RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 SHISA8B8ZZ34 492 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 ERC2O15083 957 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 MYCP01106 439 aaPredicted RBP6.32□□□□□ -1.4
CCL16-206ENST00000613642 TSPY4P0CV99 314 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 TSPY10P0CW01 314 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 ZFXP17010 805 aaPredicted RBP6.32□□□□□ -1.4
CCL16-206ENST00000613642 RAB27AP51159 221 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 GNPTABQ3T906 1256 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.32□□□□□ -1.4
CCL16-206ENST00000613642 C4orf17Q53FE4 359 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 TTC39BQ5VTQ0 682 aaPredicted RBP6.32□□□□□ -1.4
CCL16-206ENST00000613642 SDE2Q6IQ49 451 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 TMEM110Q86TL2 294 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 PHTF2Q8N3S3 785 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 AFAP1Q8N556 730 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 SMYD1Q8NB12 490 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 FBXO18Q8NFZ0 1043 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 GAS2L2Q8NHY3 880 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 FAM81AQ8TBF8 368 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 BICD2Q8TD16 824 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 CHMP7Q8WUX9 453 aaPredicted RBP6.32□□□□□ -1.4
CCL16-206ENST00000613642 ZFPM2Q8WW38 1151 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 TBC1D5Q92609 795 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 STK31Q9BXU1 1019 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 CAPS2Q9BXY5 557 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 ZNF304Q9HCX3 659 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 ZNF446Q9NWS9 450 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 MYO6Q9UM54 1294 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 SQORQ9Y6N5 450 aa6.32□□□□□ -1.4
CCL16-206ENST00000613642 UHRF1BP1LA0JNW5 1464 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 DYTNA2CJ06 578 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 KRBA1A5PL33 1030 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.31□□□□□ -1.4
CCL16-206ENST00000613642 VIL1P09327 827 aaKnown RBP6.31□□□□□ -1.4
CCL16-206ENST00000613642 EIF4BP23588 611 aaKnown RBP6.31□□□□□ -1.4
CCL16-206ENST00000613642 RRM1P23921 792 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 MPP3Q13368 585 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 MYBPC3Q14896 1274 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 RCN1Q15293 331 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 PLEKHG6Q3KR16 790 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 SAPCD2Q86UD0 394 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 C11orf74Q86VG3 221 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 TXNDC2Q86VQ3 553 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 MFN1Q8IWA4 741 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 SLC43A3Q8NBI5 491 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 EDARADDQ8WWZ3 215 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 EZH1Q92800 747 aaPredicted RBP6.31□□□□□ -1.4
CCL16-206ENST00000613642 KCNN1Q92952 543 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 KIF1BPQ96EK5 621 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 DDX11Q96FC9 970 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 NEK1Q96PY6 1258 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 XPO4Q9C0E2 1151 aaKnown RBP6.31□□□□□ -1.4
CCL16-206ENST00000613642 CCDC68Q9H2F9 335 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 NDFIP2Q9NV92 336 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 PSD3Q9NYI0 1048 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 UBAP1Q9NZ09 502 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 RGL1Q9NZL6 768 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 POLG2Q9UHN1 485 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 G3BP2Q9UN86 482 aaKnown RBP6.31□□□□□ -1.4
CCL16-206ENST00000613642 SLC45A1Q9Y2W3 748 aa6.31□□□□□ -1.4
CCL16-206ENST00000613642 TMEM238LA0A1B0GVL6 79 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 GTPBP10A4D1E9 387 aaKnown RBP6.3□□□□□ -1.4
CCL16-206ENST00000613642 IQCA1LA6NCM1 817 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 CLASP2O75122 1294 aaKnown RBP6.3□□□□□ -1.4
CCL16-206ENST00000613642 RPN1P04843 607 aaKnown RBP6.3□□□□□ -1.4
CCL16-206ENST00000613642 HOXB4P17483 251 aaPredicted RBP6.3□□□□□ -1.4
CCL16-206ENST00000613642 MSX1P28360 303 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 KIF5BP33176 963 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 MATR3P43243 847 aaKnown RBP eCLIP6.3□□□□□ -1.4
CCL16-206ENST00000613642 HDAC4P56524 1084 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 ZBED6P86452 979 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 PABPC4Q13310 644 aaKnown RBP eCLIP6.3□□□□□ -1.4
CCL16-206ENST00000613642 UBE4AQ14139 1066 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 SLFNL1Q499Z3 407 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 BOLA3Q53S33 107 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 CCDC93Q567U6 631 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 ESCO1Q5FWF5 840 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 GNASQ5JWF2 1037 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 CFAP58Q5T655 872 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 CCBE1Q6UXH8 406 aaPredicted RBP6.3□□□□□ -1.4
CCL16-206ENST00000613642 NEK10Q6ZWH5 1172 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 ALYREFQ86V81 257 aaKnown RBP6.3□□□□□ -1.4
CCL16-206ENST00000613642 CHPFQ8IZ52 775 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 C3orf20Q8ND61 904 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 SUN5Q8TC36 379 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 GPT2Q8TD30 523 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 ACMSDQ8TDX5 336 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 LZICQ8WZA0 190 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 ERP27Q96DN0 273 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 TBC1D31Q96DN5 1066 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 TSGA10Q9BZW7 698 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 SLC7A5P2Q9GIP4 190 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 TCF7L2Q9NQB0 619 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 KRT82Q9NSB4 513 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 IL20Q9NYY1 176 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 ANKIB1Q9P2G1 1089 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 ATXN7L1Q9ULK2 861 aaPredicted RBP6.3□□□□□ -1.4
CCL16-206ENST00000613642 SSX2IPQ9Y2D8 614 aa6.3□□□□□ -1.4
CCL16-206ENST00000613642 WRNQ14191 1432 aaPredicted RBP eCLIP6.3□□□□□ -1.4
CCL16-206ENST00000613642 GOLGA6L9A6NEM1 432 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms