RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 PANX2Q96RD6 677 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 UBXN6Q9BZV1 441 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 NOVA2Q9UNW9 492 aaKnown RBP15.06■□□□□ 0
PPP4R3B-205ENST00000616288 SLC12A7Q9Y666 1083 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 IFIT1P09914 478 aaKnown RBP15.06■□□□□ 0
PPP4R3B-205ENST00000616288 SLC8A3P57103 927 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 TRIM14Q14142 442 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 CNKSR2Q8WXI2 1034 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 NOD2Q9HC29 1040 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 GJB4Q9NTQ9 266 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 CCDC189A1A4V9 331 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 H0Y3Z8 333 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 ZFYP08048 801 aaPredicted RBP15.06■□□□□ 0
PPP4R3B-205ENST00000616288 CUL3Q13618 768 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 MSANTD4Q8NCY6 345 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 PLA2R1Q13018 1463 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 GNAT1P11488 350 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 CYP27A1Q02318 531 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 SLMAPQ14BN4 828 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 VPS37DQ86XT2 251 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 B4GALNT2Q8NHY0 566 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 NCOA7Q8NI08 942 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 IFIH1Q9BYX4 1025 aaKnown RBP15.06■□□□□ 0
PPP4R3B-205ENST00000616288 USP44Q9H0E7 712 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 ERVK-7P63135 1459 aa15.06■□□□□ 0
PPP4R3B-205ENST00000616288 RIMS2Q9UQ26 1411 aa15.05■□□□□ 0
PPP4R3B-205ENST00000616288 NUP153P49790 1475 aaKnown RBP15.05■□□□□ 0
PPP4R3B-205ENST00000616288 IQSEC2Q5JU85 1478 aa15.05■□□□□ 0
PPP4R3B-205ENST00000616288 RAD9BQ6WBX8 426 aa15.05■□□□□ 0
PPP4R3B-205ENST00000616288 VCPKMTQ9H867 229 aa15.05■□□□□ 0
PPP4R3B-205ENST00000616288 IFIT3O14879 490 aaKnown RBP15.05■□□□□ -0
PPP4R3B-205ENST00000616288 MYBL2P10244 700 aa15.05■□□□□ -0
PPP4R3B-205ENST00000616288 MAGEA1P43355 309 aa15.05■□□□□ -0
PPP4R3B-205ENST00000616288 TOB2Q14106 344 aaPredicted RBP15.05■□□□□ -0
PPP4R3B-205ENST00000616288 ZFYVE27Q5T4F4 411 aa15.05■□□□□ -0
PPP4R3B-205ENST00000616288 TC2NQ8N9U0 490 aa15.05■□□□□ -0
PPP4R3B-205ENST00000616288 PHKBQ93100 1093 aa15.05■□□□□ -0
PPP4R3B-205ENST00000616288 MAP3K2Q9Y2U5 619 aa15.05■□□□□ -0
PPP4R3B-205ENST00000616288 LRRIQ1Q96JM4 1722 aa15.05■□□□□ -0
PPP4R3B-205ENST00000616288 RASSF10A6NK89 507 aa15.05■□□□□ -0
PPP4R3B-205ENST00000616288 KLHDC4Q8TBB5 520 aa15.05■□□□□ -0
PPP4R3B-205ENST00000616288 STMN2Q93045 179 aa15.05■□□□□ -0
PPP4R3B-205ENST00000616288 ARL8AQ96BM9 186 aa15.05■□□□□ -0
PPP4R3B-205ENST00000616288 STAMBPL1Q96FJ0 436 aa15.05■□□□□ -0
PPP4R3B-205ENST00000616288 TSGA10Q9BZW7 698 aa15.05■□□□□ -0
PPP4R3B-205ENST00000616288 PAPOLBQ9NRJ5 636 aaKnown RBP15.05■□□□□ -0
PPP4R3B-205ENST00000616288 GNAT3A8MTJ3 354 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 BUB1O43683 1085 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 ATP1A1P05023 1023 aaKnown RBP15.04■□□□□ -0
PPP4R3B-205ENST00000616288 ADCY2Q08462 1091 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 TYW1BQ6NUM6 668 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 HOOK2Q96ED9 719 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 KRT12Q99456 494 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 ELAC2Q9BQ52 826 aaKnown RBP15.04■□□□□ -0
PPP4R3B-205ENST00000616288 GGT7Q9UJ14 662 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 MCM8Q9UJA3 840 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 A0A1W2PP64 1363 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 ZNF185O15231 689 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 MFAP3LO75121 409 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 NDUFA10O95299 355 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 ANP32DO95626 131 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 KIAA0753Q2KHM9 967 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 EMBQ6PCB8 327 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 RNPC3Q96LT9 517 aaKnown RBP15.04■□□□□ -0
PPP4R3B-205ENST00000616288 HYOU1Q9Y4L1 999 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 CHL1O00533 1208 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 GIGYF1O75420 1035 aaPredicted RBP15.04■□□□□ -0
PPP4R3B-205ENST00000616288 CTCFP49711 727 aaPredicted RBP15.04■□□□□ -0
PPP4R3B-205ENST00000616288 HDGFP51858 240 aaKnown RBP15.04■□□□□ -0
PPP4R3B-205ENST00000616288 TTF1Q15361 905 aaPredicted RBP15.04■□□□□ -0
PPP4R3B-205ENST00000616288 CCNI2Q6ZMN8 369 aaPredicted RBP15.04■□□□□ -0
PPP4R3B-205ENST00000616288 CCHCR1Q8TD31 782 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 ZHX3Q9H4I2 956 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 PIK3R4Q99570 1358 aa15.04■□□□□ -0
PPP4R3B-205ENST00000616288 LONP2Q86WA8 852 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 CUL5Q93034 780 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 BPIFA3Q9BQP9 254 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 SCOCQ9UIL1 159 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 ZBTB43O43298 467 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 CNGA1P29973 690 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 KRT40Q6A162 431 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 PI4K2BQ8TCG2 481 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 SSH3Q8TE77 659 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.03■□□□□ -0
PPP4R3B-205ENST00000616288 TRIM10Q9UDY6 481 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 SH3BP1Q9Y3L3 701 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 L3MBTL1Q9Y468 752 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 A0A1W2PRG0 241 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 PPARAQ07869 468 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 TMEM67Q5HYA8 995 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 ZNF589Q86UQ0 364 aaPredicted RBP15.03■□□□□ -0
PPP4R3B-205ENST00000616288 SYCP3Q8IZU3 236 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 ANKRD42Q8N9B4 389 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 BLZF1Q9H2G9 400 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 VCX3BQ9H321 246 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 ATP6V0A4Q9HBG4 840 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 VCX3AQ9NNX9 186 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 TRPC6Q9Y210 931 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 PSMA7O14818 248 aa15.03■□□□□ -0
PPP4R3B-205ENST00000616288 CEP104O60308 925 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms