RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 SFPQP23246 707 aaKnown RBP eCLIP13.21□□□□□ -0.3
CHD2-205ENST00000625662 YWHAEP62258 255 aaKnown RBP13.21□□□□□ -0.3
CHD2-205ENST00000625662 KIF4BQ2VIQ3 1234 aa13.21□□□□□ -0.3
CHD2-205ENST00000625662 ZNF354CQ86Y25 554 aa13.21□□□□□ -0.3
CHD2-205ENST00000625662 KIF2AO00139 706 aaPredicted RBP13.2□□□□□ -0.3
CHD2-205ENST00000625662 EZRP15311 586 aaKnown RBP13.2□□□□□ -0.3
CHD2-205ENST00000625662 PHKA1P46020 1223 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 TBC1D10BQ4KMP7 808 aaPredicted RBP13.2□□□□□ -0.3
CHD2-205ENST00000625662 MFSD14CQ5VZR4 134 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 NOX5Q96PH1 765 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 IQSEC2Q5JU85 1478 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 SLC27A2O14975 620 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 KCNQ2O43526 872 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 XPOTO43592 962 aaKnown RBP13.2□□□□□ -0.3
CHD2-205ENST00000625662 ABCD1P33897 745 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 SREBF2Q12772 1141 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 NECAB1Q8N987 351 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 RETREG2Q8NC44 543 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 MTIF3Q9H2K0 278 aaKnown RBP13.2□□□□□ -0.3
CHD2-205ENST00000625662 PNMA6EA0A0J9YXQ4 647 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 H7C1W4 665 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 CALUO43852 315 aaPredicted RBP13.2□□□□□ -0.3
CHD2-205ENST00000625662 CCNT1O60563 726 aaKnown RBP13.2□□□□□ -0.3
CHD2-205ENST00000625662 ATF7P17544 494 aaPredicted RBP13.2□□□□□ -0.3
CHD2-205ENST00000625662 UBE2HP62256 183 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 NCAPH2Q6IBW4 605 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 PSTPIP2Q9H939 334 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 LRFN2Q9ULH4 789 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 NOP2P46087 812 aaKnown RBP13.2□□□□□ -0.3
CHD2-205ENST00000625662 CRKP46108 304 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 EZH2Q15910 746 aaKnown RBP13.2□□□□□ -0.3
CHD2-205ENST00000625662 TMEM179Q6ZVK1 233 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 ABI1Q8IZP0 508 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 MARCH10Q8NA82 808 aaPredicted RBP13.2□□□□□ -0.3
CHD2-205ENST00000625662 TEKT3Q9BXF9 490 aa13.2□□□□□ -0.3
CHD2-205ENST00000625662 ZNF277Q9NRM2 450 aaPredicted RBP13.2□□□□□ -0.3
CHD2-205ENST00000625662 EPB41P11171 864 aaKnown RBP13.19□□□□□ -0.3
CHD2-205ENST00000625662 PNMA1Q8ND90 353 aa13.19□□□□□ -0.3
CHD2-205ENST00000625662 TTLL11Q8NHH1 800 aa13.19□□□□□ -0.3
CHD2-205ENST00000625662 USP25Q9UHP3 1055 aa13.19□□□□□ -0.3
CHD2-205ENST00000625662 BMP3P12645 472 aa13.19□□□□□ -0.3
CHD2-205ENST00000625662 LMNB1P20700 586 aa13.19□□□□□ -0.3
CHD2-205ENST00000625662 SLC17A8Q8NDX2 589 aa13.19□□□□□ -0.3
CHD2-205ENST00000625662 PANK2Q9BZ23 570 aa13.19□□□□□ -0.3
CHD2-205ENST00000625662 KIDINS220Q9ULH0 1771 aa13.19□□□□□ -0.3
CHD2-205ENST00000625662 USP17L5A8MUK1 530 aa13.19□□□□□ -0.3
CHD2-205ENST00000625662 AOC3Q16853 763 aa13.19□□□□□ -0.3
CHD2-205ENST00000625662 DEPTORQ8TB45 409 aa13.19□□□□□ -0.3
CHD2-205ENST00000625662 E9PCH4 1651 aa13.19□□□□□ -0.3
CHD2-205ENST00000625662 UBXN2AP68543 259 aa13.19□□□□□ -0.3
CHD2-205ENST00000625662 PROSER3Q2NL68 480 aa13.19□□□□□ -0.3
CHD2-205ENST00000625662 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.19□□□□□ -0.3
CHD2-205ENST00000625662 YARSP54577 528 aaKnown RBP13.18□□□□□ -0.3
CHD2-205ENST00000625662 BIRC3Q13489 604 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 CAMK4Q16566 473 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 CALCRLQ16602 461 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 USP17L2Q6R6M4 530 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 TFIP11Q9UBB9 837 aaKnown RBP13.18□□□□□ -0.3
CHD2-205ENST00000625662 MRVI1Q9Y6F6 885 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 ERLIN1O75477 346 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 CCND2P30279 289 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 CNNM4Q6P4Q7 775 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 TCEANC2Q96MN5 208 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 SGSM2O43147 1006 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 RLBP1P12271 317 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 SMC1AQ14683 1233 aaKnown RBP13.18□□□□□ -0.3
CHD2-205ENST00000625662 FAM47AQ5JRC9 791 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 CCDC129Q6ZRS4 1044 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 PAIP2Q9BPZ3 127 aaKnown RBP13.18□□□□□ -0.3
CHD2-205ENST00000625662 MMRN2Q9H8L6 949 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 LRWD1Q9UFC0 647 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 MED23Q9ULK4 1368 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 AFMP43652 599 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 KIFAP3Q92845 792 aa13.18□□□□□ -0.3
CHD2-205ENST00000625662 INTS4Q96HW7 963 aaKnown RBP13.18□□□□□ -0.3
CHD2-205ENST00000625662 TRIM28Q13263 835 aaKnown RBP13.17□□□□□ -0.3
CHD2-205ENST00000625662 ZNF654Q8IZM8 581 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 EHBP1Q8NDI1 1231 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 ATP6V0A1Q93050 837 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 CD2APQ9Y5K6 639 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 TECPR2O15040 1411 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 SMCO2A6NFE2 343 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 N4BP3O15049 544 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 GNAT1P11488 350 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 STAT2P52630 851 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 PPP2R5AQ15172 486 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 TTC38Q5R3I4 469 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 PIK3AP1Q6ZUJ8 805 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 ZHX1Q9UKY1 873 aaPredicted RBP13.17□□□□□ -0.3
CHD2-205ENST00000625662 NEMFO60524 1076 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 RBM10P98175 930 aaKnown RBP13.17□□□□□ -0.3
CHD2-205ENST00000625662 CCDC112Q8NEF3 446 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 DHX58Q96C10 678 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 CD209Q9NNX6 404 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 COMMD10Q9Y6G5 202 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 PREX1Q8TCU6 1659 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 GSDMDP57764 484 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 PLCD3Q8N3E9 789 aa13.17□□□□□ -0.3
CHD2-205ENST00000625662 ZFYVE28Q9HCC9 887 aa13.16□□□□□ -0.3
CHD2-205ENST00000625662 KLRF2D3W0D1 207 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms