP-219ENST00000626274 USP17L2Q6R6M4 530 aa23.83■■□□□ 1.41
PNKP-219ENST00000626274 CYP2C8P10632 490 aa23.82■■□□□ 1.4
PNKP-219ENST00000626274 RASA1P20936 1047 aa23.82■■□□□ 1.4
PNKP-219ENST00000626274 ERICH6BQ5W0A0 696 aa23.82■■□□□ 1.4
PNKP-219ENST00000626274 ACER1Q8TDN7 264 aa23.82■■□□□ 1.4
PNKP-219ENST00000626274 ERO1AQ96HE7 468 aa23.82■■□□□ 1.4
PNKP-219ENST00000626274 KIAA1683Q9H0B3 1180 aa23.82■■□□□ 1.4
PNKP-219ENST00000626274 PNMA3Q9UL41 463 aa23.82■■□□□ 1.4
PNKP-219ENST00000626274 GREB1LQ9C091 1923 aaPredicted RBP23.81■■□□□ 1.4
PNKP-219ENST00000626274 USP14P54578 494 aa23.81■■□□□ 1.4
PNKP-219ENST00000626274 PDE4BQ07343 736 aa23.81■■□□□ 1.4
PNKP-219ENST00000626274 CTU1Q7Z7A3 348 aaKnown RBP23.81■■□□□ 1.4
PNKP-219ENST00000626274 ZNF444Q8N0Y2 327 aaPredicted RBP23.81■■□□□ 1.4
PNKP-219ENST00000626274 EMILIN3Q9NT22 766 aa23.81■■□□□ 1.4
PNKP-219ENST00000626274 ADGRA2Q96PE1 1338 aa23.81■■□□□ 1.4
PNKP-219ENST00000626274 FGAP02671 866 aa23.8■■□□□ 1.4
PNKP-219ENST00000626274 ZYXQ15942 572 aaKnown RBP23.8■■□□□ 1.4
PNKP-219ENST00000626274 C17orf99Q6UX52 265 aa23.8■■□□□ 1.4
PNKP-219ENST00000626274 C12orf42Q96LP6 360 aa23.8■■□□□ 1.4
PNKP-219ENST00000626274 CPA4Q9UI42 421 aa23.8■■□□□ 1.4
PNKP-219ENST00000626274 ZMYM6O95789 1325 aa23.8■■□□□ 1.4
PNKP-219ENST00000626274 OSBPP22059 807 aa23.79■■□□□ 1.4
PNKP-219ENST00000626274 ICA1Q05084 483 aa23.79■■□□□ 1.4
PNKP-219ENST00000626274 SMCR8Q8TEV9 937 aaPredicted RBP23.79■■□□□ 1.4
PNKP-219ENST00000626274 KANSL2Q9H9L4 492 aa23.79■■□□□ 1.4
PNKP-219ENST00000626274 ARHGEF10LQ9HCE6 1279 aa23.79■■□□□ 1.4
PNKP-219ENST00000626274 ANAPC4Q9UJX5 808 aa23.79■■□□□ 1.4
PNKP-219ENST00000626274 PRDM1O75626 825 aa23.78■■□□□ 1.4
PNKP-219ENST00000626274 CHMLP26374 656 aa23.78■■□□□ 1.4
PNKP-219ENST00000626274 HOXA7P31268 230 aaPredicted RBP23.78■■□□□ 1.4
PNKP-219ENST00000626274 SKAP1Q86WV1 359 aa23.78■■□□□ 1.4
PNKP-219ENST00000626274 CD99L2Q8TCZ2 262 aa23.78■■□□□ 1.4
PNKP-219ENST00000626274 RUFY2Q8WXA3 655 aa23.78■■□□□ 1.4
PNKP-219ENST00000626274 A0A1W2PRG0 241 aa23.77■■□□□ 1.4
PNKP-219ENST00000626274 CTDSPL2Q05D32 466 aa23.77■■□□□ 1.4
PNKP-219ENST00000626274 CLEC10AQ8IUN9 316 aa23.77■■□□□ 1.4
PNKP-219ENST00000626274 SIAH1Q8IUQ4 282 aa23.77■■□□□ 1.4
PNKP-219ENST00000626274 MCOLN1Q9GZU1 580 aa23.77■■□□□ 1.4
PNKP-219ENST00000626274 ASCC2Q9H1I8 757 aaPredicted RBP23.77■■□□□ 1.4
PNKP-219ENST00000626274 SH2D4AQ9H788 454 aa23.77■■□□□ 1.4
PNKP-219ENST00000626274 RAD50Q92878 1312 aa23.77■■□□□ 1.4
PNKP-219ENST00000626274 IRX3P78415 501 aaPredicted RBP23.76■■□□□ 1.39
PNKP-219ENST00000626274 ARHGEF6Q15052 776 aa23.76■■□□□ 1.39
PNKP-219ENST00000626274 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.76■■□□□ 1.39
PNKP-219ENST00000626274 PPP4R2Q9NY27 417 aa23.76■■□□□ 1.39
PNKP-219ENST00000626274 TMX2Q9Y320 296 aa23.76■■□□□ 1.39
PNKP-219ENST00000626274 MYH4Q9Y623 1939 aa23.75■■□□□ 1.39
PNKP-219ENST00000626274 BCRP11274 1271 aa23.75■■□□□ 1.39
PNKP-219ENST00000626274 EEF2P13639 858 aaKnown RBP23.75■■□□□ 1.39
PNKP-219ENST00000626274 LACTBP83111 547 aaPredicted RBP23.75■■□□□ 1.39
PNKP-219ENST00000626274 KIF22Q14807 665 aa23.75■■□□□ 1.39
PNKP-219ENST00000626274 PKN2Q16513 984 aaKnown RBP23.75■■□□□ 1.39
PNKP-219ENST00000626274 DSCC1Q9BVC3 393 aa23.75■■□□□ 1.39
PNKP-219ENST00000626274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.75■■□□□ 1.39
PNKP-219ENST00000626274 VCAM1P19320 739 aa23.74■■□□□ 1.39
PNKP-219ENST00000626274 GCLCP48506 637 aaPredicted RBP23.74■■□□□ 1.39
PNKP-219ENST00000626274 ATP2B2Q01814 1243 aa23.74■■□□□ 1.39
PNKP-219ENST00000626274 BMP2KLQ5H9B9 411 aa23.74■■□□□ 1.39
PNKP-219ENST00000626274 IL25Q9H293 177 aa23.74■■□□□ 1.39
PNKP-219ENST00000626274 TRIM17Q9Y577 477 aa23.74■■□□□ 1.39
PNKP-219ENST00000626274 LAMA4Q16363 1823 aa23.74■■□□□ 1.39
PNKP-219ENST00000626274 MGAMO43451 1857 aa23.74■■□□□ 1.39
PNKP-219ENST00000626274 USP17L15C9J2P7 530 aa23.73■■□□□ 1.39
PNKP-219ENST00000626274 USP17L13C9JLJ4 530 aa23.73■■□□□ 1.39
PNKP-219ENST00000626274 USP17L11C9JVI0 530 aa23.73■■□□□ 1.39
PNKP-219ENST00000626274 USP17L18D6R9N7 530 aa23.73■■□□□ 1.39
PNKP-219ENST00000626274 USP17L22D6RA61 530 aa23.73■■□□□ 1.39
PNKP-219ENST00000626274 USP17L17D6RBQ6 530 aa23.73■■□□□ 1.39
PNKP-219ENST00000626274 USP17L19D6RCP7 530 aa23.73■■□□□ 1.39
PNKP-219ENST00000626274 USP17L20D6RJB6 530 aa23.73■■□□□ 1.39
PNKP-219ENST00000626274 TSPY3P0CV98 308 aa23.73■■□□□ 1.39
PNKP-219ENST00000626274 TSPY8P0CW00 308 aa23.73■■□□□ 1.39
PNKP-219ENST00000626274 USP17L24Q0WX57 530 aa23.73■■□□□ 1.39
PNKP-219ENST00000626274 OTOP1Q7RTM1 612 aa23.73■■□□□ 1.39
PNKP-219ENST00000626274 NEDD1Q8NHV4 660 aa23.73■■□□□ 1.39
PNKP-219ENST00000626274 EFCC1Q9HA90 598 aa23.73■■□□□ 1.39
PNKP-219ENST00000626274 NYAP2Q9P242 653 aa23.73■■□□□ 1.39
PNKP-219ENST00000626274 ZSWIM8A7E2V4 1837 aa23.73■■□□□ 1.39
PNKP-219ENST00000626274 IGKV6D-41A0A0C4DH26 115 aa23.72■■□□□ 1.39
PNKP-219ENST00000626274 ORC4O43929 436 aa23.72■■□□□ 1.39
PNKP-219ENST00000626274 FGRP09769 529 aa23.72■■□□□ 1.39
PNKP-219ENST00000626274 HAND2P61296 217 aa23.72■■□□□ 1.39
PNKP-219ENST00000626274 TFAP4Q01664 338 aa23.72■■□□□ 1.39
PNKP-219ENST00000626274 FAM47AQ5JRC9 791 aa23.72■■□□□ 1.39
PNKP-219ENST00000626274 ANKRD13CQ8N6S4 541 aa23.72■■□□□ 1.39
PNKP-219ENST00000626274 LPAR1Q92633 364 aa23.72■■□□□ 1.39
PNKP-219ENST00000626274 P2RX7Q99572 595 aaKnown RBP23.72■■□□□ 1.39
PNKP-219ENST00000626274 VCPKMTQ9H867 229 aa23.72■■□□□ 1.39
PNKP-219ENST00000626274 INCENPQ9NQS7 918 aa23.72■■□□□ 1.39
PNKP-219ENST00000626274 CTNNA3Q9UI47 895 aa23.72■■□□□ 1.39
PNKP-219ENST00000626274 PLIN4Q96Q06 1357 aa23.72■■□□□ 1.39
PNKP-219ENST00000626274 ZNF213O14771 459 aa23.71■■□□□ 1.39
PNKP-219ENST00000626274 CAP1Q01518 475 aa23.71■■□□□ 1.39
PNKP-219ENST00000626274 CATSPERGQ6ZRH7 1159 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms