RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 ZBTB21Q9ULJ3 1066 aa15.41■□□□□ 0.06
GGA3-220ENST00000613421 ADGRL3Q9HAR2 1447 aa15.4■□□□□ 0.06
GGA3-220ENST00000613421 IGSF3O75054 1194 aa15.4■□□□□ 0.06
GGA3-220ENST00000613421 SLC1A4P43007 532 aa15.4■□□□□ 0.06
GGA3-220ENST00000613421 ADKP55263 362 aaKnown RBP15.4■□□□□ 0.06
GGA3-220ENST00000613421 DYMQ7RTS9 669 aa15.4■□□□□ 0.06
GGA3-220ENST00000613421 NBPF11Q86T75 865 aa15.4■□□□□ 0.06
GGA3-220ENST00000613421 SLC39A14Q15043 492 aa15.4■□□□□ 0.06
GGA3-220ENST00000613421 DDX12PQ92771 950 aa15.4■□□□□ 0.06
GGA3-220ENST00000613421 ZBTB9Q96C00 473 aa15.4■□□□□ 0.06
GGA3-220ENST00000613421 BCL2L12Q9HB09 334 aa15.4■□□□□ 0.06
GGA3-220ENST00000613421 POLR3EQ9NVU0 708 aa15.4■□□□□ 0.06
GGA3-220ENST00000613421 WWC3Q9ULE0 1092 aa15.4■□□□□ 0.06
GGA3-220ENST00000613421 POLR1AO95602 1720 aaPredicted RBP15.4■□□□□ 0.06
GGA3-220ENST00000613421 DDAH1O94760 285 aa15.4■□□□□ 0.06
GGA3-220ENST00000613421 ADD2P35612 726 aa15.4■□□□□ 0.06
GGA3-220ENST00000613421 MAPK8IP2Q13387 824 aaPredicted RBP15.4■□□□□ 0.06
GGA3-220ENST00000613421 DPP8Q6V1X1 898 aaPredicted RBP15.4■□□□□ 0.06
GGA3-220ENST00000613421 RGS22Q8NE09 1264 aa15.4■□□□□ 0.06
GGA3-220ENST00000613421 SECISBP2LQ93073 1101 aaKnown RBP15.4■□□□□ 0.06
GGA3-220ENST00000613421 IMPG2Q9BZV3 1241 aa15.4■□□□□ 0.06
GGA3-220ENST00000613421 OSBP2Q969R2 916 aa15.39■□□□□ 0.05
GGA3-220ENST00000613421 CCDC51Q96ER9 411 aa15.39■□□□□ 0.05
GGA3-220ENST00000613421 SMCO2A6NFE2 343 aa15.39■□□□□ 0.05
GGA3-220ENST00000613421 SCG2P13521 617 aa15.39■□□□□ 0.05
GGA3-220ENST00000613421 UBE4AQ14139 1066 aa15.39■□□□□ 0.05
GGA3-220ENST00000613421 SLF1Q9BQI6 1058 aa15.39■□□□□ 0.05
GGA3-220ENST00000613421 PPRC1Q5VV67 1664 aaKnown RBP15.39■□□□□ 0.05
GGA3-220ENST00000613421 LOC102724428A0A0B4J2F2 783 aa15.39■□□□□ 0.05
GGA3-220ENST00000613421 ACTN2P35609 894 aa15.39■□□□□ 0.05
GGA3-220ENST00000613421 SIK1P57059 783 aa15.39■□□□□ 0.05
GGA3-220ENST00000613421 ZNF827Q17R98 1081 aa15.39■□□□□ 0.05
GGA3-220ENST00000613421 LONRF3Q496Y0 759 aa15.39■□□□□ 0.05
GGA3-220ENST00000613421 PNMA1Q8ND90 353 aa15.39■□□□□ 0.05
GGA3-220ENST00000613421 ARHGEF10LQ9HCE6 1279 aa15.39■□□□□ 0.05
GGA3-220ENST00000613421 PCP11498 1178 aaKnown RBP15.39■□□□□ 0.05
GGA3-220ENST00000613421 HERC4Q5GLZ8 1057 aaPredicted RBP15.39■□□□□ 0.05
GGA3-220ENST00000613421 ATRIPQ8WXE1 791 aa15.39■□□□□ 0.05
GGA3-220ENST00000613421 SYNCQ9H7C4 482 aa15.39■□□□□ 0.05
GGA3-220ENST00000613421 FANCLQ9NW38 375 aa15.39■□□□□ 0.05
GGA3-220ENST00000613421 CHMP2AO43633 222 aa15.38■□□□□ 0.05
GGA3-220ENST00000613421 CALUO43852 315 aaPredicted RBP15.38■□□□□ 0.05
GGA3-220ENST00000613421 CRKLP46109 303 aaKnown RBP15.38■□□□□ 0.05
GGA3-220ENST00000613421 NCAPH2Q6IBW4 605 aa15.38■□□□□ 0.05
GGA3-220ENST00000613421 RCOR1Q9UKL0 485 aa15.38■□□□□ 0.05
GGA3-220ENST00000613421 PPP6R2O75170 966 aa15.38■□□□□ 0.05
GGA3-220ENST00000613421 SMAP1Q8IYB5 467 aaPredicted RBP15.38■□□□□ 0.05
GGA3-220ENST00000613421 ATP10DQ9P241 1426 aa15.38■□□□□ 0.05
GGA3-220ENST00000613421 TCHPQ9BT92 498 aa15.38■□□□□ 0.05
GGA3-220ENST00000613421 PYCARDQ9ULZ3 195 aa15.38■□□□□ 0.05
GGA3-220ENST00000613421 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.38■□□□□ 0.056e-6■□□□□ 10.8
GGA3-220ENST00000613421 STK24Q9Y6E0 443 aa15.38■□□□□ 0.05
GGA3-220ENST00000613421 ASIC2Q16515 512 aa15.38■□□□□ 0.05
GGA3-220ENST00000613421 SLC9C1Q4G0N8 1177 aa15.38■□□□□ 0.05
GGA3-220ENST00000613421 MFSD14BQ5SR56 506 aa15.38■□□□□ 0.05
GGA3-220ENST00000613421 PI16Q6UXB8 463 aa15.38■□□□□ 0.05
GGA3-220ENST00000613421 PUS7LQ9H0K6 701 aaKnown RBP15.38■□□□□ 0.05
GGA3-220ENST00000613421 IGKV5-2P06315 115 aa15.37■□□□□ 0.05
GGA3-220ENST00000613421 CDC25BP30305 580 aa15.37■□□□□ 0.05
GGA3-220ENST00000613421 PKD2L1Q9P0L9 805 aa15.37■□□□□ 0.05
GGA3-220ENST00000613421 CFAP58Q5T655 872 aa15.37■□□□□ 0.05
GGA3-220ENST00000613421 RBM26Q5T8P6 1007 aaKnown RBP15.37■□□□□ 0.05
GGA3-220ENST00000613421 CCDC84Q86UT8 332 aaPredicted RBP15.37■□□□□ 0.05
GGA3-220ENST00000613421 NLRP10Q86W26 655 aa15.37■□□□□ 0.05
GGA3-220ENST00000613421 JDP2Q8WYK2 163 aa15.37■□□□□ 0.05
GGA3-220ENST00000613421 NOX5Q96PH1 765 aa15.37■□□□□ 0.05
GGA3-220ENST00000613421 CAMSAP1Q5T5Y3 1602 aa15.37■□□□□ 0.05
GGA3-220ENST00000613421 DCAF8L1A6NGE4 600 aa15.37■□□□□ 0.05
GGA3-220ENST00000613421 KCNJ18B7U540 433 aa15.37■□□□□ 0.05
GGA3-220ENST00000613421 FMNL1O95466 1100 aaPredicted RBP15.37■□□□□ 0.05
GGA3-220ENST00000613421 RESTQ13127 1097 aa15.37■□□□□ 0.05
GGA3-220ENST00000613421 KCNJ12Q14500 433 aa15.37■□□□□ 0.05
GGA3-220ENST00000613421 TMEM87AQ8NBN3 555 aa15.37■□□□□ 0.05
GGA3-220ENST00000613421 FTOQ9C0B1 505 aaKnown RBP eCLIP15.37■□□□□ 0.05
GGA3-220ENST00000613421 BIN2Q9UBW5 565 aaPredicted RBP15.37■□□□□ 0.05
GGA3-220ENST00000613421 H7C1W4 665 aa15.37■□□□□ 0.05
GGA3-220ENST00000613421 KIF23Q02241 960 aaPredicted RBP15.37■□□□□ 0.05
GGA3-220ENST00000613421 TSC1Q92574 1164 aa15.37■□□□□ 0.05
GGA3-220ENST00000613421 FOXP1Q9H334 677 aaPredicted RBP15.37■□□□□ 0.05
GGA3-220ENST00000613421 MORC3Q14149 939 aa15.36■□□□□ 0.05
GGA3-220ENST00000613421 NBPF14Q5TI25 921 aa15.36■□□□□ 0.05
GGA3-220ENST00000613421 C8orf74Q6P047 294 aa15.36■□□□□ 0.05
GGA3-220ENST00000613421 GIMAP7Q8NHV1 300 aa15.36■□□□□ 0.05
GGA3-220ENST00000613421 FAM76AQ8TAV0 307 aa15.36■□□□□ 0.05
GGA3-220ENST00000613421 STMN4Q9H169 189 aaPredicted RBP15.36■□□□□ 0.05
GGA3-220ENST00000613421 MAGEA1P43355 309 aa15.36■□□□□ 0.05
GGA3-220ENST00000613421 ARFGAP2Q8N6H7 521 aa15.36■□□□□ 0.05
GGA3-220ENST00000613421 LINC00301Q8NCQ3 95 aa15.36■□□□□ 0.05
GGA3-220ENST00000613421 CCDC77Q9BR77 488 aa15.36■□□□□ 0.05
GGA3-220ENST00000613421 EEF2P13639 858 aaKnown RBP15.36■□□□□ 0.05
GGA3-220ENST00000613421 GJC1P36383 396 aa15.36■□□□□ 0.05
GGA3-220ENST00000613421 INF2Q27J81 1249 aa15.36■□□□□ 0.05
GGA3-220ENST00000613421 C11orf57Q6ZUT1 292 aaPredicted RBP15.36■□□□□ 0.05
GGA3-220ENST00000613421 INCENPQ9NQS7 918 aa15.36■□□□□ 0.05
GGA3-220ENST00000613421 DNM3Q9UQ16 869 aa15.36■□□□□ 0.05
GGA3-220ENST00000613421 GTPBP6O43824 516 aaPredicted RBP15.36■□□□□ 0.05
GGA3-220ENST00000613421 EPHA10Q5JZY3 1008 aa15.36■□□□□ 0.05
GGA3-220ENST00000613421 RNF26Q9BY78 433 aaPredicted RBP15.36■□□□□ 0.05
GGA3-220ENST00000613421 PCDHA5Q9Y5H7 936 aa15.36■□□□□ 0.05
GGA3-220ENST00000613421 A0A1W2PRG0 241 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms