RNA–Protein interactions for RNA: ENST00000614971.4

LTN1-207, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,756 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-207ENST00000614971 TRIM31Q9BZY9 425 aa4.28□□□□□ -1.73
LTN1-207ENST00000614971 TDRD3Q9H7E2 651 aaKnown RBP4.28□□□□□ -1.73
LTN1-207ENST00000614971 SLC39A2Q9NP94 309 aa4.28□□□□□ -1.73
LTN1-207ENST00000614971 ZKSCAN5Q9Y2L8 839 aa4.28□□□□□ -1.73
LTN1-207ENST00000614971 GTF2F1P35269 517 aaKnown RBP eCLIP4.27□□□□□ -1.73
LTN1-207ENST00000614971 KRT9P35527 623 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 MRPL12P52815 198 aaKnown RBP4.27□□□□□ -1.73
LTN1-207ENST00000614971 UBE4AQ14139 1066 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 CERKLQ49MI3 558 aaPredicted RBP4.27□□□□□ -1.73
LTN1-207ENST00000614971 RNF169Q8NCN4 708 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 ERMNQ8TAM6 284 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 CCDC42Q96M95 316 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 ADCY10Q96PN6 1610 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 PLXNC1O60486 1568 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 PPEF1O14829 653 aaPredicted RBP4.27□□□□□ -1.73
LTN1-207ENST00000614971 POLA2Q14181 598 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 CALCRLQ16602 461 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 BRAPQ7Z569 592 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 ADAT2Q7Z6V5 191 aaKnown RBP4.27□□□□□ -1.73
LTN1-207ENST00000614971 IGSF22Q8N9C0 903 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 MARCH10Q8NA82 808 aaPredicted RBP4.27□□□□□ -1.73
LTN1-207ENST00000614971 XPO4Q9C0E2 1151 aaKnown RBP4.27□□□□□ -1.73
LTN1-207ENST00000614971 ACBD3Q9H3P7 528 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 ZNF277Q9NRM2 450 aaPredicted RBP4.27□□□□□ -1.73
LTN1-207ENST00000614971 SERPINA10Q9UK55 444 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 ADCY9O60503 1353 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 AATKQ6ZMQ8 1374 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 USO1O60763 962 aaKnown RBP4.27□□□□□ -1.73
LTN1-207ENST00000614971 FLOT1O75955 427 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 U2AF2P26368 475 aaKnown RBP eCLIP4.27□□□□□ -1.733e-6■■■■■ 27
LTN1-207ENST00000614971 IGBP1P78318 339 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 PLCB3Q01970 1234 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 MYL5Q02045 173 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 ICA1Q05084 483 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 ARHGAP44Q17R89 818 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 RILPL1Q5EBL4 403 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 ZMYM1Q5SVZ6 1142 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 VPS36Q86VN1 386 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 CCDC25Q86WR0 208 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 ZNF354CQ86Y25 554 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 TAB3Q8N5C8 712 aaPredicted RBP4.27□□□□□ -1.73
LTN1-207ENST00000614971 SH3RF3Q8TEJ3 882 aaPredicted RBP4.27□□□□□ -1.73
LTN1-207ENST00000614971 NOC4LQ9BVI4 516 aaKnown RBP4.27□□□□□ -1.73
LTN1-207ENST00000614971 ZBTB12Q9Y330 459 aaPredicted RBP4.27□□□□□ -1.73
LTN1-207ENST00000614971 GCNT3O95395 438 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 PAFAH1B1P43034 410 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 IFFO1Q0D2I5 559 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 AOC3Q16853 763 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 DEFB132Q7Z7B7 95 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 IFT81Q8WYA0 676 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 SUGCTQ9HAC7 445 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 BABAM1Q9NWV8 329 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 ALKQ9UM73 1620 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 SRCAPQ6ZRS2 3230 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 UBE2Q2LH0YL09 131 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 KRT13P13646 458 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 KRT5P13647 590 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 CYP2J2P51589 502 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 FANCCQ00597 558 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 NFIXQ14938 502 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 POSTNQ15063 836 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 TBC1D10CQ8IV04 446 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 SLF1Q9BQI6 1058 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 DSCC1Q9BVC3 393 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 FANCLQ9NW38 375 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 PCDHA1Q9Y5I3 950 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 PTCH1Q13635 1447 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 GLI2P10070 1586 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 ADD2P35612 726 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 KANK3Q6NY19 840 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 GADL1Q6ZQY3 521 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 SV2BQ7L1I2 683 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 MAATS1Q7Z4T9 603 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 MYCT1Q8N699 235 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 EPSTI1Q96J88 318 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 WDR70Q9NW82 654 aa4.27□□□□□ -1.73
LTN1-207ENST00000614971 ELP1O95163 1332 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 SFI1A8K8P3 1242 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 CYP19A1P11511 503 aaPredicted RBP4.26□□□□□ -1.73
LTN1-207ENST00000614971 ADCY7P51828 1080 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 CETN1Q12798 172 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 NONOQ15233 471 aaKnown RBP eCLIP4.26□□□□□ -1.73
LTN1-207ENST00000614971 DPCR1Q3MIW9 517 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 HS2ST1Q7LGA3 356 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 NOSTRINQ8IVI9 506 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 METTL13Q8N6R0 699 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 GJA10Q969M2 543 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 CCDC127Q96BQ5 260 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 PIGSQ96S52 555 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 MINPP1Q9UNW1 487 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 AK9Q5TCS8 1911 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 RNF17Q9BXT8 1623 aaKnown RBP4.26□□□□□ -1.73
LTN1-207ENST00000614971 TLDC2A0PJX2 215 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 KLRK1P26718 216 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 NF2P35240 595 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 ARID5BQ14865 1188 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 TMEM87AQ8NBN3 555 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 NSUN7Q8NE18 718 aaKnown RBP4.26□□□□□ -1.73
LTN1-207ENST00000614971 DYDC1Q8WWB3 177 aa4.26□□□□□ -1.73
LTN1-207ENST00000614971 PSTPIP2Q9H939 334 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms